|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1323027..1330804- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012421 ID=XLOC_012421|Name=XLOC_012421|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7778bp|location=Sequence derived from alignment at sc0000049_pilon:1323027..1330804- (Clytia hemisphaerica_ch_hm2_pilon)
TCCGACACATTGGAAAGGAAAGCTACAAAGTGGGCGCAACATTTGGCCAA
AATTGATCAGTTGAAGCATGAACAAAATGTGGAGGAAGGAGAAAATATCG
CCATGGCCGGAGGTAATGCCTTTCAAAATCTCGTTTTTTTTTTTGCACTT
TTTCATCATAAAGCAAATTGTAACTTGGAAGAATATTTGAGTTTTCAAAA
GTTTTTTTCTTCTTTTAGTGCTTTTGCATCAAGAAGTCAGTATTAAAATT
TTTGATAACCAAGGCTCGTAAAATGGCTATTTTACACGAGTTTTAGCGGC
CGTAGTGCAAAGATAAGAGACCTTTAGCATCTAGAACGGCGACTTGAACT
AGGACGTGAGGTAAATCTTAAAATCAAATGGCGAATCTTTTATCTAGATT
TAATCATGGAGGTATAAAGAAAGACAGGAGAAGTATGCTATTGTAACCAA
GCTCGCCCTACGATTAAAAAAGTTACGATGTATGCATGCTCATAATCTCA
TATATCGTGCATTTTTAATGAGCTCTTTTATCCATAGGTTAAATCTTATT
GGCTCATTTAAGCTTTAGAAATTAGATGAGACGAGATTCATTGTTTCTGA
CATCAGTGTAAGAAAATATTTGGACTAAAAAAAGGCCTGTAAACTTGGCA
ATCCTTCATCAAATGATAAGATTTTTCGATCAATGTTTTCTTTCAGGTGA
ACTCTATTGCTTGATACTTTCCTCCAAAATTCTCCAGCGACTTTATGTCT
ACAAATTGAGTCTGAAATCGTGTGTGCTTATAAAGAACTTTTCATTTTCT
GGCTTGAGAAAATATCTTTTCAAAATAAAATTGAACGGATAGCGAAATGG
AACATAAATTTGTTTCGTGGACGAAGTTTTATCTAATTTTCGTATATTAA
AAGGCTAGAATCTTCAATACTGATTATTAGAATGTTCAGAGCAAACTCGA
GTTCTACTAAAAAGTCTTATTTCATCGGGCGAGCTTAGAATTTCTTTTGA
TACATTTTATAAAAGAAATCAAAAGACCAATTACCGACACATTCAACTCC
TGTTTTCTTTATACCTCTATGATTTAATATGACATGGACAAATTTGAAAT
GTAGTCAAGTTTTTGTGATAAATGACGTTATAATTTTCGAGGGATTCATG
TCATTTAAAACTATTGTACTCTTCCTTTATCGTTATCGTCCAAAATACGA
GGTCAAAAAAGAATTTTCAATTTGCTTTGAGATTTGAAAACGTCGACTAA
TTACCCTATTATAAGTCACTATTCTCATGAGAGATTGATGTGAAAAGAAT
AGAATCTATAGTTGCAATCCAGATATCAATCCATAAGGGCTTTCTATTTT
GTTCAATTCTGCCTTACATTTTCAAAGTTGCCGTCCTAGATGCTAAAGGT
TCTTATAGAGCATTCGGCTACGGTGCACAATGTCGTGGCTTCTATCCCTG
GCCAAGTCATAACAAAGATTCTAAGATAGCCTCCAAAATGCCTCACTGCT
TCAATGCTCAGCAATTAAGAGAATGATCGATAGTTAGTGAAGCAATCTGA
GGAAAAAGATTGGCGTCCGCCCCCACCCTCTGGTAGATGGTAGATAGCTC
TCGAAAGGGGAGCCTTCGGCTGCGGTGGCAAACTTTAGTACTCGATCTTA
TGGTTAACAAGCATCCTTTTACGTGTCATTTACAGGGAAAGATTTGACTG
GTGAAGGCGCGACAACCATGTGGTATGACGAAATTAAAGATTACAATTTC
