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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:201466..203257+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012254 ID=XLOC_012254|Name=XLOC_012254|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1792bp|location=Sequence derived from alignment at sc0000098_pilon:201466..203257+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGAAAGAGCATAACAAGAGTCGATCACGTAAGAATAATAACGA
AGTTGTATCAACCGAACGTTTGTACACGTTTTACGTTCTCATCCCGTTCG
TTAACGTCACTCACACTTTACGGAAACTCTCAAAGCGTGCCACCGTACGC
GAACTTAAAGAAGTTATCGAAATCACGTGTGGTATTCCTACATCACTTCA
ACGTATCTATTTCCTCGACCAATCAGATCTGACGGATGATTGCGTTTTGA
CGTCGTTGGATATCGTTAATAAGGCTACGTTTACATTAGCTGTTTGGAAT
AAATGGGAAAACATTATACGTAGTGTTTACAAAAACGATTTCAAAGGTGT
TACGGATTACGTGCTTTGTTCTGATAGGGGTCATAAAGTGTCTCCCGTGG
CAACCCGACAGCGACGTGGCGAAGTAGCGCTCTTAACGGCGGTTAAGTTG
GGAAACGTTGACGTTATACGTAGACTACTGGAAGAAGGAATCAACGTAAA
CGCAAGAACAGAATTAGGTTATACCCCTCTTCATATTGCCGTTGCAAATG
GAAAATATCGCTGCATTGATTTCCTACTTGAAAAAGGAGCTATAGACGAT
TCCAAAACGAACCCGAACGGACAAGAAGCGGTCCGCTTATCAAAAGAAAA
CGGGTACCCTGATAGTGAGCGACATCTCTGTATGTTTGAATGGCAACTCA
GAGCTAAAACAGCTCCTTCGCGACCCACAAAATTGGTTCCTCTGCTTCAA
CATCAACAGTTTGACTCAAAGAATCCAACTTGGTTCGATGGGCCCTTAGC
AACGAAATTTGTTTGTAGTACATTACCACAGAAAGAGTTCTCCGGTACAC
GTATCAATGCACCCCCGGTTGTACCGGTCGTCCCACCTTACCAAGACGAT
AAAGGTAAATCTGAATCTCCTTCAAATAGTATGtggttacactttttttt
ttagaagaacatccaaaatttttgaagccttcgaatattcttaacttatt
gaccattttcctaagaaatagggtgtttttgagtctacaaagccttaaaa
tgttaataacttgttcttaacattttggacagcgaagccttgtgttctta
tatagtttgtttttataaaaaaacgtgtttgcTAGTTACAAAGGCCCTAT
AAAGTTAAAGTGGTACTTTCGTTAATATTCCTTTGTTGCAAGGATCTCAC
TTATATCCAGCATTCCAGAGGATTGGAAAATAATTTCAGCTTTTTGTATT
ATAtgtatttatcaatttttagaatatttcgAAAAAACAGATTCAGGCGC
AGAGAGGTAAGTGATATTCTAAACCtttttttCACCGATGAAAAGCTCAG
TTTGTTATCACTATTTATGCAAATAATAGTTGACAGGGATAAAAGTTTGT
AGTGAACATTGGAAGAATATCACACCCTTTGCAAGACCTTGGGTGATATT
GGTCAAACAAATCTTTGAGAATCCTTTCTTTTCCCTCGTAGAATGCACAC
ATACATTTCCCATGAAAACTGGCTTCGTCGAAAACAAGAAGAAGCCGAGA
TGCTACGACAAAAACAAGAACAACTGGCGGCCATGCGACTAATCGAAAAA
GAACGCGAGGAGACCGAGAAGAAACGTTTAATGGTCTTAAGGAAAAGAGA
ACACGAGAAAAGAACATTGGCTATAAAAGATTCGGCGAATGAAAAATACA
GGAAGAAACAAGGTATTTATGAAGATTATACTTATGTACCGGGTTATTCG
AAGTCGATTTTACAGCAATACATGAGTGATATGATGACGTAA Coding sequence (CDS) from alignment at sc0000098_pilon:201466..203257+ >XLOC_012254 ID=XLOC_012254|Name=XLOC_012254|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2478bp|location=Sequence derived from alignment at sc0000098_pilon:201466..203257+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGAAAGAGCATAACAAGAGTCGATCACGTAAGAATAATAACGA
AGTTGTATCAACCGAACGTTTGTACACGTTTTACGTTCTCATCCCGTTCG
