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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1103864..1107540- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012429 ID=XLOC_012429|Name=XLOC_012429|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3677bp|location=Sequence derived from alignment at sc0000049_pilon:1103864..1107540- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACGAAAGTGTATTTTAACATACCTGTGCATAAGATCTCATGGAA
TCGACAATTTCTTGGAAAAAAGATGGCGATGGCAGGATTGACCAAAAGTT
CGAAATGTGTCCCAAAATTTGGAAAAATCGCTAATTTCAGAGTGATTTCA
CAAAGCTATTCGGTGAATACAGTTCAAAACCTTGATGTAGAACTTATTGA
AACTGCTGAAAAAGTTGAAAAGGGAGTTCCTTTCTTGTTTTTACCTCACA
CTGTCAAGAAAGCTTACAATGTTAAAAGTGGGGTGACAACATCTTTGCCA
CAAGTTTTTGATAAATATAAATGGCTGACAAAGACTCTTTCTTCACCGAA
TATACCTGAAGATATCTTATCAAATAATGAATCAAATTTTGACGAGTTTA
AGCTTTTATTACATGATTCATTGGCGCAAACCACAGCTTTCCAAAAAACG
CCAAAAAACAAAGATGACAAACGATTCCGCCAAGAGAGGATGGTAAACGG
GATATTTTCAAACTTCTTACGCTTATCCATGGTCAAAAACAACTCTAAAG
CTCATTTAAAACCTGGAAACTTTTATCTTCTCAATAAAACACAACTTGAA
AGCCATTGGGTTCGAAATTACAAGTTTTATCAGACCCAAATTCGCCCTAC
CTACACTTTGAAGACCCAAAATCCACTTGCCATTATTGAAGAACCAAATG
GTAAGCTTATTATTGATCTCTTTATGTTAGGTTAATAAATATTCACAAAT
TTTAGCGTCAATTGAATAGGCTTGACTCAGTTCTGCATACCGTGAAGTCG
GGTCCGCTAAGTCTGAGGACCCTGCCGACGCACCGGACTGTCCGGTGGCA
AAAAGTATCCTTTCGCTACACCGGACGCAATAAGTCCGGTGTCAGTCCGG
TGTTGCATACAGGGAATTTTGGACGCCGGACATTTATGAAAAAAAAAATT
AAGAAACACCCGACCCACCGGACTGGCCATGTCCTGTGTTTTGATTGTCC
GGTGGGAAAAATATCCTTCTCCAACACCGGACATCCGACTTCCTTAAGTC
CGGTGTAGAAATTGTCCGGTGGTAAACAAAATTCTCATTTTACACCGGAC
TTTCGCGTGTCCGGTGTTCGTTAAGTCCGGTGCGTCGGCAGGGTCCTTAA
GTCTGCTAATTAAATTTTCGAAAATTTTCCACCCAGGACATTCTTATTCC
AACCCCCCCCCGCTTATTAATTTTTGGGAAAATGATTTTGAAAGTTCCCT
CTTTTGTCCTAATTCTGCTGTATCAGCCTCCTTTTCAAAAGTTTTCCACC
CAGGACATTTCTATTCCAGCCCCCCCCCGCTTATTAAGTTTTGAGATTTT
TTCCAACCCCCCTGCTTATTCCAACCCCCCGGCTACAGTATTAGGTACAT
GAGAGTCAGTTAGTCACACTAGGAAATTAAGCTTTCAGAAAAAACAACAT
CAGTCATCTACAGGATACATTTCAACAACAAGGATGAGAGTTACCTGAAT
CAAGTTTGCAAGACAATATTAATTTAAAGTTGAAAGTTGGAAACAAAATA
AAACGTGCAGCAGCCAAAATCAACCAAAATCAACCAACCAAACTTTGTCA
TTCAATTCCCGAGACAGCGCATCCATTTTTTAAGGCTTTGTTTATACGCT
AAAGTAAAAACAATTTCGCACATGTAAATGGGTCATTGTTTGAGGTCCGG
CAAAATTTCCGGGAGATAGCCTATCCGGCGGTGCGCGGATCTAGGTGGGT
TCCGCCTCCCCCGTAGATCTTTTTCTTGGGAAGTTGTTCTTCAAGTTAGT
TTTCAAGGTTGGCTTGGCTCAAATTTTTTCTTCTATGGCTCAAATTTTAG
GCAATTTCTCAAGGTTTTTGAAAATGTTGATTTCATTAAAAAGCGCCGGG
TTATTTTTTCACGAATCCCTTTAGAAGTTTTGCGGCGCATTTTTTTGCTT
