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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:306258..310125+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012249 ID=XLOC_012249|Name=XLOC_012249|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3868bp|location=Sequence derived from alignment at sc0000098_pilon:306258..310125+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAGACAAGATGGAGTGTCTATGGATAGCCAGCATACTTGCATCCATACC
ACAAGTTTACAACCAAATCATCCGTGAAGATAAGTGTCAACTATTTGTTA
CAAGTTTCGATTGGGTTGTGAAGGGCCGATTAACGTTCGGTAAGATGACA
TTTCCGAAAACAGCAATGAGTCTTGGTCGGTGTATATCAAGCTGTGTTCA
TTTTGAGAGTGAGCGTGGTGTAAAAGAATGTCGATCCATTAATTATAATC
CCGCATTGAGCCAATGTGAAGTCTTTAAGAAAGAATTGACCATGGCAGTA
CCTGCTATTTTATTCAAAGATGAAGCGCCGTTGTTTGAGGATGTTTCAGG
ATGGTTTCATTACAGCCCTAATCCAAACACAACAATGGTAAGAgtataca
ctttataagaacaaactatataagaacataaggattccattaccaaaata
ttgagaacaagtttagaacgttttaagactttgtggacTCTTAAACTACC
GATTTCTTAGATGGATGAAAATACCCAAATatggtaaaaagaaaaacata
taaagaacatttttagacttaaaacttaaagttaagagcatctgaaggct
taaaaaattttggatgctgctacgaaaaaaattacaaatagtCCAAGAGA
ACCATATCATGTCAGGAGATTAGACACATTAGAGAggaaaaattggcgtt
tttggCACCCTCAGAAAGGCTTTTCTCGAAATGAGAGAAAAagaattgac
gttttttggacctttagagagacttttctttttaattttttcaaagcgaa
gtagtttgaagttttaccacccgctacctttctatcattcagtcagTTCC
GCGCAGCCTTCCTAAATCGAGTGGCACCGAAGGCGCCTAAAAGAAAAAGg
ggactctaagctatccaacggactataaacgaacttctaactccttctag
atctggagatataagcctttaaagtttgaactagcgattttctttaaaaa
acttgaccgtggcacttaaagggttaaactgTTGAATTTTGTAGTGCTCA
GCGAGTGTTTCATTTAAAAACCCTAACAAATACCCTAATCGGTAGGAAGG
AAGGAAGGGATTCATAAAAAACCGACAAACCGTAAGGGTGtcttcccggg
ggggggggcactcgttCTAAAAAGTTTGACATCCTTCTGCCTCATTCTCT
TCGTCAGACCTTATCAGACCCTTTcaaaaaggtaatttttgaGACATACA
GATGGGAGATGTACACATGCACATGTAAAGGTAAAACatatccttacagt
gcagcacTGGTCAAAACATACCCTTACGGTGCACTAGCTGAACCTTGaaa
aaaaaCGACTCATAAGTGCCGCACGTTTGATATATCATTTACCTTGATTG
atccctccccccccccgggtgtatTTTAGAGGGAATCCACTAAAAGATTC
GATAACTAAAAAGATAACACTATAGTAATCTAACAAGTTAATGTCAGAAG
ATGGGGATGAAAAGGTGGCAGGTGTTTGCTAGAATTGGAGTTGCAGTTGG
AAAGGTTAGTGAGAGGGTTCTGATAAACTGCCGTTTCCAAACCTTCGACA
ATTTTTTCCTTACCAAAGTTCTAAGCTCACTTTTCCAAGGGATAGCGCTC
TAACCCTACTGATGTGCCAGTTTCTGAAAAGATGTACCTCAAAAGTAACC
AGGAAGGAGCATACGATGCTTGGTCGTACAATGATCCAAAGAATCTAATG
ACTCATTTTCCTCTACTTTTGAAAAGATGTACCTCAAAAGTAACCAGGAA
GGAGCATACGATGCTTGGTCGTACAATGATCCAAAGAATCTAATGACTCA
TTTTCCTCTACTTTTGAAAAGATGTACCTCAAAAGTAACCAGGAAGGAGC
ATACGATGCTTGGTCGTACAATGATCCAAAGAATCTAATGACTCATTTTC
