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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:986727..992443+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012826 ID=XLOC_012826|Name=XLOC_012826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5717bp|location=Sequence derived from alignment at sc0000049_pilon:986727..992443+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATGGAGATAAAAAGATGGCTCAGATTTGTGCTACTAGTTTTGAT
GTTGGTGTATGCGAGAGGATACAATATGGAGATAAAAGGATACAATAAGG
AGATGAATAACTCGGACAACGAAGACGACCCTTGCAACAATGCCATGAAT
GAATGTTTAGCAGAGGCTAAATGCCGAAAGAAATTGCAAAGGTAAGAGGA
GCGGTTTACATTAGTTTGATTTTGAGCAGAATAcgttaagggaagaaatt
ttggcggaaagaaattgaaattaatttgccaaaataaaataTTGCCCAAT
TTAATCTAATTTCAATTTAttctctatttctcctaaaagccctttttttc
ctctttttttcagctaaaatattgaacaaaaatgggtTGTTCGCCAAAAC
aaattccgccaaattgcaccaaaaatttcttctcttaataCGTTATTTAT
TGTATGCTTCGTCAGAGGTCTCTGTGAGTATTCCGTCTGTTTTACCGTCA
ATCCTGCGTGAAAAGGTCTCtgttaaaaaaagtgtttttgagAGGGTTCg
cgttttgaaaaatctcaaacttagaaactaaaaatgatataaagactttt
tacaagaataaatcttgaaattttccGCAGATATCGAGCATGACTGACGG
GGATAGATTTTTAACAAATATGAGAGCGAAAAGTGAAAGAGTTTTTCTCG
CGAAAGCCCAATAAAGAAggaagtacacgctttttttttataagaatagt
gtactttggctgagggtgagcattattcttatttttctatttttctaaac
aataggcctattgttctaactctgaaatctcaccctgatattcttataaa
aaaagcgtgtacattgTGAGGCAAATATCTTTGCGGGCGACAAGGGAACT
TTCGATCGAATTGAAATCGAATGCCGAAGGGATACAAATTTCGAGACACT
CTTTGAAAAGGATAAAAATCTTCATTCTTACAATGTTCACACAGTTTTCC
GAAGATTGTCTTGAAGATTCGAGCAGCTGTAAAAGAAGATGTCTCTCACT
CTGTTTAAGAAGAACTCATTCTGGAGGAGGGGCATCATTGTATTCACAAA
TTAACCAGCTAATGATCGCAAAAGAATTAACTTGTTTTGAATAAACGCCT
CTTATAGTTAAAATCTAATTCTTTGATCGTAGTTTTTATTATGTTGGGAG
TTTAGATATGTGTAGTGGGAGGGGAAAGAGAGTCGCCGGTGGGATGATCA
TTACTGTTACAACTGTCTcatattgaaaaagttgaaaaggtcCTGACGGT
TTATAAAATCTACATCTAAAGATGTCCGTCCCTCATCGACGGTGGAGGTT
GCGGGGAAGACCAAACCAGTGCGGAAATGTATTTTTGAAAGCAAGTGCAT
CCTGATTAATAAGTTGAAAAGGTACCCGACatcttaaataaaaaatgttt
tatcaaGGAAATAGGGGGCATAGCAAACCAACTTTCTCGGTTAAAAAAGC
CATATTTTGAACACTTTCACTTTAATACTATATGAAATCTTTTCGAATTC
ACACGAAATGAATCCCAAGAAAGCACTTGGAACTTATGCTAGATTCGGTC
TTGTTGTATTTCGTTCTTGCCAAGTTGTCAGACAGGGTTAGTGAAAGGGG
AAGATGTCTTAATCCGATAACGGATATACTTGTCTCGTATTGGGATTACT
TTTAATCCAGGGGCGGGATTGTTTTTTGATCCGTAAATTATGACTCGTTC
AAGAGAGAGTTTGTTTATGTTAAGTTGCACAAGCTTATTTGATCTGTCCC
TACTTCCCCTTTTACAAGATTTTCCCaagcaaatattttaattaGCTTTC
GTCATGAAATATTCAGTGTAAATGAATGCCCTTGTGTTAAAAGCTGCGTG
AAATGAGGATTGCCAACGAGTTCATAAGGGGCTTCACATGACGTCATTAG
TGTCCGAATTTCATCGCATTCAAGCGCTCACAAACAAAAATTCAGACCCA
ATCTCTTTGCAAATTCAGGTCTGATAGATAAACAGTGGAGTCTTTATggc
tcgaacacgcacggggaatacaaatttgttcgagttaaggaaatttcgag
ttatggagattggtttataaggcatttttaATTGAAGGGGCCAGAAAACT
TGATCGAGTTgaggagatattcgagttatagaggttcgagttaacaAGAT
TCTATTATATTTAATAGAAGAGTACGAgatgtcatttttttttctaaaga
aagggAACACTTTATTCCGAAGAGATTCTGAAAATTTATGacttcaaaac
