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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000202_pilon:465364..467305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012726 ID=XLOC_012726|Name=XLOC_012726|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1942bp|location=Sequence derived from alignment at sc0000202_pilon:465364..467305- (Clytia hemisphaerica_ch_hm2_pilon)
CTTGAAAAGAACAGTATTGCCATAAATGATAATCTTTGCTCTGATCTAAC
AGCTATAATTGGAAAACAAGAAAAACTTACTCCATTTATGGAATTATTTT
GGCAAGAGCAAAAAACATTATTCCAAAGGTCTAAATCTGGAGTACGTTTC
CACCCTATGCTGATACGTTACTGTCTCTCGTTGGCTGCAAAATCACCTTC
TTGTTATAAAGAAATAAGAGATAGTGGAATTCTAAAACTGCCCAGTGAGC
GTACTTTACGGGACTACAGAAATGTCATCACCCCAAAAGTTGGCTTTAAC
CCGGCTGTAACAGATGAACTCATTTCCTTAACTAAAACCTACACAGCTGA
TCAGCGGTTTGTTACACTGTTGATTGATGAGATGAAAATCAAATCAAACC
TTGTCTTTCAAAGGAGTACAGGAGAACTGGTTGGATTTATGGACCTGGGA
GACCCTGATCTAAACTTTGCGTCAATCGACAAAGAACACCAAGATGATTT
GGCTTCATATGCATTGGTATTTATGCTACGTGGAATAACGTCCAACTTAA
AGTTTGGATTAGCATACTTTGGTACAGCTGGAGCCACTGGACCACAGATG
TTTTCCCTGTTCTGGGATGCAGTTGCCATTGTTGAGTGCTCGTGTAACCT
TAAACTTGTCGCAGTGACTGCTGATGGTGCATCACCCAATAGAAAACTGT
TTAATATGCACAAAGGTAAATATAGTTCTATAAAATAGTTTGGATATAAT
AACTTCCATTTCGAAGCTCTATCCAAGATGGGGTACAGTTCTGCTCTGGG
TTTACTATGATCAAGTACATAATTCTTTTGGAGTTTGGAAATTAACAAAT
TTTTCAAGTTTCAGAATTCCAATCTTCATAGTTTTTCAATATTGTCTATG
TATATGTCCTTCTTTTTAAGGCTTCGTGGACATAGCAGAGGAGATATCAA
GCAGCGACCCTATCGATTTCAATGTAGACTCAATGAATGAAGCCACTCTC
GAGATGTTGCCTGAAGAAACCTTTGATCAGTGGCTGGAAAAGATGATTGA
CGAGAGTGTTGTATACAGGACAATCAACCTTTTTGCAAGGGATCGTTTTA
TTTACTTCTTCTCTGACACACCTCACTTGATCAAGACAGTGCGTAATTGT
CTTTATTCTTCCGGTGACGAAAATTACACACGACAAATGTGGAAGGACGG
AGATCACCTAATGTGGCAGCACATCAAAAACGCTTACACGAAGGATGCCG
AAAAGGAGATTAGGTATCTCAATAAATTAACACTAGAGCACATCAAACTG
ACTCCTTACTCAAAAATGAGGGTCAACCTAGCAGCTCAGGTACTCAGCTC
ATCAATGAGCAAAATCTTGAGAAAAGATTTTCCAGAATACAAGGAGACAG
CCAACCTTTGTGAATATATGGATGCCTTTTTCGATTGTTTGAACGTTAGG
AGTATGAATGAAGGCAAATTTGTGTTAAAGCCCAACCTTTTACCCTACCG
TTGCCCTGATGATTCGAGGTTCAAGTGGTTGATTGAACACTTTCTTGGAT
TTTTCAAGAATTGGGAGGCTTCAATTGAGAAAAGGCAGGGTGAATTCAGC
AAAACGGAAAAGTCAAAAATGCTGATTTCCTGGCAAAGCTATGAAGGATT
AAAACGCACATGCTATTCAGTTATTCATGTCACAAGATTTTTGCTAGAAG
