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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:284420..290096+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012251 ID=XLOC_012251|Name=XLOC_012251|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5677bp|location=Sequence derived from alignment at sc0000098_pilon:284420..290096+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTGTactgcaaaatatcaaaaaggtatattatatttttgtcatcc
ttttttttttaaatccttttactacatttttaattttcaattttaatccA
ATAAATTGGACTCACAATTTGTGTTGGTAATAGATTTGATCAAGAAATAG
GTAGGTTAATAAAGTGGAATGAATCGAGATACACAATTAGTTTTCGACAT
TGACATTTTATTCAATGTTGATGATTTTGATCTCAGTTTGGTTAGCTATT
TAGATTAGGTTGTGCTAATAAGCACAAAAAGGGAATCGATTTATTTTCCT
ATGAACTTAATTGCGAAATGggataagaattttttcaaaaaccaaaaatt
acaGTTCAAAACAATGTTGAAAGTAGACGCTAAAACAGAGtttttattat
tcttataaacgCGGTTTCGTAACGGCTAGTTAGTATTTGCATGCCAGAAA
TAGAATTGGTCACGTGATTAGAGATTCTAAAGCGCTTTAAATGCCGACCA
GGTTGTCCCATTGAATGTTTATTTGACAATTTTGTTTAGTCTGTTTCAGT
GTTTATATGTTAATGGTTGCCAATAGTAACTAAGAATTAGGGCTTGGGTA
ATCAGAACAGGGAAGTCTTAATTTTCCATGTTTTGGGAATCAAAAAGGTT
TTCAAGAAAGTAATTTAAGGGAAAGATGGCTGAAGAAGAAGTTGcttacg
ctttttttataagaacaaactatataagaacataaggtttcggtAGCCGA
AATCTTAGATCAAGTTAAggatattttaaggctttgggggcTCAAAACAa
ctgttttcttaggaaaatggacaaacaTACTcaagaaatgctgaaaataa
gaacttgttaagaacatttttaagcttgacacccaaaaagataagaaaat
gtGAGACTTTCTCTCCATCTCATGTTGTGCAAAATAAGGGAAGAACTTGC
TTcatatatttttagatatttggTCCAAAATTTCGATATGAACTGTGTTT
TTAATGTgggaaatgaaattaaaacctCTTCAAACCACTGTTGGGAACAG
tttcataatatttttcttctttacgtTTGTTCTTCGCTTTGGAGATTTAC
TTacttttctataagaataagAATTTTTCATGTTACGTAAATTATTTCGA
AATTTACCTACTACAGTTTTGTCCACTAAAAgcaatttactttaaaaaag
atgagttctttcatctttttcaatGTGCAATATTTCTTATATCCATAATT
CTCTCTCCCATTATTCTTTCacagaaataaaattttcaagaataaaaATA
AGGTGTTACagaaaatatcaagattaaaaatatcacaagagaaaacctag
aaagaaaaataacgaaaaattaTTAACTTTGATATCCAAATCATAGAAGA
GAAAgtaaaagaagattttaaatgtttttgggGATAATTGaaaaaaaCGT
GACAGAGTAAACCAAcacatcaatcaatcaatatggATGAGACAAAAAGA
CTAACAAGTAAGTTTTCTCTCCTTTTGTCTTCCGTGTTCTATCAAATTAA
TCTAATGTTTGAGCCCTAAAGGTAAAAAATTTGATGGTTGCCCTTTACTC
TTTCTAGCCATATCTCGGCTTTCTACTCTCTTCACAAATGCCATTTATTA
TTCTATTTATCATAAAAGTCCATGAAAATTGCAGCAAAATTCGTGCCCAA
