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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:249294..254716- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012239 ID=XLOC_012239|Name=XLOC_012239|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5423bp|location=Sequence derived from alignment at sc0000098_pilon:249294..254716- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGATTACAACATGTTGCAGATGTTCACACCTACAACAATTTATCCG
AAGAATCAAGTACCAAACAAGACATCTGACCACAACAACACAAGTTTGCA
ATATGAATATTTTTGATCAACAAACCAAGATTCACCAAAAGAATATGGCA
GCACAGCTACCTGATCATCAAGTTTATGATTATCTACGAGATGAGGTTAG
AAATTGTGATACCTTAATTTGTTAAACCATTCTTGAGATCCGTTTAGTTC
TGAAGTTGCTCGAAAAAAGAGGTTACAGTAGTACCCCTCCTATTTACGAG
TGCAATCTTTTGGTTTTTAATTTATAGTCAGTGATATCATCTACTGATCA
ACTGGAGAGGACATGTTCCGGACAAACATTCTTGAACTGGTAAATACTTC
TGGTAAAGGTAGCATTTTGTTCGTTTTGCGTAGTAGGTGACATGAAAATT
AGCTTCGTTTTTGATTCTCTTATTATTCAGGTTGCTGAAAGAGTAGCTGA
TCGATTGGCAGACATAACAAGGTAAGATTGTCCACTTGTTTGTCTGAAGA
CCACTTCAATGAGAAGGTAAAGAAATTTGAACGACCAAAGGAATTTTTTT
CTACCCAAAATTGAAGAGTAGTCATTACGACAGATACTTCGAGTTAAATC
GACTTTTGAAAATTGATCGAGCAATTTTGACAGCAAAAACAAATTTGAAA
ATAAAATTTCTCACTCTCATACGATCAAAATCCCCTTCATTCTTAACCAT
CAAAATATTTACTTTAGATTCTTCCCAAAAGCACTTGACATCGGAGCCGG
TAAAGGATATTTAGCGAAACAAGTCCACAAAGATGAAGTTGGACATCTCT
ATCTCCTGGAAAACTCTGAGAAAATGCTGGTAAGTGAAGGTGTACAAGGA
TTAAGTATGAATATTAGCTTTCTTTTGTAAAAGTAAAACCAGCTTTTTCG
CACCAAATCACCTAAAGGTCATTTTTACCAGTTAGGTTTAGATCCCCTTC
ATACTTTTTCGTCTGTTTTAAAATTGATGTTGATTTTAGATGGATTTGGG
CTCAATTTTTGGACCTAAGGTCCTATAAATGAGATAATCTTGTGCAAATG
AACTGATTTTTTGCAAAAAAAAACTTTTTTACTTTGTGATTTCATTAATT
TTTTTTGATTTTTGCATGAAAGTAGGTACCATCATAGGTAAAAGATGGCT
CAAGCAGAATTTTGCAAAAAAATTTTGTTGGCTCAAAAAACGCATGTTTA
TCTTTAAGAATTACTATTAATAAGCATACATCAATGTTCTTAGTCAAATT
ACTCAATTTTTTTATGAGATAGATGTTTTTTTTGCTCATGAGGGCTTACT
TTTGAAGAATATGTGTGTTTAAGACAGGAAATTTTAGTTGCTTGACGTGT
TCTTATAGAAAAACTGGCCAAATTCGATATTTTTTATAAGCACATTATCA
ATTATTTAGGTATTAGCTTTTCTCGAGATTGGCTTTTTCATTCTTTATGA
TATTTTGCACAAAGATGCAAGGCTATAAACCTTCGAATGTGACGGAGTCC
GATTTTCAAATAAAAATGTTATTGGGCAAATTTGGGCCAAAGAACGGCTA
