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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1162204..1167873- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012428 ID=XLOC_012428|Name=XLOC_012428|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5670bp|location=Sequence derived from alignment at sc0000049_pilon:1162204..1167873- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATGCGAGGTATTCATGCAGACGTTGCAGATGTGTTTTGTTTGA
GAATGTCCATTTGGTTGGTGGCCACCACATCTCGACTGATTGCACGCTCT
ACTTGTTAGATTATACAAACCTGCCATTATGGATACAACAGGCTGTCGAA
AAGGTATGATCTAAATCGTATGTTTTTATGATTACAACGAGTACCAGTTA
AATTCCTCAGCTTTGATTGATTTGTTGATTGATTGATTTGTTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA
TTTGTACGACTTACATTTTACATTCAGGATTAGAGACACGATTTCCAAAT
ATAATTTCTATCATTTCAAAGTTAAACATTATTATTCACATTTAAAGGAC
ATTATTTAACGCATCTCCTACCATTTGCTTACTCAGCATTTTTAAACAAC
TTTCTACCTTCCCACCCGGCGCTTTTGAGAAATTCTTTGGTTTATTCTAC
TTTATCATAACAAGAGGGTACTCCTTTTGGGACAAGCTGGAGTTTTTACA
AGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAATCTTAT
TACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTAAATGACCAATTAG
TGGAGTATTTTGTAAAAACTCCAAGGCATCTCCTCCTTTTCTATATTATA
AAGAAGAATTATTTAATCATTTAGTATGCCTGGCTATTATTTTCTCACTT
CCCCCAGGGTTATTGGACGAAAGGAAAACTACACTGTCCCGAATGTGAGT
CGCGGATTGGAGCATTCAACTTTGTCAATCTCATCACATGTGGATGTAAC
CAAGATGTTTCACCGGCTGTTTATTTCGTCAGAAGCAAGTTGGACGAGAA
GATCCCACATACAATTTACGAGCAAAGTTTTGAACTCTCACAAAGTTTCT
CCACTATTGCATGTGAAGGTTTGGTCGAAGATGATAATGGTAAGCACAAG
ATTATCTCTAACGTTTTAGTACCTCGCACACACGAAGGCCTCATAATTCT
AATTTGAAAATGGGCCATTCCATTTTATATCCATACATGGGGGTGTACGA
ACATTTCTAGAGGGTAATCCGAGAAAAATTTCTAGGAGTTTTTGGACCTA
CCCCGGTGGGGTGGAGGTCCTATAAATTAACCCATGTTCGTTAGTTAGTT
AGTTAGTTAGTTCGTTCGTTAGTTACCAACTTTTCTCGAGATTGGCTCAT
TCAATTTTTCTGATTTTTTGCACAAAGGTGCATTACTATAAACCCTCGAA
TGTGACGGAGCCCGATTTTCGAAAAAAAAATTTTCCGGCCGGTAGAACCG
GAAATGTCCCGAAAAAAGCGGTTTTTTGAGATTTTCTCGAGATTTTATCA
TTAGTTTTTTGCGATTTTTTGCACATAGATGCACATTAGCAATGCCGAAA
AGGTGTCGAAAACCGTTTGCCGAAAAAAAATTTTTTCCGGTCTGTAGAAC
CGGAAATGTGCCGGAAATCGTCGTTTTTTCACATTTCCGTCACACTTTTT
CAACTTATTTAATTGTTTCTTTACAGAAAAATGTTCCTTATGATGATTCC
CAAAACTTAGCATCGTTTGATTTCCAAAAAAATCATCCTTTGAATCCGGA
ACTCCTTAAAAATCGCCGGAACAGCCGAAAACCGGCGTAAAACGGTTTTC
CTTCATTTTTTCAACTTATACTCGACAGATTTTCATGATTTTTTGCACAA