CAACCTCTTGGTTCtctttttatgatattttttaaattcatgatattcat
gacgtaatgtgtTATATTGATGAATTACCCATTAGATTTCTTGTATAATG
TAAAATTAGTTGCAAACACCCAATCCTTTTTGAGTACTTTCGTATAAAAT
ATTACACTAtatgaatatcacgaatagcGCTCCCAATTTCATTACGTCCA
ttggtaaaataaaaagtgGGGCAAGTGGTTCTGAAGGATTTTAAATTGAA
GTTTacattcattttcaaaattttaaataactttaaaTTATCTCTAGGTT
ATTTGTTTATATTCGGAGCACTTTTTGCTCTTGTATTGGCTTCGAATCAC
AATAAATGGAACGGATGGAATCCGGAACAACATCCGCATGCTTTCGGATA
CACTGACCAAGATGGAAACTGCCAATGTGGTGGTAGTTCTCGAATGTCTG
ATATGTCGATGTTTAATTCTATGGAATTCCGCCCACCCCATTCCGCCTCT
ATGCACCCTAGTGGAAGCCTTTACCAATCAAAGATGGTATCATCATATGG
AGAAATGGTGTCTGCCTCTCAAGCTATGCAGCAAATGAATTCTTGTGCTG
AGAATGTAAGTTTCACCTCTTTTTATTTCGATAGAAATATTCTTCAATAT
ATATCTGATGATTGTATAGGCGGTACAAAAATTTAAATCGTGTGTCTCCC
ACCAAACACACGCGGCGCGATcagaaaagaaagattttagatGTTGTTGT
GGAGCAAGAAAGCTTTTATTGCTCCACAACAGCCTATCATTTTCGGAAAT
ATCAAAATGGTAGCATAAAGATGCGCAAactaaaaaggaagaaaaactcT
GCTGTATGCTGTATGTAGAAATACCCACCCTGTACCTAAATTCCCCTTCT
CATTTTCAGTCCTCATGTGTGATGCAATCAGTAAATGGTAGTGTAAGCCC
CAGTGCAAGTGCAAGCAGCATGTCAGCATCAATGTCTGCATCGGCATCAG
CAagtatttcatcatcagttttGGAACAACAATTCAGTTCAGCTGCAATG
TCTTCGTCCTCAGTTGGCAATGTTGCTGCTTCAAGTATGATTGCAAGCAG
TAGTGGTAGCATCTCACCATCGGGATCTATGATGGTATCACAAATGATGA
ACTCCATGAATAATTCTCAATACTGGTCTCAAGTTAAAGAGTCGATGTCT
GGCTATATGTCACACAATGCATCTCATGGTATGTCACGCCACATGTCACA
ACATCCTCACATGTCTTCAATCATGCCCTCAATGCATCATTCAATAATCC
ATTCAAGTGGCATGCAACACGGACAGCGATGTCTTTGCCCTGAATACCAA
TCAAGATACCCGGATATGAAATCGTCAAAAATGATGAAGGGAAGCTCGCA
CATGATCAAACCATCAAAAGCAATGAGTTCTATGATGAAGATGTCTTCAG
CAATATTGGATAGACCATTGATGAATTACACTGAACTGAATTCAAAAGAA
GGTTTTACTTTGAGAAGATCTGTAGCTATTGCAGGAGTCGTCAAACAATC
AGGGGAAATTGAAATGAAGGTTGATAGAAATGCACAATGGCAACAACTTT
CTTCTCCTTCAGCATCAGCAGCTATTGTTCTTCCCTCAGCTGGATATCTG
AGGTGAgagattttgcttgaaaactaTTGTTTGCACCACTttaaaaatct
gcaaagacattcctgttttgaaagtttataatTTCTCAGAATAAttaatg
agccccccccagcaggaccctcaattcacgcaatcacgcaattttttttc
gaaattcatgtattcacgcaaattttcctcgactTTCACGCAATAAtctg
attttttagaaaatcaggaaattttcgataaaaatcggggaaacattgga
aaatcgggaaaacattggaaaatccggaaaaCTACCCATAATTGGTGGAA
AGaggggaaaattcacgtattcacgcacaaaatagcccagattcacgcat
tcacgcaatcaaaaagtggattttcacgttcacgcaagttttttcaattc
acgcattcacgaattatttttcaaattttcacgcattcacgcaactgAAA
