XLOC_012298.3 (mRNA) -

Overview
NameXLOC_012298.3
Unique NameXLOC_012298.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000566_pilon:68973..70239-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012298.3 ID=XLOC_012298.3|Name=XLOC_012298.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1267bp|location=Sequence derived from alignment at sc0000566_pilon:68973..70239- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCAGTTACTTGATTGTGTGAGTATTATGTGTCAAGGTTATCTGAA GATTTATATTCAAGTTAAAAACTAAAGCCTTTTCCAAAGGTTTTCTTCTT CCCAAGAAGATTTTTGCATTTTCCAGTAAACCCATTTCTGTTTCTCTTTC TGTTTCAAAGATAACTAGCGGAAAGTTTGGCTTAGGTCCGAAGAGATTCC AAGATTGGCTCGATGCCTATGACAAAGACACCCTTGAAAAATCTCTTTTG GCTTCTGCATCGAAACCTAAAGGTATACAAAGATACTCTTTTGCTATTAT GGCTTTTTGGTATATTCCAAAGGCTGATTTTCCAGTCGAACTATTAGCTT TAAAGCTATACAGATTTGTACACATTTTTCGACTTTAAAGAACAGATACA TTAACATTACATTAACATTGCTTCCTTAAAGGTTTTTTATGTATTCAACA CACTTTATATTGTAAAATCTTTGAAACTGAATTTCATTTAAAAGTCGAAC TAAGCGGCTAGATATCCTACTGAAAGTAATTTTATTCTTGTATTATATAT TATATAATATAGACCCAAAACTACGACTGACCATGACATTGGGACATCAC GACATAATATAAAACTACGATAAGACAGAACAACTGACAAACTCACAAAC TCAGGACATCAGACAGGTCTTCCTCAACGTACTTTCTGTGCCGATTGATT ATTTTTAAACTCGACTATACTTTTCTTAAATTTCGAAAATGGACTTGAAG TTTCAAAATTGAATTCAAAATTACGTCTTTTCCGTCTTTTACTCACTTTT ATTTGAAAGCTTTGAGAAATTTATTCAATATTGAATATTTCAAAGTTAAA AAGTCAAAACATGATGATGGTGTTGCTTTCTAAAAGTTTTGATTTCTTTT AGTAATGGTGAATTTGTTGGGTATTGCTTTGGGCCTCAACAAAAATTTAA AGATTGTAGATGAAGAAGGCGTGAGTGTTGTTTGCGTCGATGATACCTCG TTATGTACGATGCCATTCATACTCACTTCTGGCGGATGTTTATATTTGGC TGCCTTTGAGGACTATGATCCAGAGAGTTGTCGCAGCCACAACATGTACT GTTATGGTAGAGAGGATGAGGAACAGGTAGTCTGCCGCAATTGTCACCTT GCCTATCACTTACCCTGTATTCGATGGCAAGATACATGTGGCTGCGATAA AATCGAGAACATAAAATTACGGTACTTTTTTACTCATCATTCATATTATT GTTGGTCAAGACGTTAA

Coding sequence (CDS) from alignment at sc0000566_pilon:68973..70239-

>XLOC_012298.3 ID=XLOC_012298.3|Name=XLOC_012298.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=996bp|location=Sequence derived from alignment at sc0000566_pilon:68973..70239- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCAGTTACTTGATTGTATGCAGCAGTTACTTGATTGTATAACTAG
CGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGCTCGATGCCT
ATGACAAAGACACCCTTGAAAAATCTCTTTTGGCTTCTGCATCGAAACCT
AAAGATAACTAGCGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATT
GGCTCGATGCCTATGACAAAGACACCCTTGAAAAATCTCTTTTGGCTTCT
GCATCGAAACCTAAAGTAATGGTGAATTTGTTGGGTATTGCTTTGGGCCT
CAACAAAAATTTAAAGATTGTAGATGAAGAAGGCGTGAGTGTTGTTTGCG
TCGATGATACCTCGTTATGTACGATGCCATTCATACTCACTTCTGGCGGA
TGTTTATATTTGGCTGCCTTTGAGGACTATGATCCAGAGAGTTGTCGCAG
CCACAACATGTACTGTTATGGTAGAGAGGATGAGGAACAGGTAGTCTGCC
GCAATTGTCACCTTGCCTATCACTTACCCTGTATTCGATGGCAAGATACA
TGTGGCTGCGATAAAATCGAGAACATAAAATTACGGTACTTTTTTACTCA
TCATTCATATTATTGTTGGTCAAGACGTTAATAATGGTGAATTTGTTGGG
TATTGCTTTGGGCCTCAACAAAAATTTAAAGATTGTAGATGAAGAAGGCG
TGAGTGTTGTTTGCGTCGATGATACCTCGTTATGTACGATGCCATTCATA
CTCACTTCTGGCGGATGTTTATATTTGGCTGCCTTTGAGGACTATGATCC
AGAGAGTTGTCGCAGCCACAACATGTACTGTTATGGTAGAGAGGATGAGG
AACAGGTAGTCTGCCGCAATTGTCACCTTGCCTATCACTTACCCTGTATT
CGATGGCAAGATACATGTGGCTGCGATAAAATCGAGAACATAAAATTACG
GTACTTTTTTACTCATCATTCATATTATTGTTGGTCAAGACGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_012298.3XLOC_012298.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000566_pilongenomesc0000566_pilon:68973..70239 -
Properties
Property NameValue
Aaloc136-498:364
Aaloc22-132:1108
Aaloc1-21:1268