AATAAGCAAGGTGGATTCAACTCAAAAACAGGTCACTTCACTCAGGTTTG
AATACTACTATCGTTAAATCTTCATTATTACTGCATACAATCTTGTTATC
AAAACTCTCTCATTAAAAACTCTCCTATCATTTACAATATGCCCCGAAAA
AAAGTGTACAAATTTTTCTATGGAGTAATCATCAATTCTTTCAATCAATA
GATATTCAATTCCCAAGATGATTAAAAAGGTTTTTGAGAATGAAATATTA
AGTATAAGAGTCATAAAAGTTGGCATAGATTATGAGGATTTTACTTGATA
TAAACATCTGTCCGCTTTTTTGGAACACACTGTACATACACAGTTTTAAA
CAAAGGAAAAACAACTTTTTAAAAATTTATTTGTTTAATTATTCCGGAAA
AATCTTCTTTAGATTGTCTGGGTTGCAAGTAAACAAATCGGAGCTGGAAT
TGCAAAATCCAAATCTGGACGTACCTATGTCGTCGCTAAATATCTACCAG
CAGGTAATATCATAACTCCTCTGTTTAAGTGACGTAATGCTTAAATTCCT
TATGCTGAAATCTTTCAAGAAAATTCACATCTTTAGTCGAATAACTGAAA
TTTTGTAGCTATTTACTTACTCTCCAGGTACACGCCACACGCCACATGCC
ATATGCTAGTTAAGATATTCAGAGTGTTACTGTTGTTATTGTTGTACTCT
CTTATTCATTAAACCTGCTTAATACAGTAGCATGTATTGAAGTTGTCTGT
ACAAAGACAACTCGGTATCTACGACTAATTTCCAAATTAAATATCGTAGA
GGGTATGTTGTCATTGTCTTTTCTGGTTTGAGATTTCTCAAACCGACCGC
AGCAATGGAGTGTTGGTGAGAGAGGAGAGACGATGGCAGAAGTAAGTAAG
TAAGTAATAGTTTATTTCATGTTGACGAAAAGGTAGCAACAAAGGCTAAT
AAAAGTCAACGCTACTTTACAATTAAAAAAAACTAATGTTTTGTTGGCAG
CTCATCGTCGCTGCTACTGAGGCTAGATATTGACAGCTTTTGGTTGGCAA
AGTTTTTGTTTGTTTTTATCAAGCGAAGGTTATCTGTCTGGGACTTCCTC
TCACACGCCAAATGAAATCACCATTACATTCGGAGTTCCATTTCTTAGCT
TTTTCGCACATCTCTTTGATTTTTCTTCTTTCATTGATGGTGAAATCATC
AGTGATGCTTAGATGATTTCCAAGCCACTTCAACTTTTTTAAGGCTTTAA
GGTTGCTCATGATTCTTTCTTTTTCTTCTTCACTTTGCAAGGTCACCTTT
ATCGGACGATTTTTCCTCGGCCCATTTTCATGTTCGAACCCAATACGATG
TTGATGCGTTGGTTTGATGTCGCGGATGTCGCGGATGCCGATATCTTTGA
GCAGATCCTCAATTTCCTTTTTGTTCTTGATCTTCTTCTTTCGTTTCTTC
AACTTGTTTAGGGAGTCCATGAATTATGTTTTTTTTTCTTGATTTGATGT
CTCGTTTTCTCTCCTCTCCTCTTCTTTTTGTTCCGCGACAACAGATTTAA
GATTTTCCTTGTGTGCTTTGGCTATATCAGCGTAGGTTTTACGGGATGAC
TCTTTCATAAAATCTTTTGTCTGTTGTATCTCTTCTTTTATCATTTTCCT
TGTTTTGGCTTCTAAGTCGGTCATCTTTAGTGTTAGGATTGTTTCGATAT
GGCGCGCCAAAGCGGAAATAAATACTATCTCTCATTTCGCGACAATATCT
TTCATTTCGCGACACTATCTTTCATTTCGCGACACTATCTTTTATTTCGC
GACACTATCTTTCATTTCGCGACACTATCTTTATTAAAACGATACTATCT
TTCCAAAAAAACATTATCTTAATTGAAACAATACTATCTTTTTTACGGGA
TACTATCTTTTTTACGGAAGCCGAGAAGTGCCATCGACAAAAAAATATTT
AATTTCAGAAAAAAAGAATTAATTTTAGAATAAAAGAATATTTAATTTTA
GAAAAATAAATTTGAATTCAGAGAAAAATATTTGATTTTAGAAAATAAAT
TTAAATTTAGAAACAAAACATTTAATTTTACTTTATAAAAAATAAAACCT