aggcccattcacgcattcacgcaaaccgctggggggggccatTAATGTCC
AATTTAATCCTTAAAAATTCTGAATTCTAGGGCTATAAATGAGTTTTAAT
TCTGACCTACTTATGaaagaaattgtcaaaattttgaagcaccacttaaa
ttcaaaaatctcaTTTCTTTTCAGATTTGTGCCATCAAACAAGGAATATT
ATGGAGTAGCCAAGCTAAGTATTGTTGCTACAAATAAACTGTCTGGAACA
GACGATACAACTGGATCTACGCCCAGCTTTGTTTACATTCTGATTGAGCC
AGAAGAAGTTAAACCAAGGTTTAATGGAACTGCACCTGCAATTTTCTTCA
CCATTGACGAGGATAGCCCATGTCAATCTTTCCAGGTGATTaaaataaat
tgttcttatttatatAGGCTTAAGGAGTGTTGTCGAGAACATGATAGAAG
CAAGGATTCTTATTGATTGTTCATATAACTGATATTAACTTTGACTGCAT
TGATCGTTGTATAACACTGAATTCTTACTATTATCAACACGTTTATTGAT
AGGCAGTTCAAAGTCATCACATCACCAAGGttttaatataattcaatttg
aaaaaattttaacaaaatatttcaaaatttaTTtttagcCTTCCAAGATG
AATTCCAGTTATTCTGTAAGTTTTACTGTTTGTTTTAAACTCCCAAAAGA
ATTTCaatctttacattttttgctaaatttttattaagtttatccttttt
tgctactcctttaaagaaactatattttttcttatcttcgatCACTAACC
AAAACACTCTTTCTTTGATTCTTTGAtaatatgatttttaaaacatgTAT
TCTAAAAACTTTACAGAGCTTGAAAATGAATACCTTTGACTTTGATGAAA
GCAAATTTACATCGTATATGAGTGAAATTGATGCCGACAAGTTTGGCATG
TTTAAAAGCAATGTGGAAATGAGAAACAACTATACTCAAGGGGCATGGTT
GAGACGTGCAGCATCTGGAAGTGGTACGGTTCTTtttcagtttgttctta
aaactCATTGTTTATGACGCAAATGATGCTACTAAAATTATGACCCTCTT
AAACTCTGACAGTGACTTTAAGTTTGTAAAATTGTCAAATATTTATGGAT
TGTTTTACATAAATTACTTTAAACCATACAATACAATTCCTAAAACTTCT
CTTGTAAATAATAAATAcgtttttgtttatcattaaTGCTAGTGTTCCTT
TCTTCTCGTAAATAATAAATACGTTTTTGTTCGTCATTAGTGCTATTGTT
CCTTAATGATATTCTTTTATCCTCTGAGTTGCACATGCAGTAGACTCTTC
CCCCATTCGAACCTTTGAATTATGAACAGTCACCTAATACATACAAAATG
AGTGTATACATGATAAAAAgacaataaatatttcaaactcTTTATTTCAC
AGGACGTTGGTTTTATACGACCAATGGTAAAAAGAAGCCATTTGAACAAT
CGTGGGCAAAAACCAGGAAAGTGGCAGAGATCTCGAACTTTGCATTATGC
TTCGTGCCTGCACCTGATGTTTTTGGCTTTGTGGAGCTTCTCATTTCTCC
AGCATTTATTGTTGGTAAAGGTAAAGGAAATGATAAAGGACAAGGAAAGG
ATGGAATCATATATGGTGACCAAGAATATAAACTGGTTATTAAGATCAGA
GATATTAATGATCGTCCAATTATCAAGGATCCAAAACTAGATGTCAAAGC
ATTACCATACAATATGAGTGGATTCTCTAACACTGGATTTCAAGTATCTC
AATTATTGGAAAAGAGTAGCCGTGGAAAAAAGAGATCAGTCTTCGCTGAT
AAGGATGGTGATACACTAGGTATGTAA Coding sequence (CDS) from alignment at sc0000098_pilon:284420..290096+ >XLOC_012251 ID=XLOC_012251|Name=XLOC_012251|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3798bp|location=Sequence derived from alignment at sc0000098_pilon:284420..290096+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTGTactgcaaaatatcaaaaagATGCAGTGTactgcaaaatatc
