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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1337598..1340020- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012420 ID=XLOC_012420|Name=XLOC_012420|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2423bp|location=Sequence derived from alignment at sc0000049_pilon:1337598..1340020- (Clytia hemisphaerica_ch_hm2_pilon)
GATGCAAGTCATGGAAAAATCAAAGTTGAAAACCCTATCGTTGAGCTTGA
TGGTGACGAAATGACAAGAATCATTTGGCACAAAATTAAAGGAGAGGTAA
CAACTTTTAAGGATCTTGGGCCCAGCCTGCATGTCCATTGCAGGCTGCAT
CATTTTAGGCGTGCGATATCACGCGCACACCTCCACACACACCTAAAATG
TCTGAGGAGTGCGATCAATCACACCCCATAAAGTAAGTTTCACAACTGAA
AGTTGTGCATAGCACGCCTTATCACACGCCTAAATTACTAAAATTAAGGT
TTTAGGTTTAGGAGTGTGATTGACCACATGCCTGAAATTTTCAAATGATG
CAGCCTGCATTGTGTAAACGTTTTTTATTGTTTTTATTTTATCTCGATGT
TTCTAAAGCAATTCACATTCTAATATCAGAAGGCAGTGCATTTTGCACTT
TGTTGATTCAACTGTTGCACACAGCTTAAAATGTAGTTAGTCCAAGCTGT
AAATAACAGAAACATCTAAATAAAAAAATCTTTAACAGCCAGGCTTATAA
GGACTTAAGCTTTCAATGCAAAAAAAATCTATTATGTAATATTCATACAA
ATTATACAATAGTAATTGGCTTAGAGATCAATACAGGAAAATATTGGCCG
CTGTCGAGGTATAGACCAAGCTTGCGAGCTTGTATTGGACCGTTTACGTC
AGTTGTTGTGTTTTAAAAAAGTGTATAATAAGATAATTCAAAGCTCTTTA
AAAATCTTTTTTTCAATATCAACTCAACATCTAAAGATTGGGGTGACTTT
TGAATGTTATGATTATCAATTGGCCTCAAAAAAAAAATTTGAAGTATTTT
AACAACAAAAACAAGCAAAGCACGTGAGGAATAAGAGGAAACCATTGTGG
AATCCAAGTGACTTGAATTAAATGATCTCTTATTTCATGGTTAACTTTTC
TTGACAACAATCCATTTACACTTGTAGCTCATTTTGCCATACTTGGATAT
TGACTGTAAATATTATGATCTTGGTCTGCCCTACCGTGATGAAACCAATG
ATCAAGTTACTGTTGATGCAGCGGAAGCCATCTTGAAATACAATGTTGGT
GTGAAGTGTGCCACCATCACTCCTGATGAAGAACGGGTCACTGGTATGTA
TCGGATTGAAGTTTGAAATCTTTATCTTTTGCTTCTTTATACTAATGGTT
TAATTTTCCTCTTCAAACTAATTTTTAATCCTTTGAATTATTTATTTTTA
AAGCTAAGACAGACATACAGGCAGGCAGGGAGGCAGGCATACTGATAGAC
AAGAAGCATTTTTTCATCTTTTGTAAATTTCTGTGAAGAACTATTGCAAA
AATTATGTTTTTGAGATTTCAATTGTTTTTTTTTAATCTCTTTTTCTTTC
CAACTTTTCAACAGAGTTCAATTTGAAAGAGATGTGGAGGAGCCCCAATG
GAACCATCCGAAACATCTTAGGTGGAACTGTTTTCCGTGAACCCATCATG
TGTACAAATGTACCTCGACTTGTTCCTGGTTGGGTTGAACCTATTGTTAT
TGGACGTCATGCCCACGGTGATCAGGTTGGAAAGATTTCTATTATTACTG
TATAATGGGAAAAATCTTAATAAAAAATTTTATGCACGATGCTATATTGG
AATTTCCGTTGGAAACAGTGTGCACAGTTCTTCCTTCTCAGCAAGGTGGA
AAAAGAGGTTTTTCTGTCTCATATTTCAACAAAATTTGAAGAATCTTCCC
AGATTGGTTTTCTCCAAAACTCTTCTAAAAACGTTTCTTTGAAGAAATCA
ATCAACTTTTTCTACTGTTTTCTAGTATAAAGCACAAGACGTGGTTGTGA
AGGGAGCTGGCAAATTTGAAATTCAATTCACACCAAAGGATGGCAGTGAA
AAAACCACTGTGGACGTCTTTGATTTCGATGGCAAGAAATTTCATCTAGA
TTTGTTTTACTAACGAAAAATCAACCTTTAGGAACTAATTCGTTTTCAGA
