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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:273554..276831+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012252 ID=XLOC_012252|Name=XLOC_012252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3278bp|location=Sequence derived from alignment at sc0000098_pilon:273554..276831+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTTTGGTAGCGATTGGGCTCTGCATTTTTGGATTTATGTAAGATTC
TTAACAAAAGGCTTGAATTGAGAAAGCATACACCTATTTTAGTTTTCCGA
AATCTTCCAATTTAGCGGaaaaaaaTCTTAAGCGatgtaccttattacac
gaatattactaggcaagtattcaacggccttgaaattaacacacaATTTc
tattgctttttcaaggacaccatggctggttttaattaagggagttttta
ttaacacgaaatttttcaataaaatgactagttattcgtgtaataaggta
aattttaaatcttatttGATTCTCACAGAATTGATCCATTTCCCTTTGTG
GTTTTAGATTTAAAAGGAACATTCTCAAGGGGTCTAGAGTTTACTTAAAA
CCTATCTTCCACGCACAAAATttctgaggatttaaaaatgCAGGGCGACT
AAAAAGCATCCCTGTTCCACTGATCCTCTGTAAAATGTTTCTTCATTGAG
TATTAAAACAAAACACATGAATTTCAATGGAAatagaaatatttaataaa
tcaaatatttaatttttatcgCTTGGAATGAatgtactcttgtctcccga
atagacgggggggggtccgaataagcaggggggtaggaaaattttctaaa
ttctaataagcggggtggatggaataagaggggggggggtggtttgaaga
cataatttttttaactgatatcaatttcaacaacaaaagtgaaactttca
caaatgaacacgtaaaattagaaccaatactaacaaaaaggaaaatttta
acaagtttaaggtctatctacactgtaataaataatttaattattaaaat
ttaattagcaggggggtcttaataagagcgggggggatggattttttttg
ctcttaacaattagcggggggggacgtctattcgggagacaagagtattc
TTTCCATTGAGATAAAATTACAGGTTATTTCTTCGACCAGGTGATGTTTT
TTGGTCTGCAATGTAACCCCCATGGGGACCCCCACGGTTTCAATAAAGTC
ACACATGCTTGCACGGTATTGTTCAAGAGACATTGACAATAGAGTTTAAA
CGATTTCAAGCAGATTAATCTTCGATAGATTTAATTTCGTGTTTTCGGGA
AATGGTGTTTGTCTTTTTCGTAAAAAAGAATCCCTGGAAATTATATCATA
ATTTTTgggattgtttttcttttgcagaaaaaacaTCCGTATCTTCCTTT
TTGTTAAAACCACCAAGGCCCAAATTGAGATAACGCAAGAAATGGAGCGC
TGACTTGCAAACTATATCTAGAACATTTCTTTGCTCCTGAAATACCAGTA
ATttaacagtagcgtagacagcaGGGGCGCAAATTTCTtgtaggagagca
gacttttatGACACTGTGATTATCTATTAATACCATGAATAGATAAATTa
tagtgtcataaaaatctgctttgcGCCCCtgttgtctacgctactgtaaa
TTTATAGTATACTATAAATGAATCAATATTCCTTCATATTTATAGAAAGT
ACAATGAATGCCAGCATTTGCAACATGGATGTTCTCGAAAAGAGGAAATT
GGTTTCATTCTGCACCTTATTTTGACAACACTGATGGTAGTGGAGTTTCT
TACCTCGCACGTGACCGTTGTATTGAGTTTTCAACGAGAATGCCATTGTG
AATACTGTGTATTTACACTTAATAATACAAGTAagcaatttatttttcta
aattctgtCATGATTCTGTACTCTTGTctggggggggtttcagggggtac
ccgattccgcaattccgtcaattttttctccaatttccgtcaaaccgtct
tatattgaaccaaaattccgtcaccgaaaattcctttgaaattcaatatt
tttggcgaaaattccgcaaattttgaatatccTtTACCagttccgaaatt
ccgcaaatttttttgctaaattccgtttttccgcactaaaattgtctaat
tttccgtctccgtcagagaacccaatttccgtaattccgtctaaattttc
gccaaattccgccactccgtccgaaaaaagggccgattccgctcctccgc
