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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1253159..1256063- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012424 ID=XLOC_012424|Name=XLOC_012424|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2905bp|location=Sequence derived from alignment at sc0000049_pilon:1253159..1256063- (Clytia hemisphaerica_ch_hm2_pilon)
ATCACCTATTTATCGATTTCCCCTGAATTCGGAAAATTGGACTGCGTTCA
TCAAAACAACAGGGCGGTATGCGGACTTCCTTGTCTCAAAAGCTATATAA
AACATGCAAAATTACCAATAGAAACATCTCAGAAGCTTCTTTTGGAAGAA
GAAGAAGATTTTTCTCTCTTTTGTACACATGAAGTTCTGAAGTTCTGTCA
CTTGACCAGGATGAGGACGTGGAAAAGTTTTTTGGTGTTGGTGTTTTGTG
TTTACACAGTACAATGTAAGTAACACTTGAAGAGTTTTTAAACCAATACC
TTAATCTAATTAATTTTCGAGCGCCTTTTATTTTCGCGTAGTGAACCTTG
TTTCTTGTTTCGCACCGGGGATTAACGTACTTTATCTAAAAATGTGTTTT
AGTATTTCGCCAAATGGCAGGTAGTTTAGGATTAGGTAGTTTCACAAGGC
AGCTCCTTAACCACTTAAAACCTTGACATGACACTCTTCGTAAAGTGATT
CATATTGGGTCCTTTTACCGAAATTTAACTCAACTTAAGCTTTTTACCTA
AAGCTCTACAGGTGCAGTAAATGCTTTATTCTTCATTTGACAGGTGATGA
ACAGCGAGACATTACACAACAAAATAATATTATTCAAGATGATGCTACAA
AACAACTGACAACAGCCGATGAAAATGTTGCTGACACTGCAGAAAGTACA
GCTGACGCTGTTGTAGAAAATACTGCTGACACTGCAGAAAATACTGCTGA
CCCTGCAGAAAACACTGCTGATGCTGCAGAAGAAAGTGCTGACACTGCAG
AAAATACTGCTGACACTGCAGAAGAAAATGCTGACGCTGCAGAAAATGAA
GAAGCAGCAGCAGATACATCAAAAGAAGAAAATGGCGAGCCAGAAAATGA
GGAAAATGACGCTGAAGAAGATGAACAAAAAAATGACGAAGTTATTGATA
AAGTTGAACAAGAAGATGACTTGGATGATGAAGAGGAAGACGAAACAGGT
ATGATTAAAATATACTTCTTTATTCATAAAGCTAGTCAATCGACTGAAAC
AATTTTTATCTCTTTTGATGGATTGTGAGAATCTTTTTTTGACTGACTGA
ATCTAAATGCATAATTAAAACGATCAATATTTCCCCTTTTTATAATTATA
TCGTTTAAGCATAATAAACTTTCAATGTAATACTTTGAAGGAAGTTCAAA
GAAAAACCTCAGGAGCTGAAGGGATTTTTTAAGCACCCAAACAGTCGTTA
TTTTGGTTATAATAAGAAAATCTCTAACAACTAAAGAATTATCAGCCACC
AGTTTCTAAAGTAGTGTCTCTATAACTCGAAAGCCCACGGGGAACGCAAA
TTTTTTGGAGTTAAGGAAATTTCAAGTTATAGAGTAAGGTTTATAAAGTT
ATTGTTAGTTGAAGGGCTCAGTAAACTTGTTCGAATTAAGGAGACATTAA
ATATTAAAGGTTCGGTATGATGATTTCATTGTATCTTATCACTACTGTTA
TATAGAAGCTGCAAATGAACAAGAAGATCCATCAACAAAAGAATCGACAT
CATCTTCGGACGAACAAGAAGAACAAAATAACGATGAAGATGAAGAAGAA
GACATTGAAAAAGATGAATTCTCAACTTTGTTGAAAAACGATGATGTTAA
TGCTCAAAAAGATGCAACAAGTACTTCAGGTAACTTCTATACAAATATAT
CTTGAAAATGTTTGAATGAATAGACTTTGTTGAAAAACGACGTTGCTAAA
TAAGACGTTGGTACGAGTACTTCAGGTAACTTGGGAGTGTTTGAATGAAT
GAATGAATGAATGAATGAATGAATGAATGAATGAATAAACAAATGAATGA