TGATGTAAAATGGCAATGCCCAAAATGTGACAGAGCCCAATTTTCGAAAA
AAAAAATTTTCCGGCCGGTCCCGAAAAGAGTGGTTTTTTGAGATTTTCTC
GAGATTTTATCATTAGTTTTTTGCGATTTTTTGCACATAGATGCACATTA
GTACTGCCGAAAAGGTGTCGAAAACCGTTTGCAGAAAAAAAAATTTTTCC
GGTCTGTAGAACCGGAAATGTGCCGGAAATCGTCGTTTTTCACATTTCCG
TCACATTTTTACAACTTATTTAATTGTTTCTTTACAGAAAAATGTTCTTT
ATGATGATGCCCAAAACTTAGCATCGTTTGATTTCCAAAAAAATTATCCT
TTGAATCCGGAACTCCTTAAAAATCGCCGGAACAGCCGAAAACCGGCGTA
AAACGGTTTTCCTTCATTTTTTCAACTTATACTCGACAGATTTTCATGAT
TTTTTGCACAATGATGTAAAATGGCAATGCCCAAAATGTGACGGAGCCCA
ATTTTCGAAAAAGAAATTTTTCCAGCCGCTAGAACCGGAAATGTCCCGAA
AAAAGCGGTTTTTTGAGATTTTCACGAGATTTTCTCATTAGTTTTTTGGG
ATTTTTTGCACATAGATGCACATTAGTACTGCCGAAAAGGTGTTTCTTAA
TTGCTTTCTCCGTTCCAATAGATATATAAATCGAAATTTAAAATTATACA
TTACTTCCATTAAATTCTAATTATTCGTTTTATAAATAGGTAGGTCCATT
AAAGTATTACTTGTTTTTTTCATTTTTCCAAGGGGGTAAAAAGTTATTCT
AAAATTTCCACGGGGTAAAAGACTAATTTCAGTTCGTCCACCCTCACTAT
AAGGTATGAAAAGAATCTTTTCAAGGGTACTTTTGCAAATTTCACTATTT
TCCAGGGGGTATCGACACATTTTCAATATTTTTTTTTTGACTTGAAAAGT
CCCATATTCTTTATCCATCCTCACCTGATGGTTTTTTATGTCGGAACAGC
CCAATGCTTGAAGGAAAGTTTGTTTGGGATAATCTTAAATATCGAACCCA
ATGTACTAATACTTCTTTAGCTCCATCAAATCACAAAAATGATTTCAAGC
TACCCAAGATTGTAGATAATCAGTAGGCTCTCGTAAAGCCAAACTCACAT
TGGAATCTTTTTTCACTAATTAAGCCAATTCTCAGTTCCCTTCAAGTGGA
ATCCCTCGTAGAATGCTCTCAAAAATCGAAATTCGAGTTCGAATTAGCTA
GAGTTAATTTTTTTTTCTCGTACAAACGAAGGCAATGGTAGCAACTTAAT
GAACGACGAGAAGCCAACATCTCCAACAAAAACAAAAGAACTTTCAACAG
CAACATCATCAACAATCCAACGAAGGAATAGCTGTTCAACAATCTTTGAA
AATCAAATTTTTGACCCACAAATTCTTCCTATATACCCAGAGGTAACTTT
TATTTTCTTGTTGTACGAGCTTCGTGAATTTGATAATCATGTATAAAACG
GTACATGAAAATGTCTCTATCTAAAGAAGTACTTTAAGATATGTAAATCG
AAAGTCACAACATAAAAGGGGTTGCGGAACGAGCGTTCTGTTTTCGCAAA
GCGAAGAAATCTCAAAATGTACAAGAAATCGACTCCATTATTAATGTAGA
ATTAAAAAACAAACTAATAAGACCTTTACATTTCACCTAGAATTTATTTG
CGAGTCATAACAATAATGTCAAAGAAGAGGATGTTGGAAAATTAGAAGAC
AAAAAGTCATTTGTGCTCGATTTTGTAATACTTGTAGCTATAAATAAACC
TTCCTGATAAAAACCTCCCTGATAAGTGACGTCTCAGGTTCGTTTTTATC
GTTTCCTCGGGACGTCAAACCGAGACCTTTCCGTGATACTTCAAGCTACA
TATCTTAGATTACATCTGTGTAAAAAAAACACAGACTCTTCACGAAATGG
ACAGTTTTTTTCTTATCAAGCCTACTCAAATACTGCAAAGTATTACACGG
CATTGGGCTTTTCCAGAAAAAAACCGTGCACCCCCTGTTGAGGAGGTCCA
ACCTTTTGTGACCTACCCCTTTGGAATTCCAGGCAATTTTAGGATCATAC
CCCTCTGGAATTCCGAATTTTTACAAATTTTCAATCATTACCCCCTTGGA