GAGAGTCAAGTAAACGATATAGCGGTTTCGCAGCATTAATCTTTGATACT
CATTTTGGCGGGACGCTAGTGTGACTAACTGAGAGTAGCTTGCATCAGTG
GAGGGAAACTTGCATAGCCATCAAATGACTGACCAATCAAAGCAGCAAAA
TTTCCAAACAAATGAACTACACAGCTCCTCTCACAGCTCTTCTCTACCAT
TTTTGTTTTGATTTAACTTTGTATTTAATGACCAGCCAGGTCATTCACTT
GAGGGCTATGCATGTTTGCCTCCACTGATGTAAGTTACCCGATCTCCCGG
TATTAAACTGCTCTAGCCATTCGGGCTGGAAATTAACTGCTTGGTTGCTT
AAAAAATTAAGCCCTAATACTTTACAGGACATCAAGGAAGATTCACAGCG
TTATTGTATGCTCTTTCGGGAAACGTTAGAGTGCCAATTTGAATAAAACT
TTTATAGGGAAGTGTGTTATCTTTTGCATATCAAATTAGAGATACAAAAG
ATAACGTTCGTCTAAAAGAACTATGACCAGGAACTCAATCACTTCAAAAC
AGTTAAAAGACTTTTAGACGGGTATAGCCGATTTCATTACCTAACTCGAG
ATAATTCACGCAGAAGATGCAATTTTTGGTCAATTTTAGACCAAAATGTG
GTGAAAAGTGGAACTTGCGCATGAAATATCTCGAGTTAGGTAATGAAATC
GGCCATACCCGTTTAAAAGTCTTCTGTATAGTTTTTTGAGAGCTTTCGAA
TGGTATACATGATGTTGTCTCAAAAAGAGTTTGAAATTTTCAAAAATTTT
TGACCTTAGGGTTTTGCCTGGGGAAAAAAGAAATTGCCCAAAAAAGGGAT
GTTCCACCAGTGGGATTTTAAGGGATTTTTTCCTGGGGCATAAGCATCCT
ATAGAGAAGGTCTGGAGAAAGCTTCAGCTATATATTATTTTTTTCCTGTA
AATTATGCTAAACGACCCCACTAATAGTGTTGTGAGTAAACACAAGATTT
TCCATATCTTTTTTGAAAAAACTTTTTTCTAATCTCATGTGGCTATCCTG
AAAAAAAACTCGTAAAAGTTGGTATGATTCTCTTGCAAAACGACAGCAGC
TTCCAACAGAAGCGGCTAATTGATTGATTTATTTTACTGCAAGCTGATAT
GCTAGCTATTCTCAATTTGCCTTCTCTTTTTCTTTCATTAACAGAGATTC
ACCCGTTAGACATCGAGAGGATACCCGGACCGTTTGATCCTTACGCAATG
AATTTGTACCGACATCCAGTAGTTCATTTGACCAGTAGACCAGCATTGGA
TAATTCACGTTATTCACAATACCACCATTGTCATACCTCAATCGCTATCA
ACAATAGATTGCGAACGGATGAGCAGATCTACTCGCTTGGTATGTTCACC
ATGTTTGCACAACTTTCTGCGCAGGCGCAAGCGAATGGTGTTCTCCAGGG
GACCAATCTAGATCAACCTTTAGTCACGCAATGTATCGTCTCTAACGGAC
ATCTGATCAGCTTCATGATGTATCAACTGAACACTTTGAACATGTTGACG
GATAAGGGTGTATGGAACCGATGTTGGTACACACCATCTATTGGAATGTT
TGAACAAAACAATGAAGCAAGCCATGGACGAATTTACGAAGAAGCTTTAC
CACAAGACATTTTGGAGGGCTTTAGTGACGATTTACCGAAACATTTTCAT
GCTTTTATTGGTAATGAAACTGTTTAG Coding sequence (CDS) from alignment at sc0000049_pilon:1103864..1107540- >XLOC_012429 ID=XLOC_012429|Name=XLOC_012429|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2466bp|location=Sequence derived from alignment at sc0000049_pilon:1103864..1107540- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACGAAAGTGTATTTTAACATACCTGTGCATAAGATCTCATGGAA
TCGACAATTTCTTGGAAAAAAGATGGCGATGGCAGGATTGACCAAAAGTT
CGAAATGTGTCCCAAAATTTGGAAAAATCGCTAATTTCAGAGTGATTTCA
CAAAGCTATTCGGTGAATACAGTTCAAAACCTTGATGTAGAACTTATTGA
AACTGCTGAAAAAGTTGAAAAGGGAGTTCCTTTCTTGTTTTTACCTCACA
CTGTCAAGAAAGCTTACAATGTTAAAAGTGGGGTGACAACATCTTTGCCA
CAAGTTTTTGATAAATATAAATGGCTGACAAAGACTCTTTCTTCACCGAA