AAAAACGGGTTTTTGGACTTCGTGAAATATTGGATCATTGTTTTTTTCTG
TTTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGTAAA
AAAAGAATTTTTCGGCTCAAAAAACGCATCTTTATCTATAAGAATCACAA
TTAATAAGCATACATCAATATTCTTAGCCGAATTACTCAATTTTTTGATG
AGATTATCAAATTGGTTGATCCTCCTGAATGAGTTCAATAAAAATTTCAA
ACACAGAATCGACTTCATTTTATTTTCATAAAATCAAAATTTATTCAAGA
CGTTTCGGTGTCATCCGACCACCATCATCAGTTTAAAAACATTGAAATGA
AAATTTCCGCTTCTGTGTTTGAAATTTTTATTCTCATTCAGGAGGATCAA
CCAATTTGATAAATTTATTGCATTCATTAAACAGTTACACAGTTGAAAGA
AATGTTCTTGAAATTCATAGACTGTTATAGATTTGATAATTTTGTGGGTT
TAGCTTTCAAAAAGTTGTGTGATAAAGTGCACGGATGTTTTATTTAGTAT
AAAAAATCTTACCAACCTACCGAAGACAAATTCGGAGTTAATGACATTCG
TTGACACCTTTGACGATAATTTCGAACAATTAATTACTTGGCTTTTTGCT
CCTCAATGAAGTCTTGAATATGAAAGAATATTTCAAGAGCATGAAATTTT
GGTTTCTAAATGTTTTTTTTATAAGAAACAAACGACTAATTTAAATAGAT
CGTCACTATTTGTGTTCTGAATGATTGTTTAATGGTCACGTCACGTAGAT
ATGAATTATAAATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTAT
CACTTGTTGAGATTGAAATTTTCGATGAAGCGTTTTGCTTCTTTTAATAA
TGTATCTACTTTTCGTTCTTTTTTTCTGTAGGAGCATTGCACCGATGTGG
AAGTTGAAACTACAAAGATCATAAGCAACGAAGAAGCTATATTACCCTTC
GAAAACGATTACTTTGATCTTGCTGTCAGCAGTTTAAGGTGACCTATTGA
CGTACTGTTTAATGATTTCTGTTGGCGAAGTATCACCTTAATGATTTTCC
TCACCGCACAACAGTACACATTATCTTAGCTTAACCTCGTTCTTTCTTCA
GATTTATGTTCTATATTCAAGAGTATCTCAAAATATACTTATCTTATCGA
CTTGAAATAGACTCCAAGTCTACTTGAAATCTAAGTCTATTTTTTCCAAA
ACCGGCTTATTTTTATACATACAGCCAACTCTCTCTAAATCGAACCTTTA
TCATTCGAATTTTTCTTTGATTCGAACTTAACATCCGTTCCCTTCAGCTG
GAAAATCGTATAGAATAACCCCTGTAATCCGAATCTTTCTATAATTCGAA
GAAAGATGTTGGTCCCTTAAAGATCGATTTAGAGAGTCAACTGTCTTATT
TGCATATATTTTGCCTTCAGTATGCATTGGATAAATGATTTACCAGGCAT
CCTATCAGAAGTGACTCGTTGTTTGAAAGATGATGGAGTGTTCATTGGTG
CCATCTTTGGTACGGACACTTTATATGAGTTGAGATGTTCACTGCAATTG
GCTGAGCTTGAACGTGAAGGGGTAAGTAGCAAAAAGAAAGTTTTGAGTAT
TAACTTTAATTCATGTAATACGACCTATTGATTGATCTATTCCCTTTCGT
GGTTGTACCTTAACAAGTAAAATAACATTTGCCAACGATTCGCCCATGTC
ATGTGAGCGGTTAATGGGGAGTTAGCTCATGGTGCTGATCCTAAGAGGCT
ATTTGATAACATACTGGTAGGGTATGAGAATTAATAACCACCTGCGACTC
AACCACAAAATAAAACTGAGAAAAATTTGGAATGTTCTAAAAGCGTACTA
TATAGTTTCCAAACTAAAAAGATTGATTTTATTTCAGGGTTTCGGTCCAC