aaaaagGTTATTTGTTTATATTCGGAGCACTTTTTGCTCTTGTATTGGCT
TCGAATCACAATAAATGGAACGGATGGAATCCGGAACAACATCCGCATGC
TTTCGGATACACTGACCAAGATGGAAACTGCCAATGTGGTGGTAGTTCTC
GAATGTCTGATATGTCGATGTTTAATTCTATGGAATTCCGCCCACCCCAT
TCCGCCTCTATGCACCCTAGTGGAAGCCTTTACCAATCAAAGATGGTATC
ATCATATGGAGAAATGGTGTCTGCCTCTCAAGCTATGCAGCAAATGAATT
CTTGTGCTGAGAATGTTATTTGTTTATATTCGGAGCACTTTTTGCTCTTG
TATTGGCTTCGAATCACAATAAATGGAACGGATGGAATCCGGAACAACAT
CCGCATGCTTTCGGATACACTGACCAAGATGGAAACTGCCAATGTGGTGG
TAGTTCTCGAATGTCTGATATGTCGATGTTTAATTCTATGGAATTCCGCC
CACCCCATTCCGCCTCTATGCACCCTAGTGGAAGCCTTTACCAATCAAAG
ATGGTATCATCATATGGAGAAATGGTGTCTGCCTCTCAAGCTATGCAGCA
AATGAATTCTTGTGCTGAGAATTCCTCATGTGTGATGCAATCAGTAAATG
GTAGTGTAAGCCCCAGTGCAAGTGCAAGCAGCATGTCAGCATCAATGTCT
GCATCGGCATCAGCAagtatttcatcatcagttttGGAACAACAATTCAG
TTCAGCTGCAATGTCTTCGTCCTCAGTTGGCAATGTTGCTGCTTCAAGTA
TGATTGCAAGCAGTAGTGGTAGCATCTCACCATCGGGATCTATGATGGTA
TCACAAATGATGAACTCCATGAATAATTCTCAATACTGGTCTCAAGTTAA
AGAGTCGATGTCTGGCTATATGTCACACAATGCATCTCATGGTATGTCAC
GCCACATGTCACAACATCCTCACATGTCTTCAATCATGCCCTCAATGCAT
CATTCAATAATCCATTCAAGTGGCATGCAACACGGACAGCGATGTCTTTG
CCCTGAATACCAATCAAGATACCCGGATATGAAATCGTCAAAAATGATGA
AGGGAAGCTCGCACATGATCAAACCATCAAAAGCAATGAGTTCTATGATG
AAGATGTCTTCAGCAATATTGGATAGACCATTGATGAATTACACTGAACT
GAATTCAAAAGAAGGTTTTACTTTGAGAAGATCTGTAGCTATTGCAGGAG
TCGTCAAACAATCAGGGGAAATTGAAATGAAGGTTGATAGAAATGCACAA
TGGCAACAACTTTCTTCTCCTTCAGCATCAGCAGCTATTGTTCTTCCCTC
AGCTGGATATCTGAGTCCTCATGTGTGATGCAATCAGTAAATGGTAGTGT
AAGCCCCAGTGCAAGTGCAAGCAGCATGTCAGCATCAATGTCTGCATCGG
CATCAGCAagtatttcatcatcagttttGGAACAACAATTCAGTTCAGCT
GCAATGTCTTCGTCCTCAGTTGGCAATGTTGCTGCTTCAAGTATGATTGC
AAGCAGTAGTGGTAGCATCTCACCATCGGGATCTATGATGGTATCACAAA
TGATGAACTCCATGAATAATTCTCAATACTGGTCTCAAGTTAAAGAGTCG
ATGTCTGGCTATATGTCACACAATGCATCTCATGGTATGTCACGCCACAT
GTCACAACATCCTCACATGTCTTCAATCATGCCCTCAATGCATCATTCAA
TAATCCATTCAAGTGGCATGCAACACGGACAGCGATGTCTTTGCCCTGAA
TACCAATCAAGATACCCGGATATGAAATCGTCAAAAATGATGAAGGGAAG
CTCGCACATGATCAAACCATCAAAAGCAATGAGTTCTATGATGAAGATGT
CTTCAGCAATATTGGATAGACCATTGATGAATTACACTGAACTGAATTCA
AAAGAAGGTTTTACTTTGAGAAGATCTGTAGCTATTGCAGGAGTCGTCAA