ATGGATGAAGACCATCTGTCTGATAGAGACAAAACCATATATATGATGAA
AGCAAATTGACTCTATCATGAATGCCACTGTCCCATTTCATCGGTTTCGT
CCCTTAAATGGTATGTTTTAAGTACATTCTGAAAATTTGAATTTGCAGAA
TTGAATTAGCCAGCTATTCTTAAGATTAAAACTTCTTTTTCAGCAGAATT
AGAAACAAAATCACAAACATCATTAGATGAAGAACAGGAACAAGACAACG
ATGAAGAAAATGAAAAAGATGAAGTTATCGAAAAAAATATTGCAGCAGAT
AGCACTTCTTCAGGTATCTTCATTATTATTTCGGTAACAATTCCAGATAT
GTTTAAAGTTCAAGATTTCTGAGACACAGTACGGAGTAATCTTGATAAAG
AGAGCTAGGGTAGGAGAAATATCAAACTTTCTTTCAAATATTGAACGGTT
TTTTGACAGAAATTATGATAGAACTCCAAAGTGGTTTATATACGACGAAA
GTTCTAAGCAGACTTTTAATGTTTTGATGCAAATCTTGTTTAAAGTTTTT
GACTTTAAATTTTCTATAAAAAATGAGGCGTCCTATAACGTCAAAAATAA
TTTTGTTTTTCGTATCAGACAAAAAATCAGACGCCTCGAAATACAAACCA
CGGAGACGTAGCCATCGCAGGAGACGTTCCCACCCCAGGAGACGTTCCCA
ACCAAGAAGACGTTCCCACCCAAGGAGACGTAGCCAACCCAGGAGACGGT
CCCACCCAAGAAGACGTTCCCACCCCAGGAGACGTTCCCACCCCAGAAGA
CGTACCCACCCCAGGAGACGTTCCCAGCCCAGAAGACGTTCCCACCCCAG
AAGACGTTCCCACCACAGAAGACGTTCCCAACCCAGGAGACGTATCCACC
CAAGACGTCGTATAGGGTTCCGAAGACGATTCCACCCCAGGAGACGTATC
CATCCAAGACGTCGAATCTTCCCAAGACGTCGAATCGGATTCCGTCGAAG
ATTCCATCCACGAAGACGTCTTGGCTTTCGCAGACGTTTTGGATTCCGTA
GGAGA Coding sequence (CDS) from alignment at sc0000049_pilon:1253159..1256063- >XLOC_012424 ID=XLOC_012424|Name=XLOC_012424|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2802bp|location=Sequence derived from alignment at sc0000049_pilon:1253159..1256063- (Clytia hemisphaerica_ch_hm2_pilon)
ATCACCTATTTATCGATTTCCCCTGAATTCGGAAAATTGGACTGCGTTCA
TCAAAACAACAGGGCGGTATGCGGACTTCCTTGTCTCAAAAGCTATATAA
AACATGCAAAATTACCAATAGAAACATCTCAGAAGCTTCTTTTGGAAGAA
GAAGAAGATTTTTCTCTCTTTTGTACACATGAAGTTCTGAAGTTCTGTCA
CTTGACCAGGATGAGGACGTGGAAAAGTTTTTTGGTGTTGGTGTTTTGTG
TTTACACAGTACAATATCACCTATTTATCGATTTCCCCTGAATTCGGAAA
ATTGGACTGCGTTCATCAAAACAACAGGGCGGTATGCGGACTTCCTTGTC
TCAAAAGCTATATAAAACATGCAAAATTACCAATAGAAACATCTCAGAAG
CTTCTTTTGGAAGAAGAAGAAGATTTTTCTCTCTTTTGTACACATGAAGT
TCTGAAGTTCTGTCACTTGACCAGGATGAGGACGTGGAAAAGTTTTTTGG
TGTTGGTGTTTTGTGTTTACACAGTACAATGTGATGAACAGCGAGACATT
ACACAACAAAATAATATTATTCAAGATGATGCTACAAAACAACTGACAAC
AGCCGATGAAAATGTTGCTGACACTGCAGAAAGTACAGCTGACGCTGTTG
TAGAAAATACTGCTGACACTGCAGAAAATACTGCTGACCCTGCAGAAAAC
ACTGCTGATGCTGCAGAAGAAAGTGCTGACACTGCAGAAAATACTGCTGA
CACTGCAGAAGAAAATGCTGACGCTGCAGAAAATGAAGAAGCAGCAGCAG
ATACATCAAAAGAAGAAAATGGCGAGCCAGAAAATGAGGAAAATGACGCT