CTCTACTTTTGAAAAGGTTGGGCCGAAATGCGCAGCTGAAGGAAATCCAT
GTGGTGTTGGCAAATGTACGGATACTTGTGACAGCTTCAAATGTGAATGC
AATGTTGAACAATTGAAAGAGGACGACGTCTGCAAACTCAAAGATCGTAA
GTTACATTTGACAGTGATTTTCATGGGAGTTTTAAGGGTTCAAGATTTCT
CAAGCATCAAATAAGAGGTAGATATTTTCATCTTTGTAATATACAGAGGC
AGAGATAAATTCTATGACATTTTCGAAACAACGGCTTCTGACAGATTTTT
TGAACTTGATGAACACACTGGATAAATACAAGGATGTCTAAATTAACCGt
catttataattatttttgctgggaaaataaaccaatcagaaCGCCGCTTT
TTAACTGGCGTCACAACCCACGTTTCTGTAAACAATGAAACGCGGGATCT
CCCGCAGAAActttggacatgccgtaactcactcGAGCATTTGTTTCGct
tcaaaataaagtcaaaGTTTGAGATAAAATGAATTAAACAGTTAACGAGG
CTAGCCATCGAGGGAGTGACCTAAAAAGACTCAAAAATATGCAACCAATT
ATACATAGTCCCTTTTCAAAGTACATTGAAGTAAACATATGATTAATTTA
TTACAGCAAAAAGCTTCTGCAAATTGAACAATTTCATTGGAAGAGAAATG
ACTGTTTCCGATAACAATCAAAAGTTGAATGTCAAAACTGCAACGGAGAT
TGAAGCTGTTGATGGGACAACATACACATTTGAATTGGACCCAACCGAAG
AGGGATGCGTTTTTGTTGAATCTACTACTAGAGCATCTACAATTTCCTTT
CTTTATAAGACATGTCAATTCTACGATTCACACAATTCGCTTACTTATTC
ACTTGACACGTGTGACTACAGTATGTATTTAACCGATTTAACAGGCCCTT
CTGCATATCAATATTTGTCAATTTGGCagaaaagtcttcttttttcattt
acattcttcattttttcaaagtctATTTCAGCCTAGACAGTGTCTTACTT
AGTCCCATTATACCAAGAGAAATTAACTCCTGGTCGTGAACTTTAAAGAA
GATACGAAGACAGCTTAGCTATAAAGGCTCAATCAAACATATTccttaaa
ttttctttgttagAAGAAGCACAAAAGCTGGTTGGGCTGTATGACCACGG
AAAGATATTTGTCAGCCGTTACGGTATTCATGGCGGCTTCCGAATCAAAT
CGAACAAACTTGATCATCTTCTTGACGGGACCGTTACTGGAATCACCACA
ACTGACGCAGGCGACTTTCAAATTGCAGTGAATTTCTATAATCAATTTGA
ACTGACCGGATTAATCGATTGTACCATCATTCTAAAAAGGTTTGACGATG
GTGAAACAATGACCTGGAGAAAAATTGGTTGTCAAATACCATCAGGTAAG
ACATTGGAACCTAGTCTCTCCTGAAAAGGCTTGATTTTTATAACCATTCA
ACATTTTAACGTTGAAAGCCTAATTGAAAGGGACgttctggagtttttat
aagatacttcagtaattggtcatttgaagtaataaaaatgacgcattctt
tagaaaaagcaataaaattgttgtattactggttaacgaccaaccaaatc
aagaaagagcttgtaaaaactccagcttgtcccaattgaaaatgttaaaa
cGCGTGGACGCATGCGCGCTACGTAGTTTGCATAATAACCATGATTTGAT
GATTTGACTAAGTGACGGTTCTTCATGGGTTTTAGATTTAGTTTTATGAC
AGAGCGTTTTTTATCCATACTCCTTATAAAGGaaatggagataaaaataa
atctttttgtaaCAAGTTTccaatactttttttttttagttacgCCTACT
CCTACGCCAAGTCTATAA Coding sequence (CDS) from alignment at sc0000098_pilon:306258..310125+ >XLOC_012249 ID=XLOC_012249|Name=XLOC_012249|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2184bp|location=Sequence derived from alignment at sc0000098_pilon:306258..310125+ (Clytia hemisphaerica_ch_hm2_pilon)
CTAGACAAGATGGAGTGTCTATGGATAGCCAGCATACTTGCATCCATACC
ACAAGTTTACAACCAAATCATCCGTGAAGATAAGTGTCAACTATTTGTTA
CAAGTTTCGATTGGGTTGTGAAGGGCCGATTAACGTTCGGTAAGATGACA
