XLOC_012298.2 (mRNA) -

Overview
NameXLOC_012298.2
Unique NameXLOC_012298.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000419_pilon:128279..129539-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012298.2 ID=XLOC_012298.2|Name=XLOC_012298.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1261bp|location=Sequence derived from alignment at sc0000419_pilon:128279..129539- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCAGTTACTTGATTGTGTGAGTATTATGTGTGAAGGTTATCTGAA GATTTAAATTCAAGTAAAAAACTAAAGACTTTTCCAGATTTTTGCATTTT CCAGTAAACCTATTTCTGTTTCTCTTTCTGTTTCAAAGATTACTAGCGGA AAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGCTCGATGCCTATGA CAAAGACACCCTTGAAAAATCTCTTTTGGCTTCTGTATCGAAACCTAAAG GTATACAAAGATACTCTTTTGCTATTATGGCTTTTCGGTATATTCCAAAG GCTGATTTTCCAGTCAAACTATTAGCTTTAAAGCTATACAGATTTGTGCA CATTTTCGACTTTAAAGAACAGATACATTAACATTACATTAACATTACAT TAACATTGCTTCCTTAAAGGTTTTTTATGTATTCAACACACTTTATATTG TAAAATCTTTGAAACTGAATTTAATTTAAAAGTCGAACTAAGCGGCTAGA TATCCTACTGAAAATAAATTTTATTCTTGTATTATATTATATTGTATTAT ATAGACCCAAAACTACGACTGACCATGACATTGGGACATCACGACATAAT ATAAAACTACGATAAGACAGAACGACTGACAAACTCACAAACTCAGGACA GGTCTTCCTCAACGTACTTTCTGTGCCGATTGATTATTTTTAAACTCGAC TATACTTTTCTTAAATTTGGAAAGTGGACTTGAAGTTTCAAAATTGAATT CAAAATTACGTCTTTTCCGTCTTTTACTTACTTTTATTTTAAAGCTTTGA GATCTTTGAAATTTATTCAATACTGAATATTGCAAAGTTAAAAAGTCAAA ACATGATGATGTGGTGTTGCTTTCTAAAACATTTGATTTCTTTTAGTAAT GGTGAATTTGTTGGGTATTGCTTTGGGCCTCAACAAAAATTTAAAGATTG TAGATGAAGAAGGCGTGAGTGTTGTTTGCGTCGATGATACCTCGTTATGT ACGATGCCATTCATACTCACTTCTGGCGGATGTTTATATTTGGCTGCCTT TGAGGACTATGATCCAGAGAGTTGTCGCAGCCACAACATGTACTGTTATG GTAGAGAGGATGAGGAACAGGCAGTCTGCCGCAATTGTCACCTTGCCTAT CACTTACCCTGTATTCGATGGCAAGATACATGTGGCTGCGATAAAATCGA GAACATAAAATTACGGTACTTTTTTACTCATCATTCATATTATTGTTGGT CAAGACGTTAA

Coding sequence (CDS) from alignment at sc0000419_pilon:128279..129539-

>XLOC_012298.2 ID=XLOC_012298.2|Name=XLOC_012298.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=996bp|location=Sequence derived from alignment at sc0000419_pilon:128279..129539- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCAGTTACTTGATTGTATGCAGCAGTTACTTGATTGTATTACTAG
CGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATTGGCTCGATGCCT
ATGACAAAGACACCCTTGAAAAATCTCTTTTGGCTTCTGTATCGAAACCT
AAAGATTACTAGCGGAAAGTTTGGCTTAGGTCCGAAGAGATTCCAAGATT
GGCTCGATGCCTATGACAAAGACACCCTTGAAAAATCTCTTTTGGCTTCT
GTATCGAAACCTAAAGTAATGGTGAATTTGTTGGGTATTGCTTTGGGCCT
CAACAAAAATTTAAAGATTGTAGATGAAGAAGGCGTGAGTGTTGTTTGCG
TCGATGATACCTCGTTATGTACGATGCCATTCATACTCACTTCTGGCGGA
TGTTTATATTTGGCTGCCTTTGAGGACTATGATCCAGAGAGTTGTCGCAG
CCACAACATGTACTGTTATGGTAGAGAGGATGAGGAACAGGCAGTCTGCC
GCAATTGTCACCTTGCCTATCACTTACCCTGTATTCGATGGCAAGATACA
TGTGGCTGCGATAAAATCGAGAACATAAAATTACGGTACTTTTTTACTCA
TCATTCATATTATTGTTGGTCAAGACGTTAATAATGGTGAATTTGTTGGG
TATTGCTTTGGGCCTCAACAAAAATTTAAAGATTGTAGATGAAGAAGGCG
TGAGTGTTGTTTGCGTCGATGATACCTCGTTATGTACGATGCCATTCATA
CTCACTTCTGGCGGATGTTTATATTTGGCTGCCTTTGAGGACTATGATCC
AGAGAGTTGTCGCAGCCACAACATGTACTGTTATGGTAGAGAGGATGAGG
AACAGGCAGTCTGCCGCAATTGTCACCTTGCCTATCACTTACCCTGTATT
CGATGGCAAGATACATGTGGCTGCGATAAAATCGAGAACATAAAATTACG
GTACTTTTTTACTCATCATTCATATTATTGTTGGTCAAGACGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_012298.2XLOC_012298.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000419_pilongenomesc0000419_pilon:128279..129539 -
Properties
Property NameValue
Aaloc136-498:364
Aaloc22-132:1124
Aaloc1-21:1262