ATTCCGCTTATTTTTGACGGATTTTCGTCTACCCTTATGGAATTCCACTG
CATTTCAAACCTTACCCCCTTGGAACGGAAATGGACCTCCTCAACAGGGG
GTGCACGATTTTTTTCTGGAAAAGCCCATTGGTTTAGAGAACCATTCTAT
GTTAAATCGGAGTAGAGCAATTTATCAATTATTATATCATCCTACGAAAA
ACTTCCCGAAACGGCTAGAGAGAAGTCATTTTGATATAATATCATCGACT
TCTACCGACATGTTTTTTCGGGAACTTTTCATCGATGGCGGGAGTACATC
GAGTAGTAGATTTTCAGATTTAGTCATCTGTTCATCCTCTAAGGAATTTT
ATTTGGAATATTTTTATAGGTTTATGACGATGAGGAGTTTAGCAGTTCCA
TTGTTCAACGAACCGAAGAAAACAGCCCATACGATGAAGTGCTCCTCACG
CAAAATAATCATTGTAAAAATTGTCGGTCATTGGATGAACAATTATTGAA
TAAGTCAACCAGTGGTTCGTCGAGTCATTTGTATTATGAAGTGAATGGGC
GTCAGACGAGATCTTCAATTACTATCTATGATAGTGGCAGGGGCGTGGAC
GATAGTGGTGGTGGTCATCAAAGGTATGCCCCATCATTTACCAAAATTTA
GTAAATGCTAAAAGTGAACCAATACTGAGAAATATAGTGAAGTTATATGC
ACTGAAGAAAATACAAACTAGCGGCTAACCATGACAATCTGTAACAAAAA
CCCGATATACATTTTGGAAGAAGAAAATAAAAAAAAGGAATGCACAAGAC
ACAAAAGGAAGTGATAAGCTGAAGACCGAAGTCTGAGAACAGATGCGGTA
CCTTGAGTAAGCACCTCCTGCCACTCAAGAGTCACCTGTCAGCTTAACAA
GAAGAAAGAAATTAAAACATAGGCACATAGGCAGTCTGACGAGATCTTAG
GGATCTTACTTTGAATTTGTTGTAATCTTGTGACTTTGAGGAATTGTGAT
AGTTGGTGTTCTACCTTTAACCAACTTGTCTTTATTACTAGCAGGGCGTG
TGGAAATTGCCGGACTCCAGACAAAATTATGAAAAGAGTGACATCAGATG
ATACAATGACGCAAAGCTTCAAGGTGATTTAATCATTTGATTTTCATAAT
TATCTCATCCCTGATTTCAAGAAACGAAAGCGTCTTTCGAAATTATTTCT
TTAGGGGGCAATTCGCCGGGGGATGAGGATTCTCGGTCTGAAAACACTAC
TGTATATGCAAACAAAAAGTTAAGGTCTCTGAAAGTTTTGCCTAAAAAAT
TCATTGCTCTCACTTTATTGCAGTGTACTTTCTCTCCTTTCTCTCCTTTC
AACATTTACAATGCATTTTGGGAAGCCTTATTAACGCACCCTTTAGTGCC
GCACATACGCTCATCTTTGGTGCCCTCCCCCCGGGCAATTGTCTAGGAGT
TTATTTTATTCGTACTAATTCATTTTATTAACAGGAGGAAGAAGAGCTGG
ACGACCAACATCAATGTCCGGTATGTTTAGATATCTTTTACGAACCACAC
CAAACGAAATGTCTTCATCTTTTCTGTGCACCATGTCTTCGTCAACTCTA
CAAATCATCCAATAAGAAACCACTATGTCCGCTGTGCAGATGCCGTATTT
ATCAAGTAGAACACCTGAAA Coding sequence (CDS) from alignment at sc0000049_pilon:1162204..1167873- >XLOC_012428 ID=XLOC_012428|Name=XLOC_012428|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000049_pilon:1162204..1167873- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATGCGAGGTATTCATGCAGACGTTGCAGATGTGTTTTGTTTGA
GAATGTCCATTTGGTTGGTGGCCACCACATCTCGACTGATTGCACGCTCT
ACTTGTTAGATTATACAAACCTGCCATTATGGATACAACAGGCTGTCGAA
AAGATGGCTGATGCGAGGTATTCATGCAGACGTTGCAGATGTGTTTTGTT
TGAGAATGTCCATTTGGTTGGTGGCCACCACATCTCGACTGATTGCACGC
