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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000305_pilon:88487..90232+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012580 ID=XLOC_012580|Name=XLOC_012580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1746bp|location=Sequence derived from alignment at sc0000305_pilon:88487..90232+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCGCTTATCACAGtcaaattgttatttttattggtGATATGCGC
ATGCGTTGTATATTCAGTCGATACCACAAGTGATGCAAAAGCTCTGGAAG
AGTTGAACAAAAAGGACATTGAAAGTGAGATCAAGAgaagtttgaaaagt
ttgatcaCTCTAGCAAAAGAAAAGAAGTCAGTTGACGCCGAAGgcagcaa
agaaaaaaaatcaatcgaagtGGAAGCTACCAAAAAGGAGGCTGCTGCTG
CAAAAGATGAGAAGGCTTCTAGCAATAGTGCGGAAGGAGCAGGCATCACC
CTAGATGAAGCTAAACGACGTCTGGCAACCGCCCTGATCAAGGAAGCACG
CAAAGAAGTATCTTCCAGGATCCCATTTTTCTCCTCaaaaaaaTCCATGC
CGTTACTCCACAAGAAATCCGATGTTCCATATTTCCATAGTCGTGAGGCT
GCTGATATCCCTTTCTTTCATAAACGAAGAAGCATTCCATATTTTTCCAA
GAAGAGCACCATTCCTTACTTCCAACGCAGCGCAGCGATGCCgtattttt
ccaagaaaaacaCTATCCCATATTTTCAAAGAAGTATCGAAGAAATTCCA
TATTTTGCTTCAAGACGTGATAAAATTCCATATTTTGCTTCCAAAAAGGA
CATTCCGTATTTCAGCAAACGTGATATCCCATATTACGTAAGAAATGCAG
CTATCCCGTATTTCCAACGCCGGTCCATCCCGTATTACGCCAAACGAGAC
ACCATCCCATTCTACCATAAGCGGGAGACCATACCTTACTTTCAACGCAG
TGCTACCATCCCATACTACAGTAGGAAGGAGCTCCCATTCCATTTGGCAA
GACGAGCAACTAAAGAAGATTCTATCCCTTACTTTGCAAATAAAAAGGAC
AGTATCCCGTATTTTGCGAACAAAAAGTCAGAAATTCCCTATTTCTCCAA
AAAGAATTCGATTCCTTACTTCGCCAGCAAAAGAACGACATCAGAGGAAA
TTCCCTACTTCTCCAAAAAAGATTCCATCCCTTATTTTACAAGCAAGAAA
AGCGCAGAGGAGATACCGTTTTTCGCAAATAAAAAATCCGCCAGCGACGA
AGAAATACCGTACTTTGCCAACAAGAAATCTGCTGCGATTCCTTattttg
caaacaaaaaaaacgcTATTCCCTACTTTGCTAGCAAGAAAAATGTCGCT
GAAATTCCATATTTCGCGAGTAAAAAATCCGCCGAAATTCCATACTTCGC
CAACCGAAGATCAGCCGAGATTCCGTACTTTGCAAATAAAAAAGACAGCA
TACCTTACTTTGCAAATCGGAGGGATGCTGCAATTCCTTACTTCGCCAGC
AAAAGAACGGCATCAGAGGAAATTCCCTATTTCTCCAAAAAGAATCTGAT
TCCATATTTTGCTAACAAAAAGGATTCGATTCCTTATTTTGCAAGCAAGA
AAAGCGCAGAGGAGATACCATATTTCGCAAAGAAAAAATCTACATCGGAA
GAAAATATCCCATATTTTGCAAGCAAGAGATCCACATCAGCCTCTATTCC
CTACTTTTCGAGCAAAAAAGATATCCCATTCTTCCAGAGCACCCTTAATG
ATGATGATGCTACCTACTTCATGGATGCTAACCTCCAGGAATCATCAGAT
GCCTCCAAGAGGGAGACGGTTACCATCCCCTTCTTCCAAGACCAGAAGAG
GGCTACAGACAATGAAGAGTTCAACTCGATCCCTTATTTTCAATAG Coding sequence (CDS) from alignment at sc0000305_pilon:88487..90232+ >XLOC_012580 ID=XLOC_012580|Name=XLOC_012580|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2484bp|location=Sequence derived from alignment at sc0000305_pilon:88487..90232+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTATCGCTTATCACAGtcaaattgttatttttattggtGATATGCGC
ATGCGTTGTATATTCAGTCGATACCACAAGTGATGCAAAAGCTCTGGAAG
AGTTGAACAAAAAGGACATTGAAAGTGAGATCAAGAgaagtttgaaaagt