GAAGAAGATGAACAAAAAAATGACGAAGTTATTGATAAAGTTGAACAAGA
AGATGACTTGGATGATGAAGAGGAAGACGAAACAGGTGATGAACAGCGAG
ACATTACACAACAAAATAATATTATTCAAGATGATGCTACAAAACAACTG
ACAACAGCCGATGAAAATGTTGCTGACACTGCAGAAAGTACAGCTGACGC
TGTTGTAGAAAATACTGCTGACACTGCAGAAAATACTGCTGACCCTGCAG
AAAACACTGCTGATGCTGCAGAAGAAAGTGCTGACACTGCAGAAAATACT
GCTGACACTGCAGAAGAAAATGCTGACGCTGCAGAAAATGAAGAAGCAGC
AGCAGATACATCAAAAGAAGAAAATGGCGAGCCAGAAAATGAGGAAAATG
ACGCTGAAGAAGATGAACAAAAAAATGACGAAGTTATTGATAAAGTTGAA
CAAGAAGATGACTTGGATGATGAAGAGGAAGACGAAACAGAAGCTGCAAA
TGAACAAGAAGATCCATCAACAAAAGAATCGACATCATCTTCGGACGAAC
AAGAAGAACAAAATAACGATGAAGATGAAGAAGAAGACATTGAAAAAGAT
GAATTCTCAACTTTGTTGAAAAACGATGATGTTAATGCTCAAAAAGATGC
AACAAGTACTTCAGAAGCTGCAAATGAACAAGAAGATCCATCAACAAAAG
AATCGACATCATCTTCGGACGAACAAGAAGAACAAAATAACGATGAAGAT
GAAGAAGAAGACATTGAAAAAGATGAATTCTCAACTTTGTTGAAAAACGA
TGATGTTAATGCTCAAAAAGATGCAACAAGTACTTCAGCAGAATTAGAAA
CAAAATCACAAACATCATTAGATGAAGAACAGGAACAAGACAACGATGAA
GAAAATGAAAAAGATGAAGTTATCGAAAAAAATATTGCAGCAGATAGCAC
TTCTTCAGCAGAATTAGAAACAAAATCACAAACATCATTAGATGAAGAAC
AGGAACAAGACAACGATGAAGAAAATGAAAAAGATGAAGTTATCGAAAAA
AATATTGCAGCAGATAGCACTTCTTCAGACAAAAAATCAGACGCCTCGAA
ATACAAACCACGGAGACGTAGCCATCGCAGGAGACGTTCCCACCCCAGGA
GACGTTCCCAACCAAGAAGACGTTCCCACCCAAGGAGACGTAGCCAACCC
AGGAGACGGTCCCACCCAAGAAGACGTTCCCACCCCAGGAGACGTTCCCA
CCCCAGAAGACGTACCCACCCCAGGAGACGTTCCCAGCCCAGAAGACGTT
CCCACCCCAGAAGACGTTCCCACCACAGAAGACGTTCCCAACCCAGGAGA
CGTATCCACCCAAGACGTCGTATAGGGTTCCGAAGACGATTCCACCCCAG
GAGACGTATCCATCCAAGACGTCGAATCTTCCCAAGACGTCGAATCGGAT
TCCGTCGAAGATTCCATCCACGAAGACGTCTTGGCTTTCGCAGACGTTTT
GGATTCCGTAGGAGAACAAAAAATCAGACGCCTCGAAATACAAACCACGG
AGACGTAGCCATCGCAGGAGACGTTCCCACCCCAGGAGACGTTCCCAACC
AAGAAGACGTTCCCACCCAAGGAGACGTAGCCAACCCAGGAGACGGTCCC
ACCCAAGAAGACGTTCCCACCCCAGGAGACGTTCCCACCCCAGAAGACGT
ACCCACCCCAGGAGACGTTCCCAGCCCAGAAGACGTTCCCACCCCAGAAG
ACGTTCCCACCACAGAAGACGTTCCCAACCCAGGAGACGTATCCACCCAA
GACGTCGTATAGGGTTCCGAAGACGATTCCACCCCAGGAGACGTATCCAT
CCAAGACGTCGAATCTTCCCAAGACGTCGAATCGGATTCCGTCGAAGATT
CCATCCACGAAGACGTCTTGGCTTTCGCAGACGTTTTGGATTCCGTAGGA
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1253159..1256063 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 967-1401:436 |
| Aaloc | 847-963:861 |
| Aaloc | 673-843:1399 |
| Aaloc | 268-669:2311 |
| Aaloc | 1-264:2906 |
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