caaccatgaaaccccccccttgTCTGTGTAAGGCAGGAGAGGATAAAACT
AAATTTGGTAGTGGTTGCAACATCGGTGgctttttttcttattgaaaatt
taaagcatTTCCTAGTGAGGATGAGAggcgggggtgctccgctgaggttc
gaaaaatagaccctacgtgggactcaaaatttgcgaaaaattgaccctga
atgggactgaaattccaaaattttctcaaactttctactttttccccaaa
ttttccaaaaaagggcaccctacgaggaactgatttttctattttggtgt
ttttgcgaccctacctgggactcgtggaggttaaaaaaggtaccctgacc
agcggagcatccccgtaacccatattgccctagtaccccccctccCCGGG
AGGCCAATAAATTTTTCTAATGATGACGTTATGGCCAACTTTTCTCATCG
GAGAGGGTTTCTCATAAATTCTTTTACACAAGTTGTAATTTGCATTTTCT
TGAGTTTTGATCTCTTGTTGAACTcctttttgagaaagaaaaattaatca
acCTTGATTTGGTGTGCTGCCACGGCTCACGATGGGAATTTATTAGCAGG
GATATCATAATATTGACAATAATCTAGGATGGAAAGGTCCAAAAAGGATC
TTGCATTGAGagacccccttctcacagaaccaCTGGGAACactccccact
ggaaaaattggctaagATATTATTGGAAAATTATCTTCCGATTTCcctcc
ccactgaaaataatcaaataaaccgatcctcactgaaaaatcctatgcta
tttttccgacccaccccactaaattttctgacttgaaaagaaaagaattg
aaatacCCAGCCATAATAACTATGGAAAAATCAATCCTCATCGAGTTTGA
GTCcctttatttttatccccactgcctgaaaaaatcctaccgggtctgtg
ggGAGAGGGTGTATTGAGAAGATGATCAATTTAGAGTGTTCATGGTTTTA
AATTTCAGCATCATTACAAGACCTGATTGTGCAGGAAGTATTTCCTCCAC
CTTACGAAGAATTGGTTACAAACCCTTCACCAGCGATACAAGAAGGAGAT
CACAATGTAACACATCCTTCCAGTGAAGATCAAGATATTCAGCCACCTCT
TTATGATGAGATCAACAGAAGAGTATGA Coding sequence (CDS) from alignment at sc0000098_pilon:273554..276831+ >XLOC_012252 ID=XLOC_012252|Name=XLOC_012252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=792bp|location=Sequence derived from alignment at sc0000098_pilon:273554..276831+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTTTGGTAGCGATTGGGCTCTGCATTTTTGGATTTATATGTGTTTG
GTAGCGATTGGGCTCTGCATTTTTGGATTTATAAAGTACAATGAATGCCA
GCATTTGCAACATGGATGTTCTCGAAAAGAGGAAATTGGTTTCATTCTGC
ACCTTATTTTGACAACACTGATGGTAGTGGAGTTTCTTACCTCGCACGTG
ACCGTTGTATTGAGTTTTCAACGAGAATGCCATTGTGAATACTGTGTATT
TACACTTAATAATACAAAAAGTACAATGAATGCCAGCATTTGCAACATGG
ATGTTCTCGAAAAGAGGAAATTGGTTTCATTCTGCACCTTATTTTGACAA
CACTGATGGTAGTGGAGTTTCTTACCTCGCACGTGACCGTTGTATTGAGT
TTTCAACGAGAATGCCATTGTGAATACTGTGTATTTACACTTAATAATAC
AACATCATTACAAGACCTGATTGTGCAGGAAGTATTTCCTCCACCTTACG
AAGAATTGGTTACAAACCCTTCACCAGCGATACAAGAAGGAGATCACAAT
GTAACACATCCTTCCAGTGAAGATCAAGATATTCAGCCACCTCTTTATGA
TGAGATCAACAGAAGAGTATGACATCATTACAAGACCTGATTGTGCAGGA
AGTATTTCCTCCACCTTACGAAGAATTGGTTACAAACCCTTCACCAGCGA
TACAAGAAGGAGATCACAATGTAACACATCCTTCCAGTGAAGATCAAGAT
ATTCAGCCACCTCTTTATGATGAGATCAACAGAAGAGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:273554..276831 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 229-396:3111 |
| Aaloc | 43-225:1547 |
| Aaloc | 1-39:1 |
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