TAAAACATACCTTATTGGAACTACTTCTCGCGGGTTTTAATTTTAGCGCT
TTTCGCGGTTTGTTATGTACATTAATTTTTGTTACCGAAATCTAACGCAA
CCGTTACCTACCTATTTATGATAATCAGAAAATTTTTTACCTACGTTGTT
ATTATGGGAAAAAAATGTCAGCGGAAAGTGACGAAAATTTTGAAGGGGTG
ACGAAATTTTTCCCCAACAAAATTTAGTCCCGACATTTCATCACCTGGAC
CAAAACTTTTTTTACCCGATTTTTTTATTCCCGACCAAAAACTTTTACTC
AATTTTTCCAATTTCAAATCCAAATTTTTTACACCTTTATTAACCGAAAT
TAGTGTTTTATAAACGTCGAATTACAAGATCTATTTTCGAGCTAAGTGAA
GAAAACCATATTATTTAGAGAGTTTAGTCACGGTGAAAGTGACTAACTAA
AAATAATCTTGTCTGAATAACAAAAGTCAAATCCAAAGACAAATCCAGGA
GGAAGTATGAAAACGAAAGTTGTAAGTAAGTAAGTGTGCCGCCAGGGAGG
AATCAGATCGAAAAAGTTTTCTTTTTTTTCAATTTTTTTTCAGACGGTGG
GACTTTTGGTGTAAGCATGCACGGAATCAGGCAAAAAGGTTTTCTCTTTT
TTCTCTCCAAAGAAACAAAAAACTTTTTTTCTTAAAAAAATTTTTTTCTG
AAGTGAAAATGAACTTATTTTTTCTCGAAACTAAATTGATATTTTTTCTA
AATTTAATTTTTTTTACTAAACTTAAATATTTTTTTCTAAAATTAAATAT
TTTTTTTCTAAACTTAAATATTTTTTTTCTAAAATTAAATATTTTTTTTC
TAAAATTAAATATTTTTTTCTCGATGGCACTTCTCAGCTTCCATAATAAA
GATAGTATCACGTAAAAAAAGATAGTATTGTTTCAATTAAGATAATGTTT
TTTTGGGAAAATAGTGTCGCGAACTGAAAGATAGTGTCGCCAACTGAAAG
ATAGTGTCGCCAACTGAAAGATAGTTTCGCGAACTGAAAGATAGTGCCGC
GAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAATGAAAG
ATAGTGCCGCGAAATGAAAGATAGTGTCGCGAAATGGAAGATAGTGTCGC
AAAATGAAAGATAGTATTTATTTCCGCTTTGGCGCGCCATAGTTTCGATG
TCGTTGTTGATGACTTTGCGGTTTTTGGTCAGTTCTTTTTTGAGTTTTTT
GATTTCGTTGTCTTTCTTAGCAATCTGTTCTTGCATCATATGGTACTTGT
TTTCTCCGATTTTACTTCTTAAGGATCTCGTTATTCGCACACAATTGTGA
CATACGTATTGATTATTATAAGTGTTAGCGAAGATTTACAGTTGGTAAAG
TGGCAATTGTGTGCACTCGTAATTTACCATACGTTGACAGCTACGGCATT
TGAGTCGATTTTGATCTTCATCATCATCTCGTAGCCAGAGTCACTGGCAT
AATCTTTTTGATTTTACTGATGGACTCAAAAATATCGAGATTTGTAAAAT
GAACTTTGGCTGGATACCAACAGAGTGATCAAAAAATCGCGTGCTGGGAT
GGAGATAGGCTACATCAATACACGTAACAAGGGTGCATGTTGCAGTTGTG
TTTGCTGCTTCAATCGGTGGGTCTTGGGTGTTTTTGTCGCGATTTTTATC
ATATTTAGCGAATTTCGATGATTTTTTGAGTTTCCACCATTTTTTTGAAA
GCGATGCAGAACACGTCTTAACTAAGTGACGTCAAAAAGAAGTGCTGCTA
TCTATAAATCATACTTCATGGCAGAGGTCTCCATACGGCAAATTTTTTAT
CAAACAGACAATTGCGTACAGAGTAGTATTCAAGAGGCCTCTTTGCTAAA
AATTCGGCCTTAAAATCATGGATGAGTTTATTCTTCATTCAATATTCCAG
TAAGCACTCACTTAACTAATATAGAGAACTTTTCCCTAGGGAATATGATG
GGTAACTTTCCTGCCAATGTGAAACCATTAGGAAGTGCACTTTCCAAAGA
TCAAAACGCCAATGGCTCACCAATGACAATTGCAGATCCAAAACCAACTC