GCGGAGTAAAGTGTGTTCTCACAGAGAGATTTTGTCAGGACACTTTGGAG
CAGTATTTTGGCAACCACCGCCAACATTGCCGTAGGAGTGAAAACCCTGA
CATGCTCATGTTTGGTTACAATGCTAATGGTTTACGTATTCAAAAAACTA
TTTCCTGTCATACTGGAAATAATGCAGGTCGCAAAGATAACAAACGCTCC
TGGGAAGGAGTGTCTGATGAACCTTTGAAACGAAGAAAGTAA Coding sequence (CDS) from alignment at sc0000202_pilon:465364..467305- >XLOC_012726 ID=XLOC_012726|Name=XLOC_012726|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3474bp|location=Sequence derived from alignment at sc0000202_pilon:465364..467305- (Clytia hemisphaerica_ch_hm2_pilon)
CTTGAAAAGAACAGTATTGCCATAAATGATAATCTTTGCTCTGATCTAAC
AGCTATAATTGGAAAACAAGAAAAACTTACTCCATTTATGGAATTATTTT
GGCAAGAGCAAAAAACATTATTCCAAAGGTCTAAATCTGGAGTACGTTTC
CACCCTATGCTGATACGTTACTGTCTCTCGTTGGCTGCAAAATCACCTTC
TTGTTATAAAGAAATAAGAGATAGTGGAATTCTAAAACTGCCCAGTGAGC
GTACTTTACGGGACTACAGAAATGTCATCACCCCAAAAGTTGGCTTTAAC
CCGGCTGTAACAGATGAACTCATTTCCTTAACTAAAACCTACACAGCTGA
TCAGCGGTTTGTTACACTGTTGATTGATGAGATGAAAATCAAATCAAACC
TTGTCTTTCAAAGGAGTACAGGAGAACTGGTTGGATTTATGGACCTGGGA
GACCCTGATCTAAACTTTGCGTCAATCGACAAAGAACACCAAGATGATTT
GGCTTCATATGCATTGGTATTTATGCTACGTGGAATAACGTCCAACTTAA
AGTTTGGATTAGCATACTTTGGTACAGCTGGAGCCACTGGACCACAGATG
TTTTCCCTGTTCTGGGATGCAGTTGCCATTGTTGAGTGCTCGTGTAACCT
TAAACTTGTCGCAGTGACTGCTGATGGTGCATCACCCAATAGAAAACTGT
TTAATATGCACAAAGCTTGAAAAGAACAGTATTGCCATAAATGATAATCT
TTGCTCTGATCTAACAGCTATAATTGGAAAACAAGAAAAACTTACTCCAT
TTATGGAATTATTTTGGCAAGAGCAAAAAACATTATTCCAAAGGTCTAAA
TCTGGAGTACGTTTCCACCCTATGCTGATACGTTACTGTCTCTCGTTGGC
TGCAAAATCACCTTCTTGTTATAAAGAAATAAGAGATAGTGGAATTCTAA
AACTGCCCAGTGAGCGTACTTTACGGGACTACAGAAATGTCATCACCCCA
AAAGTTGGCTTTAACCCGGCTGTAACAGATGAACTCATTTCCTTAACTAA
AACCTACACAGCTGATCAGCGGTTTGTTACACTGTTGATTGATGAGATGA
AAATCAAATCAAACCTTGTCTTTCAAAGGAGTACAGGAGAACTGGTTGGA
TTTATGGACCTGGGAGACCCTGATCTAAACTTTGCGTCAATCGACAAAGA
ACACCAAGATGATTTGGCTTCATATGCATTGGTATTTATGCTACGTGGAA
TAACGTCCAACTTAAAGTTTGGATTAGCATACTTTGGTACAGCTGGAGCC
ACTGGACCACAGATGTTTTCCCTGTTCTGGGATGCAGTTGCCATTGTTGA
GTGCTCGTGTAACCTTAAACTTGTCGCAGTGACTGCTGATGGTGCATCAC
CCAATAGAAAACTGTTTAATATGCACAAAGGCTTCGTGGACATAGCAGAG
GAGATATCAAGCAGCGACCCTATCGATTTCAATGTAGACTCAATGAATGA
AGCCACTCTCGAGATGTTGCCTGAAGAAACCTTTGATCAGTGGCTGGAAA