aacaaaacaaaatttgtttacaAGATGCAATTGCGTTAGTgctattgttt
actttgttgACATGCTCCATTTCGTCTCGAAAATTGGGAGACTGAGTATT
TCGTCATCACATCTCGTGGTCAAGGCTTATTCAACATTTTCCCATGAATA
GAAAATATTGTGCCTTAAAACAGACATGTTATTTTTCTATACTCCCAATT
ACGTATTTATTTATGCTGTAATACgagaaaaagctgaaaaatagtCAGGG
AGGCAGCCAAAGATAGTCAAGAACGATCCATTAGACATGGTTTTTGTGCG
ATTTCCTAAGAAGAAAAGTTGGGTATTTCGTCCataaagcctttaaatgt
tcttaacttgttcttaattttttggcaatctaagccttatgttcttacta
TAATATAACGTTTGTTTttacaacaagtgatacttttatggacctaccta
gttatgcatttaacacatatataattgatatctacgtgagcatgagcgtg
accgttaaacaatcattcagaacacaaatagtgacgatctattaaaatta
gtcgtttgtttcttataaaaaaaacgtttaaaaaccaaaatttcatgctc
ttgaaatattctttcatatattcaagactttgtgagcaaaaaaatatctc
tcatcaaaaaattgagtgatttggctaagaacattgatgtatgcttatca
atagtgattcttatagataaacatgcgcatttgagccaacaaattctttt
tgaaaaaatctacttgagccatcttttacctatgatggtaccctactttc
atgcaaaaaatcagaaaaagttaatgattcaatttttcacaaagtccaaa
aaacccgttctttagccgttttttggcccaaatttgccccccaattattt
tttttttgaaagtcaggctccgtcacattcgagggtttatagttatgcat
ctttgtgcaaaaaatcataaagaatcaaaGAggcaatctcgagaaaagct
aatacctaggtaattgataatgtgcttataaataaatatcgaatttggtc
agtttttctataaaaacacgccaagcaaccaaaatttcatttctaaacac
acacattcttcaaaagtaagccctcatgagcaaaaaaacatctatctcat
aaaaaaattgagtaatttaactaagaacattgatgtatgcttattaatag
tgattcttatagataaacatgcattttttgagccaaaaatttttttttga
aaaaatctgcttgagccatcttttacctatgatggtaccctactttcatg
caaaaaatcagaaaaagttaacgaaccaatttttcacaaagtcctaaaaa
cccgttttttagccgttttttggcccaaatttgcccaaaatttttttttt
cgaaaatcgggctccgtcacatttgagggtttatagttacacatctttgt
gcaaaaaatcagaaaaaactaatgagccaatcacgaggaaagctaataac
gaacggacgaacggacaaaggttaatttataggacctccaccccaccggg
ggaggtccaaaaaacgtgtataaggcTGACTTCAACTAAGCATGTTAGTA
GGAAGATCTGTAGGTGATATTTTGCCCAAACGATAATGATTTAATCAATT
TCGACATCAGATGACCTTTAAAGGATTCTTTTTGGCAAAGTGACAATTCT
CTCAAAGTGTTGGTTATCATAGTAGTCAAATTGCGGTGTTTTGATTAGAT
GACTATCCTCTTGACGAACGATACACCCCAACATAATGGTTGTTGTGAGA
GACATATTTGAAGTGTGAGAGAATTTCTTTACGAGCTCAAACATGAATGA
ATATCTGTAAAGCAATCTTTAAGAAAGCCTGACGGGGAAATGTGTATGAA
TTGAATGTTCTaaaaaaaCTGTCAATGTATGGATCTCGTACCAAGAGACA
CGTTTTGATTTATTAATGGACGTGATATGTGATACTTGAgagctatcaga
atcataaaaaagtgagctAAGGAACTGGGTTCAAGTTTGTCAATAACATC
TCATGTTGAGGAGGCGTGACAACCAGAGGGTAAGCAATTTCGAGAAAATT
GAAGGCCACCagttttaaaagttcaaaatcaaGGAGCTCTACCAACGTGG
TAGACGAATCAAATTGTCTTCTTGGTAGAAAAACTTCTTGTAGTTGAGTT
AAAAAACGAGGGTGTAGCTTTATCAAAACAATCATACatttttatttctg
aaaaaGCCCGCTATCGATTTACGATTAATTTGATTTCTATAAGGTGTATC
GGTAAACTACTCTTGACTTAGAGAACTAAGGGAAAATGGATTTGAACGAA
ATAAAGAACAAATTGACGTCAATGCGCCAACAGATCACATTCTATGTACC
AAACATCATTCTAGAAGCGCTTAAGTGTAGACAAATCTCTTCGAAATGTC
AACAACATCTGTCTTGTTGATGTGTAAACAAATTTGACGATGATGGGGTA
GGACTTAGTATGTGTGAGAGCAAGAGAGTAAATGAGCAAGCGAGTGATTT
GATGGATGAACGAGCGATATTGGATTTATTTAGTTCTTTCTCTTTCGTCT
TACGAATATAATTTGATGAATTATCAGAGTGAAATGACGAGTGCACGCAT
AGgcgagtgagtgagtgagtgcgtgagtgagagagtTGTTGACACtatct