AGAAGCATTTTTCTAGACTATTTCACCAGATTGTTTATTTTCATTAAAAT
GTGTCCCCTCTAAAATCAGTTTTTTTAACAGATCTCCTTTCAAGGTGTAG
TCTCTTTTATTTCCCCTTATTTGAAGCATCGTTCCCTTTCTTTAAATTCG
GAAGTACTCCAATTTGCTTAAAACTATTTATTTTTCGCTACTGATTTTTC
TGAACTGTTATATAAGCAAATACTTTCTATATCCTATCCAGGAAGTGGTG
GTTGTATTATGGGTATGTACAATACAGACGAATCCATCCGTGATTTCGCA
CACAGCTGTTTCCAATACGCCCTTATGAAGAAATGGCCACTCTACATGAG
CACTAAAAACACCATCTTGAAAAGATACGACGGTAGATTTAAAGATATCT
TTCAAGACATCTTTGAAGAGTAA Coding sequence (CDS) from alignment at sc0000049_pilon:1337598..1340020- >XLOC_012420 ID=XLOC_012420|Name=XLOC_012420|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1422bp|location=Sequence derived from alignment at sc0000049_pilon:1337598..1340020- (Clytia hemisphaerica_ch_hm2_pilon)
GATGCAAGTCATGGAAAAATCAAAGTTGAAAACCCTATCGTTGAGCTTGA
TGGTGACGAAATGACAAGAATCATTTGGCACAAAATTAAAGGAGAGGATG
CAAGTCATGGAAAAATCAAAGTTGAAAACCCTATCGTTGAGCTTGATGGT
GACGAAATGACAAGAATCATTTGGCACAAAATTAAAGGAGAGCTCATTTT
GCCATACTTGGATATTGACTGTAAATATTATGATCTTGGTCTGCCCTACC
GTGATGAAACCAATGATCAAGTTACTGTTGATGCAGCGGAAGCCATCTTG
AAATACAATGTTGGTGTGAAGTGTGCCACCATCACTCCTGATGAAGAACG
GGTCACTGCTCATTTTGCCATACTTGGATATTGACTGTAAATATTATGAT
CTTGGTCTGCCCTACCGTGATGAAACCAATGATCAAGTTACTGTTGATGC
AGCGGAAGCCATCTTGAAATACAATGTTGGTGTGAAGTGTGCCACCATCA
CTCCTGATGAAGAACGGGTCACTGAGTTCAATTTGAAAGAGATGTGGAGG
AGCCCCAATGGAACCATCCGAAACATCTTAGGTGGAACTGTTTTCCGTGA
ACCCATCATGTGTACAAATGTACCTCGACTTGTTCCTGGTTGGGTTGAAC
CTATTGTTATTGGACGTCATGCCCACGGTGATCAGAGTTCAATTTGAAAG
AGATGTGGAGGAGCCCCAATGGAACCATCCGAAACATCTTAGGTGGAACT
GTTTTCCGTGAACCCATCATGTGTACAAATGTACCTCGACTTGTTCCTGG
TTGGGTTGAACCTATTGTTATTGGACGTCATGCCCACGGTGATCAGTATA
AAGCACAAGACGTGGTTGTGAAGGGAGCTGGCAAATTTGAAATTCAATTC
ACACCAAAGGATGGCAGTGAAAAAACCACTGTGGACGTCTTTGATTTCGA
TGTATAAAGCACAAGACGTGGTTGTGAAGGGAGCTGGCAAATTTGAAATT
CAATTCACACCAAAGGATGGCAGTGAAAAAACCACTGTGGACGTCTTTGA
TTTCGATGGAAGTGGTGGTTGTATTATGGGTATGTACAATACAGACGAAT
CCATCCGTGATTTCGCACACAGCTGTTTCCAATACGCCCTTATGAAGAAA
TGGCCACTCTACATGAGCACTAAAAACACCATCTTGAAAAGATACGACGG
TAGATTTAAAGATATCTTTCAAGACATCTTTGAAGAGTAAGAAGTGGTGG
TTGTATTATGGGTATGTACAATACAGACGAATCCATCCGTGATTTCGCAC
ACAGCTGTTTCCAATACGCCCTTATGAAGAAATGGCCACTCTACATGAGC
ACTAAAAACACCATCTTGAAAAGATACGACGGTAGATTTAAAGATATCTT
TCAAGACATCTTTGAAGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1337598..1340020 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 577-756:181 |
| Aaloc | 469-573:599 |
| Aaloc | 310-468:1008 |
| Aaloc | 142-306:1447 |
| Aaloc | 46-141:2424 |
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