XLOC_012243 (mRNA) -

Overview
NameXLOC_012243
Unique NameXLOC_012243
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:223979..225517-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012243 ID=XLOC_012243|Name=XLOC_012243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1539bp|location=Sequence derived from alignment at sc0000098_pilon:223979..225517- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAAGTTAGAGTTTAGCATAGCTATGGTGGTATTGATAGGGCGTTG TGGAATCTATGGAAGCCAAGATGAATCTCAAAAGAGTAAGATTTTGAAAG CTACTTTGTAGATGGTTAAAAACTAAGTGTTCATGTAGATTGACATATTT GTAATAGTCTTGAAGCACTACATTGATGCAGAATTTGCTTGAGTATCGCT AACATCTCTGTGTCACAAACCTAAGGATTTTATTTTTACCCACTGATAAT TTTGACCAAAAAGTCTCTGGAATTTCATCTCCAGTGGGAAATTGTAAACA ATATTATTATTATTATGAAATTATTCGTCGGAACCATCCCACTGATATTT TTATACCAAAAAACAAAATTTCCATCATGGCACTGATACAGGATGTCTAT AAAATTGCACGTTGAGTGAATTATGATAAATCAAATTTTTTAGTGTTTCT CTAAAGTTTGTTGAAATTCTCGCATTTGAAACTGCTGTTAGAAAAACACG ATACTACCCACCACACATCGCGACTGTGAATTGACGTATTAAGTATTCGG ATGAGCACAAACAGATAATCTACTAATAAAGTCATTTGGTTTTCCCTTTC AGCTCCCTTCTTCGACGAACAGAACGAAAATTCGTACGAAAAGTTCCTCA TCACTGACCCATACAGAGAAATCAAATTCCAAAAACCCATCTTTAAAAAT TTCTCCTCCATTTTTGTGAGTGTTTCATCTTTGTTACTTGAATAAAAATA CTTCAGTTAAAAAAAAACACAACCTGGAAAATCTTCATAAATCATCTTGT GTGCTAACATGTTTAAAGTAGGTTTGTTTTGTATTCAATGATATGTATTT GAAACCGGAATCTAACCTTTATCCATATTGGTGGAAACATTAATCGGAGT TTTCAGAGAAAAGTGATGCTAAGCTCACTGACTGCATCTTTTCAAGTTAA TAACTTTTGAGATGATACCAGTCTTGTTTTTTAAGGACCTTGGATGTTTT CTTATGACTTTCCGTAATCCTTGCCTAGTAAAGCATCATTTATAATAATT GACTGTTCATTTATAACATTGACTTTCTAGATCAATCACAACGGAATTTT AGGATTCGATCATAATGTTCATCGCGCTCTTATCCCATCTTCGGACGCCC AATTCATCGCCCTTTATCACAAGAAAACCACCCTTTCGCTCACTTCCGCC ATCTTGTTCCGACACACAGATCAGCCATCAGCGTTAGCGGAAATCCGCGA AATTATACGCGAAAACTTTGACCGTAGTTATGAGCCGACATCAGCTTTAA TCGTAACCTACCGTGATGTTTGTGATCAAATGATTCAAGAGAAAAAGTTC ACCTACCAAGCTACCATAGTAACAGATACAACAAATATCTATCTTTTGAT CAATTACCAGAGTCTTGGCATGTCCGGTGCAGTGACCGGCTATTCTTTCG ATGAGAAATGTGAGTTTGAAGCCTTCGCTCCGGTCACCACAAGTGAGAAG TTACAACAAACATCCAATATTGGAAAGAAAGGCTTGCAC

Coding sequence (CDS) from alignment at sc0000098_pilon:223979..225517-

>XLOC_012243 ID=XLOC_012243|Name=XLOC_012243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1314bp|location=Sequence derived from alignment at sc0000098_pilon:223979..225517- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAAGTTAGAGTTTAGCATAGCTATGGTGGTATTGATAGGGCGTTG
TGGAATCTATGGAAGCCAAGATGAATCTCAAAAGAATGTTTAAGTTAGAG
TTTAGCATAGCTATGGTGGTATTGATAGGGCGTTGTGGAATCTATGGAAG
CCAAGATGAATCTCAAAAGACTCCCTTCTTCGACGAACAGAACGAAAATT
CGTACGAAAAGTTCCTCATCACTGACCCATACAGAGAAATCAAATTCCAA
AAACCCATCTTTAAAAATTTCTCCTCCATTTTTCTCCCTTCTTCGACGAA
CAGAACGAAAATTCGTACGAAAAGTTCCTCATCACTGACCCATACAGAGA
AATCAAATTCCAAAAACCCATCTTTAAAAATTTCTCCTCCATTTTTATCA
ATCACAACGGAATTTTAGGATTCGATCATAATGTTCATCGCGCTCTTATC
CCATCTTCGGACGCCCAATTCATCGCCCTTTATCACAAGAAAACCACCCT
TTCGCTCACTTCCGCCATCTTGTTCCGACACACAGATCAGCCATCAGCGT
TAGCGGAAATCCGCGAAATTATACGCGAAAACTTTGACCGTAGTTATGAG
CCGACATCAGCTTTAATCGTAACCTACCGTGATGTTTGTGATCAAATGAT
TCAAGAGAAAAAGTTCACCTACCAAGCTACCATAGTAACAGATACAACAA
ATATCTATCTTTTGATCAATTACCAGAGTCTTGGCATGTCCGGTGCAGTG
ACCGGCTATTCTTTCGATGAGAAATGTGAGTTTGAAGCCTTCGCTCCGGT
CACCACAAGTGAGAAGTTACAACAAACATCCAATATTGGAAAGAAAGGCT
TGCACATCAATCACAACGGAATTTTAGGATTCGATCATAATGTTCATCGC
GCTCTTATCCCATCTTCGGACGCCCAATTCATCGCCCTTTATCACAAGAA
AACCACCCTTTCGCTCACTTCCGCCATCTTGTTCCGACACACAGATCAGC
CATCAGCGTTAGCGGAAATCCGCGAAATTATACGCGAAAACTTTGACCGT
AGTTATGAGCCGACATCAGCTTTAATCGTAACCTACCGTGATGTTTGTGA
TCAAATGATTCAAGAGAAAAAGTTCACCTACCAAGCTACCATAGTAACAG
ATACAACAAATATCTATCTTTTGATCAATTACCAGAGTCTTGGCATGTCC
GGTGCAGTGACCGGCTATTCTTTCGATGAGAAATGTGAGTTTGAAGCCTT
CGCTCCGGTCACCACAAGTGAGAAGTTACAACAAACATCCAATATTGGAA
AGAAAGGCTTGCAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_012243XLOC_012243-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:223979..225517 -
Properties
Property NameValue
Aaloc199-657:460
Aaloc88-198:936
Aaloc1-84:1540