TATACCTGAAGATATCTTATCAAATAATGAATCAAATTTTGACGAGTTTA
AGCTTTTATTACATGATTCATTGGCGCAAACCACAGCTTTCCAAAAAACG
CCAAAAAACAAAGATGACAAACGATTCCGCCAAGAGAGGATGGTAAACGG
GATATTTTCAAACTTCTTACGCTTATCCATGGTCAAAAACAACTCTAAAG
CTCATTTAAAACCTGGAAACTTTTATCTTCTCAATAAAACACAACTTGAA
AGCCATTGGGTTCGAAATTACAAGTTTTATCAGACCCAAATTCGCCCTAC
CTACACTTTGAAGACCCAAAATCCACTTGCCATTATTGAAGAACCAAATG
ATGAAAACGAAAGTGTATTTTAACATACCTGTGCATAAGATCTCATGGAA
TCGACAATTTCTTGGAAAAAAGATGGCGATGGCAGGATTGACCAAAAGTT
CGAAATGTGTCCCAAAATTTGGAAAAATCGCTAATTTCAGAGTGATTTCA
CAAAGCTATTCGGTGAATACAGTTCAAAACCTTGATGTAGAACTTATTGA
AACTGCTGAAAAAGTTGAAAAGGGAGTTCCTTTCTTGTTTTTACCTCACA
CTGTCAAGAAAGCTTACAATGTTAAAAGTGGGGTGACAACATCTTTGCCA
CAAGTTTTTGATAAATATAAATGGCTGACAAAGACTCTTTCTTCACCGAA
TATACCTGAAGATATCTTATCAAATAATGAATCAAATTTTGACGAGTTTA
AGCTTTTATTACATGATTCATTGGCGCAAACCACAGCTTTCCAAAAAACG
CCAAAAAACAAAGATGACAAACGATTCCGCCAAGAGAGGATGGTAAACGG
GATATTTTCAAACTTCTTACGCTTATCCATGGTCAAAAACAACTCTAAAG
CTCATTTAAAACCTGGAAACTTTTATCTTCTCAATAAAACACAACTTGAA
AGCCATTGGGTTCGAAATTACAAGTTTTATCAGACCCAAATTCGCCCTAC
CTACACTTTGAAGACCCAAAATCCACTTGCCATTATTGAAGAACCAAATG
AGATTCACCCGTTAGACATCGAGAGGATACCCGGACCGTTTGATCCTTAC
GCAATGAATTTGTACCGACATCCAGTAGTTCATTTGACCAGTAGACCAGC
ATTGGATAATTCACGTTATTCACAATACCACCATTGTCATACCTCAATCG
CTATCAACAATAGATTGCGAACGGATGAGCAGATCTACTCGCTTGGTATG
TTCACCATGTTTGCACAACTTTCTGCGCAGGCGCAAGCGAATGGTGTTCT
CCAGGGGACCAATCTAGATCAACCTTTAGTCACGCAATGTATCGTCTCTA
ACGGACATCTGATCAGCTTCATGATGTATCAACTGAACACTTTGAACATG
TTGACGGATAAGGGTGTATGGAACCGATGTTGGTACACACCATCTATTGG
AATGTTTGAACAAAACAATGAAGCAAGCCATGGACGAATTTACGAAGAAG
CTTTACCACAAGACATTTTGGAGGGCTTTAGTGACGATTTACCGAAACAT
TTTCATGCTTTTATTGGTAATGAAACTGTTTAGAGATTCACCCGTTAGAC
ATCGAGAGGATACCCGGACCGTTTGATCCTTACGCAATGAATTTGTACCG
ACATCCAGTAGTTCATTTGACCAGTAGACCAGCATTGGATAATTCACGTT
ATTCACAATACCACCATTGTCATACCTCAATCGCTATCAACAATAGATTG
CGAACGGATGAGCAGATCTACTCGCTTGGTATGTTCACCATGTTTGCACA
ACTTTCTGCGCAGGCGCAAGCGAATGGTGTTCTCCAGGGGACCAATCTAG
ATCAACCTTTAGTCACGCAATGTATCGTCTCTAACGGACATCTGATCAGC
TTCATGATGTATCAACTGAACACTTTGAACATGTTGACGGATAAGGGTGT
ATGGAACCGATGTTGGTACACACCATCTATTGGAATGTTTGAACAAAACA
ATGAAGCAAGCCATGGACGAATTTACGAAGAAGCTTTACCACAAGACATT
TTGGAGGGCTTTAGTGACGATTTACCGAAACATTTTCATGCTTTTATTGG
TAATGAAACTGTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1103864..1107540 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 703-1233:532 |
| Aaloc | 1-699:3678 |
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