TTAACGTCACTCACACTTTACGGAAACTCTCAAAGCGTGCCACCGTACGC
GAACTTAAAGAAGTTATCGAAATCACGTGTGGTATTCCTACATCACTTCA
ACGTATCTATTTCCTCGACCAATCAGATCTGACGGATGATTGCGTTTTGA
CGTCGTTGGATATCGTTAATAAGGCTACGTTTACATTAGCTGTTTGGAAT
AAATGGGAAAACATTATACGTAGTGTTTACAAAAACGATTTCAAAGGTGT
TACGGATTACGTGCTTTGTTCTGATAGGGGTCATAAAGTGTCTCCCGTGG
CAACCCGACAGCGACGTGGCGAAGTAGCGCTCTTAACGGCGGTTAAGTTG
GGAAACGTTGACGTTATACGTAGACTACTGGAAGAAGGAATCAACGTAAA
CGCAAGAACAGAATTAGGTTATACCCCTCTTCATATTGCCGTTGCAAATG
GAAAATATCGCTGCATTGATTTCCTACTTGAAAAAGGAGCTATAGACGAT
TCCAAAACGAACCCGAACGGACAAGAAGCGGTCCGCTTATCAAAAGAAAA
CGGGTACCCTGATAGTGAGCGACATCTCTGTATGTTTGAATGGCAACTCA
GAGCTAAAACAGCTCCTTCGCGACCCACAAAATTGGTTCCTCTGCTTCAA
CATCAACAGTTTGACTCAAAGAATCCAACTTGGTTCGATGGGCCCTTAGC
AACGAAATTTGTTTGTAGTACATTACCACAGAAAGAGTTCTCCGGTACAC
GTATCAATGCACCCCCGGTTGTACCGGTCGTCCCACCTTACCAAGACGAT
AAAGATGAAAAAGAAAGAGCATAACAAGAGTCGATCACGTAAGAATAATA
ACGAAGTTGTATCAACCGAACGTTTGTACACGTTTTACGTTCTCATCCCG
TTCGTTAACGTCACTCACACTTTACGGAAACTCTCAAAGCGTGCCACCGT
ACGCGAACTTAAAGAAGTTATCGAAATCACGTGTGGTATTCCTACATCAC
TTCAACGTATCTATTTCCTCGACCAATCAGATCTGACGGATGATTGCGTT
TTGACGTCGTTGGATATCGTTAATAAGGCTACGTTTACATTAGCTGTTTG
GAATAAATGGGAAAACATTATACGTAGTGTTTACAAAAACGATTTCAAAG
GTGTTACGGATTACGTGCTTTGTTCTGATAGGGGTCATAAAGTGTCTCCC
GTGGCAACCCGACAGCGACGTGGCGAAGTAGCGCTCTTAACGGCGGTTAA
GTTGGGAAACGTTGACGTTATACGTAGACTACTGGAAGAAGGAATCAACG
TAAACGCAAGAACAGAATTAGGTTATACCCCTCTTCATATTGCCGTTGCA
AATGGAAAATATCGCTGCATTGATTTCCTACTTGAAAAAGGAGCTATAGA
CGATTCCAAAACGAACCCGAACGGACAAGAAGCGGTCCGCTTATCAAAAG
AAAACGGGTACCCTGATAGTGAGCGACATCTCTGTATGTTTGAATGGCAA
CTCAGAGCTAAAACAGCTCCTTCGCGACCCACAAAATTGGTTCCTCTGCT
TCAACATCAACAGTTTGACTCAAAGAATCCAACTTGGTTCGATGGGCCCT
TAGCAACGAAATTTGTTTGTAGTACATTACCACAGAAAGAGTTCTCCGGT
ACACGTATCAATGCACCCCCGGTTGTACCGGTCGTCCCACCTTACCAAGA
CGATAAAGaatatttcgAAAAAACAGATTCAGGCGCAGAGAGaatatttc
gAAAAAACAGATTCAGGCGCAGAGAGAATGCACACATACATTTCCCATGA
AAACTGGCTTCGTCGAAAACAAGAAGAAGCCGAGATGCTACGACAAAAAC
AAGAACAACTGGCGGCCATGCGACTAATCGAAAAAGAACGCGAGGAGACC
GAGAAGAAACGTTTAATGGTCTTAAGGAAAAGAGAACACGAGAAAAGAAC
ATTGGCTATAAAAGATTCGGCGAATGAAAAATACAGGAAGAAACAAGGTA
TTTATGAAGATTATACTTATGTACCGGGTTATTCGAAGTCGATTTTACAG
CAATACATGAGTGATATGATGACGTAAAATGCACACATACATTTCCCATG
AAAACTGGCTTCGTCGAAAACAAGAAGAAGCCGAGATGCTACGACAAAAA
CAAGAACAACTGGCGGCCATGCGACTAATCGAAAAAGAACGCGAGGAGAC
CGAGAAGAAACGTTTAATGGTCTTAAGGAAAAGAGAACACGAGAAAAGAA
CATTGGCTATAAAAGATTCGGCGAATGAAAAATACAGGAAGAAACAAGGT
ATTTATGAAGATTATACTTATGTACCGGGTTATTCGAAGTCGATTTTACA
GCAATACATGAGTGATATGATGACGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:201466..203257 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 940-1239:1493 |
| Aaloc | 907-936:1275 |
| Aaloc | 1-903:1 |
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