AGATGATTGACGAGAGTGTTGTATACAGGACAATCAACCTTTTTGCAAGG
GATCGTTTTATTTACTTCTTCTCTGACACACCTCACTTGATCAAGACAGT
GCGTAATTGTCTTTATTCTTCCGGTGACGAAAATTACACACGACAAATGT
GGAAGGACGGAGATCACCTAATGTGGCAGCACATCAAAAACGCTTACACG
AAGGATGCCGAAAAGGAGATTAGGTATCTCAATAAATTAACACTAGAGCA
CATCAAACTGACTCCTTACTCAAAAATGAGGGTCAACCTAGCAGCTCAGG
TACTCAGCTCATCAATGAGCAAAATCTTGAGAAAAGATTTTCCAGAATAC
AAGGAGACAGCCAACCTTTGTGAATATATGGATGCCTTTTTCGATTGTTT
GAACGTTAGGAGTATGAATGAAGGCAAATTTGTGTTAAAGCCCAACCTTT
TACCCTACCGTTGCCCTGATGATTCGAGGTTCAAGTGGTTGATTGAACAC
TTTCTTGGATTTTTCAAGAATTGGGAGGCTTCAATTGAGAAAAGGCAGGG
TGAATTCAGCAAAACGGAAAAGTCAAAAATGCTGATTTCCTGGCAAAGCT
ATGAAGGATTAAAACGCACATGCTATTCAGTTATTCATGTCACAAGATTT
TTGCTAGAAGGCGGAGTAAAGTGTGTTCTCACAGAGAGATTTTGTCAGGA
CACTTTGGAGCAGTATTTTGGCAACCACCGCCAACATTGCCGTAGGAGTG
AAAACCCTGACATGCTCATGTTTGGTTACAATGCTAATGGTTTACGTATT
CAAAAAACTATTTCCTGTCATACTGGAAATAATGCAGGTCGCAAAGATAA
CAAACGCTCCTGGGAAGGAGTGTCTGATGAACCTTTGAAACGAAGAAAGT
AAGCTTCGTGGACATAGCAGAGGAGATATCAAGCAGCGACCCTATCGATT
TCAATGTAGACTCAATGAATGAAGCCACTCTCGAGATGTTGCCTGAAGAA
ACCTTTGATCAGTGGCTGGAAAAGATGATTGACGAGAGTGTTGTATACAG
GACAATCAACCTTTTTGCAAGGGATCGTTTTATTTACTTCTTCTCTGACA
CACCTCACTTGATCAAGACAGTGCGTAATTGTCTTTATTCTTCCGGTGAC
GAAAATTACACACGACAAATGTGGAAGGACGGAGATCACCTAATGTGGCA
GCACATCAAAAACGCTTACACGAAGGATGCCGAAAAGGAGATTAGGTATC
TCAATAAATTAACACTAGAGCACATCAAACTGACTCCTTACTCAAAAATG
AGGGTCAACCTAGCAGCTCAGGTACTCAGCTCATCAATGAGCAAAATCTT
GAGAAAAGATTTTCCAGAATACAAGGAGACAGCCAACCTTTGTGAATATA
TGGATGCCTTTTTCGATTGTTTGAACGTTAGGAGTATGAATGAAGGCAAA
TTTGTGTTAAAGCCCAACCTTTTACCCTACCGTTGCCCTGATGATTCGAG
GTTCAAGTGGTTGATTGAACACTTTCTTGGATTTTTCAAGAATTGGGAGG
CTTCAATTGAGAAAAGGCAGGGTGAATTCAGCAAAACGGAAAAGTCAAAA
ATGCTGATTTCCTGGCAAAGCTATGAAGGATTAAAACGCACATGCTATTC
AGTTATTCATGTCACAAGATTTTTGCTAGAAGGCGGAGTAAAGTGTGTTC
TCACAGAGAGATTTTGTCAGGACACTTTGGAGCAGTATTTTGGCAACCAC
CGCCAACATTGCCGTAGGAGTGAAAACCCTGACATGCTCATGTTTGGTTA
CAATGCTAATGGTTTACGTATTCAAAAAACTATTTCCTGTCATACTGGAA
ATAATGCAGGTCGCAAAGATAACAAACGCTCCTGGGAAGGAGTGTCTGAT
GAACCTTTGAAACGAAGAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000202_pilon | genome | sc0000202_pilon:465364..467305 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-1737:1021 |
| Aaloc | 1-714:1943 |
|