aattcgacgttctactaaaCGAtcacgctccattattcgatgataCTGAA
AGTCGCCATCAACAAAAACTTTCATAAACGACGCTTTACTATTCGATGAA
AAtgcaattccccttgaaaattgaatcagAGAGCGTCAACGGTACTTATT
GATCGatcgattttctttttttacagatTGCGAGACACATGCAAGGACTT
GTTCAGTAATTTCAACTACATGTCAAGCGAGTCATCAAAAATCTCTTGCT
CACCTCAATGTCGACGACGTCTCATCAACGCAAAGAAACATTATCAGTTG
AAAACCCTCTTAACgtgcaaaacaaagaaaagttattttttcccTTACCA
AGAGCGAGCTGAACGATGCATTGCTGGTAAAATCGATGCTAAAGTCCACG
AAAATTTTGTCCAAGATGGTTGTTCCAATGTTTTTCAAGATTGTATGAAA
TTTCACCGGTGCCGTAAGCGTTACCAGCGAATGATGTTTGAATGTTCTGA
AATGGTAAACGGACAGAAATGCACAACAACGTGTGAAAAGAGCctaaaga
aatttttagtcTCTCAACACATTTCAGGATTCTATCAATGTCGGTGTGAT
GGTGCCATCTATTTTCAACAGACTTGCCATTCCTTGAAACAGAACATTTT
GAATTTGTGtgtttcaaatcaattcaaagGATTTTTGAGTAAAAGAGAAT
TATTACTAATCAAATGA Coding sequence (CDS) from alignment at sc0000049_pilon:986727..992443+ >XLOC_012826 ID=XLOC_012826|Name=XLOC_012826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1464bp|location=Sequence derived from alignment at sc0000049_pilon:986727..992443+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATGGAGATAAAAAGATGGCTCAGATTTGTGCTACTAGTTTTGAT
GTTGGTGTATGCGAGAGGATACAATATGGAGATAAAAGGATACAATAAGG
AGATGAATAACTCGGACAACGAAGACGACCCTTGCAACAATGCCATGAAT
GAATGTTTAGCAGAGGCTAAATGCCGAAAGAAATTGCAAAGATGATGATG
GAGATAAAAAGATGGCTCAGATTTGTGCTACTAGTTTTGATGTTGGTGTA
TGCGAGAGGATACAATATGGAGATAAAAGGATACAATAAGGAGATGAATA
ACTCGGACAACGAAGACGACCCTTGCAACAATGCCATGAATGAATGTTTA
GCAGAGGCTAAATGCCGAAAGAAATTGCAAAGatTGCGAGACACATGCAA
GGACTTGTTCAGTAATTTCAACTACATGTCAAGCGAGTCATCAAAAATCT
CTTGCTCACCTCAATGTCGACGACGTCTCATCAACGCAAAGAAACATTAT
CAGTTGAAAACCCTCTTAACgtgcaaaacaaagaaaagttattttttccc
TTACCAAGAGCGAGCTGAACGATGCATTGCTGGTAAAATCGATGCTAAAG
TCCACGAAAATTTTGTCCAAGATGGTTGTTCCAATGTTTTTCAAGATTGT
ATGAAATTTCACCGGTGCCGTAAGCGTTACCAGCGAATGATGTTTGAATG
TTCTGAAATGGTAAACGGACAGAAATGCACAACAACGTGTGAAAAGAGCc
taaagaaatttttagtcTCTCAACACATTTCAGGATTCTATCAATGTCGG
TGTGATGGTGCCATCTATTTTCAACAGACTTGCCATTCCTTGAAACAGAA
CATTTTGAATTTGTGtgtttcaaatcaattcaaagGATTTTTGAGTAAAA
GAGAATTATTACTAATCAAATGAatTGCGAGACACATGCAAGGACTTGTT
CAGTAATTTCAACTACATGTCAAGCGAGTCATCAAAAATCTCTTGCTCAC
CTCAATGTCGACGACGTCTCATCAACGCAAAGAAACATTATCAGTTGAAA
ACCCTCTTAACgtgcaaaacaaagaaaagttattttttcccTTACCAAGA
GCGAGCTGAACGATGCATTGCTGGTAAAATCGATGCTAAAGTCCACGAAA
ATTTTGTCCAAGATGGTTGTTCCAATGTTTTTCAAGATTGTATGAAATTT
CACCGGTGCCGTAAGCGTTACCAGCGAATGATGTTTGAATGTTCTGAAAT
GGTAAACGGACAGAAATGCACAACAACGTGTGAAAAGAGCctaaagaaat
ttttagtcTCTCAACACATTTCAGGATTCTATCAATGTCGGTGTGATGGT
GCCATCTATTTTCAACAGACTTGCCATTCCTTGAAACAGAACATTTTGAA
TTTGTGtgtttcaaatcaattcaaagGATTTTTGAGTAAAAGAGAATTAT
TACTAATCAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:986727..992443 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 193-732:5178 |
| Aaloc | 1-189:1 |
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