AAAAGAAAAGAACTACAACAAGCACACCGAACCGGCAAACTACCACGCAA
GGTACCGTTACATTTTTACCTTATTACACAAATATAACTAAAGTCATTTT
ATTAACACGAATTGAAAAATTTCAACCCCCCCCCTCTTAATTAAAACCAG
CCGGTGTTTCCTTGAAAAAGCAGAAAAATTCGTGTTAATTTCAGATATCG
TCCAAATTTCAAGGCTGTTGAATACTTGGCTAGTAATATTCGTGTAATAA
GGTATACCGAGTTTTACCTTATAGAGAGATGAGTGCTCCGAGCCACGTTA
ATGATAAAAGTTTTATTAATCGTGGACATTTTGCCTGTGTTTTCAAATAT
CTTGATCTTAAACGTCACTTTTCGAAAACATTCGAAAATCTTTTTTTGTT
CAAATTTCTCACTTCAATGCAGCGATGCAGCAATTTTTTTTCGGACACTT
CGGTGTGTTTTTCGGACAAATATGACGGTCTCAGGCCAAAATCTTAGGGT
CAAAATTTAATGAAAATTTTAGCTTGACAAAAGAGCTGTTGTATATTTTT
GGAAAGCTCTCAAAAAATTAAGAGTAGAGATATATTGCAAGAATAGGTGA
TTTTTGTACCTAACTCGAGATATTTTACTTCAAAAAGTGCAAAAAGTGGA
GCAAATAGCTGTTTCTGGCTGAAAAACACTATTTTTAAGGCTCAATATCT
TGAATTACCCGAAAAATTCAAGGCTCTGTTATAAAAAACGAAGGATATCT
CAGATTGTTTGCTGATTCCGACAAAAATAAACAATGTCCACTTAAGGGAA
CTTATTGCGGCGAGTTTTTACAAAATTCTCCAAACTTTATCTTCGCATTA
CAAAATTGCTGCCTTGTTAAAATTAAAGATTGACGTTTACTTGCCAAAGA
AAGTTCTTTTCAAAATCAAATTGTTTTACGATTTGTGCTCCTTGCATGAA
TTAGTTCTCACCAAAAAGGTTTGCGCAGCGCAATGGGCCTTTAAAACACA
ACTGGTCGAAAAAATTTGACTTTTGCGCCTATGGGCGCAATTATCAATCA
ACGATTCCAGGCTAAAATCGAACTACCTGACTTTCTATTGTGCGCATGTG
TAAGAAAAAACCACATATAATTAATACCTCTTATGGTCAAATCTTTCTTT
CTTCATTAGTAGAAAAAAGTTTAAAGTAATTATAAACCTTTATTGCTCGC
CCGACTCGAGTCAATACATTGAATTTGCTTTTGTGGTATGGCGATTCTGC
AGCGGAAAAATATGCTGACAGTGCCAACACTGCTGTGCCTTTACGCGGAG
GGTCGGATAACGCCGCTTCTGTCTTTGTATAACCTTGACTTGATCAAAAA
AATAACAATTATCTTTCTTTCAGGACGCCCTGCCATCCCGTTGCTGGCTA
TCATGTCTTTCATCGCTGGTTTAGCATCGTTCGCTCTTTACTTAGCAGCT
CTCGTTGGTACGCACTGGGAAAAGGGCGACGCATCAAACCATTTAGGTTT
ATGGAAATGGTGCGATATCAATGAATGTATCGCAATACAAGATGTACCAC
ACGCATTACGAGCAACACAGAGTTTAAGTATCCTAGCAGCGGTTGCTGTA
TTCTTAGCTCTTGTACTAACTGTTGGGAAAATGGTTTCGCCGAAGATAAG
ATATTTAGTACCAGCTTCTGTTTTCGTCATGGGAGGTTTATTTGGGATCG
TATCAGCGGCTGTTTATACTGCAGAAGTTTCAGACTCTAGCCTGGATTAT
GGATGGTCATATGCACTAGCCTGGGTTGGAGTCAGTTTTGCAGTACTTGC
AAGTATATTGATGATAGCTTCTCGATAA Coding sequence (CDS) from alignment at sc0000049_pilon:1323027..1330804- >XLOC_012421 ID=XLOC_012421|Name=XLOC_012421|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1860bp|location=Sequence derived from alignment at sc0000049_pilon:1323027..1330804- (Clytia hemisphaerica_ch_hm2_pilon)