ACAATCAGGGGAAATTGAAATGAAGGTTGATAGAAATGCACAATGGCAAC
AACTTTCTTCTCCTTCAGCATCAGCAGCTATTGTTCTTCCCTCAGCTGGA
TATCTGAGATTTGTGCCATCAAACAAGGAATATTATGGAGTAGCCAAGCT
AAGTATTGTTGCTACAAATAAACTGTCTGGAACAGACGATACAACTGGAT
CTACGCCCAGCTTTGTTTACATTCTGATTGAGCCAGAAGAAGTTAAACCA
AGGTTTAATGGAACTGCACCTGCAATTTTCTTCACCATTGACGAGGATAG
CCCATGTCAATCTTTCCAGATTTGTGCCATCAAACAAGGAATATTATGGA
GTAGCCAAGCTAAGTATTGTTGCTACAAATAAACTGTCTGGAACAGACGA
TACAACTGGATCTACGCCCAGCTTTGTTTACATTCTGATTGAGCCAGAAG
AAGTTAAACCAAGGTTTAATGGAACTGCACCTGCAATTTTCTTCACCATT
GACGAGGATAGCCCATGTCAATCTTTCCAGcCTTCCAAGATGAATTCCAG
TTATTCTcCTTCCAAGATGAATTCCAGTTATTCTAGCTTGAAAATGAATA
CCTTTGACTTTGATGAAAGCAAATTTACATCGTATATGAGTGAAATTGAT
GCCGACAAGTTTGGCATGTTTAAAAGCAATGTGGAAATGAGAAACAACTA
TACTCAAGGGGCATGGTTGAGACGTGCAGCATCTGGAAGTGAGCTTGAAA
ATGAATACCTTTGACTTTGATGAAAGCAAATTTACATCGTATATGAGTGA
AATTGATGCCGACAAGTTTGGCATGTTTAAAAGCAATGTGGAAATGAGAA
ACAACTATACTCAAGGGGCATGGTTGAGACGTGCAGCATCTGGAAGTGGA
CGTTGGTTTTATACGACCAATGGTAAAAAGAAGCCATTTGAACAATCGTG
GGCAAAAACCAGGAAAGTGGCAGAGATCTCGAACTTTGCATTATGCTTCG
TGCCTGCACCTGATGTTTTTGGCTTTGTGGAGCTTCTCATTTCTCCAGCA
TTTATTGTTGGTAAAGGTAAAGGAAATGATAAAGGACAAGGAAAGGATGG
AATCATATATGGTGACCAAGAATATAAACTGGTTATTAAGATCAGAGATA
TTAATGATCGTCCAATTATCAAGGATCCAAAACTAGATGTCAAAGCATTA
CCATACAATATGAGTGGATTCTCTAACACTGGATTTCAAGTATCTCAATT
ATTGGAAAAGAGTAGCCGTGGAAAAAAGAGATCAGTCTTCGCTGATAAGG
ATGGTGATACACTAGGTATGTAAGACGTTGGTTTTATACGACCAATGGTA
AAAAGAAGCCATTTGAACAATCGTGGGCAAAAACCAGGAAAGTGGCAGAG
ATCTCGAACTTTGCATTATGCTTCGTGCCTGCACCTGATGTTTTTGGCTT
TGTGGAGCTTCTCATTTCTCCAGCATTTATTGTTGGTAAAGGTAAAGGAA
ATGATAAAGGACAAGGAAAGGATGGAATCATATATGGTGACCAAGAATAT
AAACTGGTTATTAAGATCAGAGATATTAATGATCGTCCAATTATCAAGGA
TCCAAAACTAGATGTCAAAGCATTACCATACAATATGAGTGGATTCTCTA
ACACTGGATTTCAAGTATCTCAATTATTGGAAAAGAGTAGCCGTGGAAAA
AAGAGATCAGTCTTCGCTGATAAGGATGGTGATACACTAGGTATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:284420..290096 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1477-1899:5255 |
| Aaloc | 1318-1473:4667 |
| Aaloc | 1291-1317:4439 |
| Aaloc | 1081-1290:3976 |
| Aaloc | 337-1077:2610 |
| Aaloc | 31-336:2000 |
| Aaloc | 1-27:1 |
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