ttgatcaCTCTAGCAAAAGAAAAGAAGTCAGTTGACGCCGAAGgcagcaa
agaaaaaaaatcaatcgaagtGGAAGCTACCAAAAAGGAGGCTGCTGCTG
CAAAAGATGAGAAGGCTTCTAGCAATAGTGCGGAAGGAGCAGGCATCACC
CTAGATGAAGCTAAACGACGTCTGGCAACCGCCCTGATCAAGGAAGCACG
CAAAGAAGTATCTTCCAGGATCCCATTTTTCTCCTCaaaaaaaTCCATGC
CGTTACTCCACAAGAAATCCGATGTTCCATATTTCCATAGTCGTGAGGCT
GCTGATATCCCTTTCTTTCATAAACGAAGAAGCATTCCATATTTTTCCAA
GAAGAGCACCATTCCTTACTTCCAACGCAGCGCAGCGATGCCgtattttt
ccaagaaaaacaCTATCCCATATTTTCAAAGAAGTATCGAAGAAATTCCA
TATTTTGCTTCAAGACGTGATAAAATTCCATATTTTGCTTCCAAAAAGGA
CATTCCGTATTTCAGCAAACGTGATATCCCATATTACGTAAGAAATGCAG
CTATCCCGTATTTCCAACGCCGGTCCATCCCGTATTACGCCAAACGAGAC
ACCATCCCATTCTACCATAAGCGGGAGACCATACCTTACTTTCAACGCAG
TGCTACCATCCCATACTACAGTAGGAAGGAGCTCCCATTCCATTTGGCAA
GACGAGCAACTAAAGAAGATTCTATCCCTTACTTTGCAAATAAAAAGGAC
AGTATCCCGTATTTTGCGAACAAAAAGTCAGAAATTCCCTATTTCTCCAA
AAAGAATTCGATTCCTTACTTCGCCAATGGTATCGCTTATCACAGtcaaa
ttgttatttttattggtGATATGCGCATGCGTTGTATATTCAGTCGATAC
CACAAGTGATGCAAAAGCTCTGGAAGAGTTGAACAAAAAGGACATTGAAA
GTGAGATCAAGAgaagtttgaaaagtttgatcaCTCTAGCAAAAGAAAAG
AAGTCAGTTGACGCCGAAGgcagcaaagaaaaaaaatcaatcgaagtGGA
AGCTACCAAAAAGGAGGCTGCTGCTGCAAAAGATGAGAAGGCTTCTAGCA
ATAGTGCGGAAGGAGCAGGCATCACCCTAGATGAAGCTAAACGACGTCTG
GCAACCGCCCTGATCAAGGAAGCACGCAAAGAAGTATCTTCCAGGATCCC
ATTTTTCTCCTCaaaaaaaTCCATGCCGTTACTCCACAAGAAATCCGATG
TTCCATATTTCCATAGTCGTGAGGCTGCTGATATCCCTTTCTTTCATAAA
CGAAGAAGCATTCCATATTTTTCCAAGAAGAGCACCATTCCTTACTTCCA
ACGCAGCGCAGCGATGCCgtatttttccaagaaaaacaCTATCCCATATT
TTCAAAGAAGTATCGAAGAAATTCCATATTTTGCTTCAAGACGTGATAAA
ATTCCATATTTTGCTTCCAAAAAGGACATTCCGTATTTCAGCAAACGTGA
TATCCCATATTACGTAAGAAATGCAGCTATCCCGTATTTCCAACGCCGGT
CCATCCCGTATTACGCCAAACGAGACACCATCCCATTCTACCATAAGCGG
GAGACCATACCTTACTTTCAACGCAGTGCTACCATCCCATACTACAGTAG
GAAGGAGCTCCCATTCCATTTGGCAAGACGAGCAACTAAAGAAGATTCTA
TCCCTTACTTTGCAAATAAAAAGGACAGTATCCCGTATTTTGCGAACAAA
AAGTCAGAAATTCCCTATTTCTCCAAAAAGAATTCGATTCCTTACTTCGC
CAAGAAAAAATCTACATCGGAAGAAAATATCCCATATTTTGCAAGCAAGA
GATCCACATCAGCCTCTATTCCCTACTTTTCGAGCAAAAAAGATATCCCA
TTCTTCCAGAGCACCCTTAATGATGATGATGCTACCTACTTCATGGATGC
TAACCTCCAGGAATCATCAGATGCCTCCAAGAGGGAGACGGTTACCATCC
CCTTCTTCCAAGACCAGAAGAGGGCTACAGACAATGAAGAGTTCAACTCG
ATCCCTTATTTTCAATAGAGAAAAAATCTACATCGGAAGAAAATATCCCA
TATTTTGCAAGCAAGAGATCCACATCAGCCTCTATTCCCTACTTTTCGAG
CAAAAAAGATATCCCATTCTTCCAGAGCACCCTTAATGATGATGATGCTA
CCTACTTCATGGATGCTAACCTCCAGGAATCATCAGATGCCTCCAAGAGG
GAGACGGTTACCATCCCCTTCTTCCAAGACCAGAAGAGGGCTACAGACAA
TGAAGAGTTCAACTCGATCCCTTATTTTCAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000305_pilon | genome | sc0000305_pilon:88487..90232 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 979-1242:1483 |
| Aaloc | 1-975:1 |
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