TCCGACACATTGGAAAGGAAAGCTACAAAGTGGGCGCAACATTTGGCCAA
AATTGATCAGTTGAAGCATGAACAAAATGTGGAGGAAGGAGAAAATATCG
CCATGGCCGGAGTCCGACACATTGGAAAGGAAAGCTACAAAGTGGGCGCA
ACATTTGGCCAAAATTGATCAGTTGAAGCATGAACAAAATGTGGAGGAAG
GAGAAAATATCGCCATGGCCGGAGGGAAAGATTTGACTGGTGAAGGCGCG
ACAACCATGTGGTATGACGAAATTAAAGATTACAATTTCAATAAGCAAGG
TGGATTCAACTCAAAAACAGGTCACTTCACTCAGGGAAAGATTTGACTGG
TGAAGGCGCGACAACCATGTGGTATGACGAAATTAAAGATTACAATTTCA
ATAAGCAAGGTGGATTCAACTCAAAAACAGGTCACTTCACTCAGATTGTC
TGGGTTGCAAGTAAACAAATCGGAGCTGGAATTGCAAAATCCAAATCTGG
ACGTACCTATGTCGTCGCTAAATATCTACCAGCAGATTGTCTGGGTTGCA
AGTAAACAAATCGGAGCTGGAATTGCAAAATCCAAATCTGGACGTACCTA
TGTCGTCGCTAAATATCTACCAGCAGGGAATATGATGGGTAACTTTCCTG
CCAATGTGAAACCATTAGGAAGTGCACTTTCCAAAGATCAAAACGCCAAT
GGCTCACCAATGACAATTGCAGATCCAAAACCAACTCAAAAGAAAAGAAC
TACAACAAGCACACCGAACCGGCAAACTACCACGCAAGGGAATATGATGG
GTAACTTTCCTGCCAATGTGAAACCATTAGGAAGTGCACTTTCCAAAGAT
CAAAACGCCAATGGCTCACCAATGACAATTGCAGATCCAAAACCAACTCA
AAAGAAAAGAACTACAACAAGCACACCGAACCGGCAAACTACCACGCAAG
GACGCCCTGCCATCCCGTTGCTGGCTATCATGTCTTTCATCGCTGGTTTA
GCATCGTTCGCTCTTTACTTAGCAGCTCTCGTTGGTACGCACTGGGAAAA
GGGCGACGCATCAAACCATTTAGGTTTATGGAAATGGTGCGATATCAATG
AATGTATCGCAATACAAGATGTACCACACGCATTACGAGCAACACAGAGT
TTAAGTATCCTAGCAGCGGTTGCTGTATTCTTAGCTCTTGTACTAACTGT
TGGGAAAATGGTTTCGCCGAAGATAAGATATTTAGTACCAGCTTCTGTTT
TCGTCATGGGAGGTTTATTTGGGATCGTATCAGCGGCTGTTTATACTGCA
GAAGTTTCAGACTCTAGCCTGGATTATGGATGGTCATATGCACTAGCCTG
GGTTGGAGTCAGTTTTGCAGTACTTGCAAGTATATTGATGATAGCTTCTC
GATAAGACGCCCTGCCATCCCGTTGCTGGCTATCATGTCTTTCATCGCTG
GTTTAGCATCGTTCGCTCTTTACTTAGCAGCTCTCGTTGGTACGCACTGG
GAAAAGGGCGACGCATCAAACCATTTAGGTTTATGGAAATGGTGCGATAT
CAATGAATGTATCGCAATACAAGATGTACCACACGCATTACGAGCAACAC
AGAGTTTAAGTATCCTAGCAGCGGTTGCTGTATTCTTAGCTCTTGTACTA
ACTGTTGGGAAAATGGTTTCGCCGAAGATAAGATATTTAGTACCAGCTTC
TGTTTTCGTCATGGGAGGTTTATTTGGGATCGTATCAGCGGCTGTTTATA
CTGCAGAAGTTTCAGACTCTAGCCTGGATTATGGATGGTCATATGCACTA
GCCTGGGTTGGAGTCAGTTTTGCAGTACTTGCAAGTATATTGATGATAGC
TTCTCGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1323027..1330804 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 553-1005:454 |
| Aaloc | 391-549:1938 |
| Aaloc | 298-387:5617 |
| Aaloc | 190-297:6092 |
| Aaloc | 76-186:7779 |
|