TTTCCGAAAACAGCAATGAGTCTTGGTCGGTGTATATCAAGCTGTGTTCA
TTTTGAGAGTGAGCGTGGTGTAAAAGAATGTCGATCCATTAATTATAATC
CCGCATTGAGCCAATGTGAAGTCTTTAAGAAAGAATTGACCATGGCAGTA
CCTGCTATTTTATTCAAAGATGAAGCGCCGTTGTTTGAGGATGTTTCAGG
ATGGTTTCATTACAGCCCTAATCCAAACACAACAATGCTAGACAAGATGG
AGTGTCTATGGATAGCCAGCATACTTGCATCCATACCACAAGTTTACAAC
CAAATCATCCGTGAAGATAAGTGTCAACTATTTGTTACAAGTTTCGATTG
GGTTGTGAAGGGCCGATTAACGTTCGGTAAGATGACATTTCCGAAAACAG
CAATGAGTCTTGGTCGGTGTATATCAAGCTGTGTTCATTTTGAGAGTGAG
CGTGGTGTAAAAGAATGTCGATCCATTAATTATAATCCCGCATTGAGCCA
ATGTGAAGTCTTTAAGAAAGAATTGACCATGGCAGTACCTGCTATTTTAT
TCAAAGATGAAGCGCCGTTGTTTGAGGATGTTTCAGGATGGTTTCATTAC
AGCCCTAATCCAAACACAACAATGGTTGGGCCGAAATGCGCAGCTGAAGG
AAATCCATGTGGTGTTGGCAAATGTACGGATACTTGTGACAGCTTCAAAT
GTGAATGCAATGTTGAACAATTGAAAGAGGACGACGTCTGCAAACTCAAA
GATCGTTGGGCCGAAATGCGCAGCTGAAGGAAATCCATGTGGTGTTGGCA
AATGTACGGATACTTGTGACAGCTTCAAATGTGAATGCAATGTTGAACAA
TTGAAAGAGGACGACGTCTGCAAACTCAAAGATCCAAAAAGCTTCTGCAA
ATTGAACAATTTCATTGGAAGAGAAATGACTGTTTCCGATAACAATCAAA
AGTTGAATGTCAAAACTGCAACGGAGATTGAAGCTGTTGATGGGACAACA
TACACATTTGAATTGGACCCAACCGAAGAGGGATGCGTTTTTGTTGAATC
TACTACTAGAGCATCTACAATTTCCTTTCTTTATAAGACATGTCAATTCT
ACGATTCACACAATTCGCTTACTTATTCACTTGACACGTGTGACTACACA
AAAAGCTTCTGCAAATTGAACAATTTCATTGGAAGAGAAATGACTGTTTC
CGATAACAATCAAAAGTTGAATGTCAAAACTGCAACGGAGATTGAAGCTG
TTGATGGGACAACATACACATTTGAATTGGACCCAACCGAAGAGGGATGC
GTTTTTGTTGAATCTACTACTAGAGCATCTACAATTTCCTTTCTTTATAA
GACATGTCAATTCTACGATTCACACAATTCGCTTACTTATTCACTTGACA
CGTGTGACTACAAAGAAGCACAAAAGCTGGTTGGGCTGTATGACCACGGA
AAGATATTTGTCAGCCGTTACGGTATTCATGGCGGCTTCCGAATCAAATC
GAACAAACTTGATCATCTTCTTGACGGGACCGTTACTGGAATCACCACAA
CTGACGCAGGCGACTTTCAAATTGCAGTGAATTTCTATAATCAATTTGAA
CTGACCGGATTAATCGATTGTACCATCATTCTAAAAAGGTTTGACGATGG
TGAAACAATGACCTGGAGAAAAATTGGTTGTCAAATACCATCAGAAGAAG
CACAAAAGCTGGTTGGGCTGTATGACCACGGAAAGATATTTGTCAGCCGT
TACGGTATTCATGGCGGCTTCCGAATCAAATCGAACAAACTTGATCATCT
TCTTGACGGGACCGTTACTGGAATCACCACAACTGACGCAGGCGACTTTC
AAATTGCAGTGAATTTCTATAATCAATTTGAACTGACCGGATTAATCGAT
TGTACCATCATTCTAAAAAGGTTTGACGATGGTGAAACAATGACCTGGAG
AAAAATTGGTTGTCAAATACCATCAGttacgCCTACTCCTACGCCAAGTC
TATAAttacgCCTACTCCTACGCCAAGTCTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:306258..310125 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1066-1092:3842 |
| Aaloc | 784-1062:3116 |
| Aaloc | 520-780:2609 |
| Aaloc | 388-516:1967 |
| Aaloc | 1-387:1 |
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