TCTACTTGTTAGATTATACAAACCTGCCATTATGGATACAACAGGCTGTC
GAAAAGGGTTATTGGACGAAAGGAAAACTACACTGTCCCGAATGTGAGTC
GCGGATTGGAGCATTCAACTTTGTCAATCTCATCACATGTGGATGTAACC
AAGATGTTTCACCGGCTGTTTATTTCGTCAGAAGCAAGTTGGACGAGAAG
ATCCCACATACAATTTACGAGCAAAGTTTTGAACTCTCACAAAGTTTCTC
CACTATTGCATGTGAAGGTTTGGTCGAAGATGATAATGGGTTATTGGACG
AAAGGAAAACTACACTGTCCCGAATGTGAGTCGCGGATTGGAGCATTCAA
CTTTGTCAATCTCATCACATGTGGATGTAACCAAGATGTTTCACCGGCTG
TTTATTTCGTCAGAAGCAAGTTGGACGAGAAGATCCCACATACAATTTAC
GAGCAAAGTTTTGAACTCTCACAAAGTTTCTCCACTATTGCATGTGAAGG
TTTGGTCGAAGATGATAATGGCAATGGTAGCAACTTAATGAACGACGAGA
AGCCAACATCTCCAACAAAAACAAAAGAACTTTCAACAGCAACATCATCA
ACAATCCAACGAAGGAATAGCTGTTCAACAATCTTTGAAAATCAAATTTT
TGACCCACAAATTCTTCCTATATACCCAGAGGCAATGGTAGCAACTTAAT
GAACGACGAGAAGCCAACATCTCCAACAAAAACAAAAGAACTTTCAACAG
CAACATCATCAACAATCCAACGAAGGAATAGCTGTTCAACAATCTTTGAA
AATCAAATTTTTGACCCACAAATTCTTCCTATATACCCAGAGGTTTATGA
CGATGAGGAGTTTAGCAGTTCCATTGTTCAACGAACCGAAGAAAACAGCC
CATACGATGAAGTGCTCCTCACGCAAAATAATCATTGTAAAAATTGTCGG
TCATTGGATGAACAATTATTGAATAAGTCAACCAGTGGTTCGTCGAGTCA
TTTGTATTATGAAGTGAATGGGCGTCAGACGAGATCTTCAATTACTATCT
ATGATAGTGGCAGGGGCGTGGACGATAGTGGTGGTGGTCATCAAAGGTTT
ATGACGATGAGGAGTTTAGCAGTTCCATTGTTCAACGAACCGAAGAAAAC
AGCCCATACGATGAAGTGCTCCTCACGCAAAATAATCATTGTAAAAATTG
TCGGTCATTGGATGAACAATTATTGAATAAGTCAACCAGTGGTTCGTCGA
GTCATTTGTATTATGAAGTGAATGGGCGTCAGACGAGATCTTCAATTACT
ATCTATGATAGTGGCAGGGGCGTGGACGATAGTGGTGGTGGTCATCAAAG
CAGGGCGTGTGGAAATTGCCGGACTCCAGACAAAATTATGAAAAGAGTGA
CATCAGATGATACAATGACGCAAAGCTTCAAGCAGGGCGTGTGGAAATTG
CCGGACTCCAGACAAAATTATGAAAAGAGTGACATCAGATGATACAATGA
CGCAAAGCTTCAAGGAGGAAGAAGAGCTGGACGACCAACATCAATGTCCG
GTATGTTTAGATATCTTTTACGAACCACACCAAACGAAATGTCTTCATCT
TTTCTGTGCACCATGTCTTCGTCAACTCTACAAATCATCCAATAAGAAAC
CACTATGTCCGCTGTGCAGATGCCGTATTTATCAAGTAGAACACCTGAAA
GAGGAAGAAGAGCTGGACGACCAACATCAATGTCCGGTATGTTTAGATAT
CTTTTACGAACCACACCAAACGAAATGTCTTCATCTTTTCTGTGCACCAT
GTCTTCGTCAACTCTACAAATCATCCAATAAGAAACCACTATGTCCGCTG
TGCAGATGCCGTATTTATCAAGTAGAACACCTGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1162204..1167873 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 883-1068:187 |
| Aaloc | 802-882:629 |
| Aaloc | 547-798:1302 |
| Aaloc | 388-546:2538 |
| Aaloc | 154-384:4814 |
| Aaloc | 1-153:5671 |
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