ACATTTCACCGTTTACAGAAATGCGAGACATTGGAACTTTACTTCAACGT
GCTGGCATGAATCTCACCACCATTGTAAGTCAAATTATTCGGTTCTACCT
ATTACAGCAGTAGTGAGTTTGCGTATTTATAATAAATCGAAGGAGACGGT
ATAAAGAAGTTAGTTAAAGAAGTTGATGACATGTCGCCAAAATCACCGTC
CAATTCGCTTGACGACGGTAAAAACACCAAAATACCGTCGTCTGTTTAGG
TGAGCAAAGGCGATATAGAGCCGTACATCAACTTTCAACTTTGTTTTGCG
TCAACAATTTACCGTCGCCCTCGATTTTCTTCAATACATAAACTGGCAAG
TATGTTTTGTTGAGTTTGTCCTCATATATATGAGCATATGATTGAGCGGT
CATATCACTGACTCACAAAATTGCCTCCTTGCCTCTCTGATTGATGCCCT
CCAACTAAAGAGAGCGGCCAATGGTAGGTGGAAATATCCAGGGAAGGGTG
TGAGTAGTTAGCCTATCAAATACCAAGTCTGTAAGTGACACGCCTAAAAC
ATACAGAAACACAAATTGATTTTACGAACAAGATTTCTTTCATTTTTTCA
GGACTTTGACGAGATTACGATTGACTATCCCTCAATATTTGAGCTGATGG
AGGACCTTAAAGGTGGAGTGACTTTAAACATTTTATTCTTAAGCCTGGTG
TTTTTATTAGACATTTATCAGACAGTTTATAGTTTCCACCATCTAAACTT
ATAGACGCGAATCTTCTTTGCGATGTTACAAGAATTTGAATGTCTTGCTA
CCTGCTGTGTGGCCGAAAATCAACTTTCCAATTTGAGAAGTCTAAAGGTC
AACACTTTTTCTGGAAAGCAAGCTTTATGCCATAGTGGGCGAAATTTGAT
CTCCTTAACTGCTAACTTGATTTCTCAATTGATTTCTTAGGAATGGGTGA
AAATAATGCCACCTGGCAACGGAAAAGTATTCTACATCGTGACACACTTT
TTGCTGCGTCAGCAATTTACCAAGGTACTTTACAAGGCTTTACTCTTTGA
TTCCAGCAGGAAGGACATTGATAGACAGTCTCGACTTATAAAGTAAAGAA
AAAAGTGATACAATTATACTGAAAAAAACTGATTTCTGAATAATGGAAAT
TCTGGTTTAAAACAATATATCTTTATTCCCCTATATGTTTATTAAAATGT
TTTAAGAAGAATCACCACAAATTTGACTGAATTCTTTCATCTCTTTCATC
TCTCATTCTTTTCTTGTTTAAGCAATGTACGGTAACGAAGATGGTAGCAT
ACCCGCAACTTATCAAATCCTCTATATGATCGGGTGGAAACCCTCTGAAA
CCCAGGTAACAAGATTTAATACTTTTCCCTGAAAGTTATTTTGATCAAGT
TCACCTACCCCATAATTTCTAAAAAACCTAATACCTAAAACCTATCAAAG
TTGATGCAACGCTCTTCTTCACACTTTTACGTCGGGGTAAGGTTCATCGA
GTAAAAATCCGTCGGGCTAATGTCTGTCGGATAATTTACTGTGTACAAAT
GAGGAATTTCCGTTTTAGGTAATTTCCGGTCAAGGGTCGAGGGTCGAGGG
AACTTGCATCGAGTATAAATCCGTTAAGGAAAGGTCCGGAAATCAAACTA
CGGATTCTCACAGGTTCTCACGGCGAAATTCCTCCGACTCCTTAGCATAG
TAAAGTCTGTGCGAACTAATTCTGCAATCATCTGTATCAGCATTGTACAA
ATGACAGCTCTATTCAAATCTTCTCTGTTCATCTTCTAGTCCAAACCATT
AGAACGAGGTAGCGCAACAATGAATTTTAAAGACCTCACTAACGTTGTGG
AACTTGAGAAAAATGACAAATAG Coding sequence (CDS) from alignment at sc0000098_pilon:249294..254716- >XLOC_012239 ID=XLOC_012239|Name=XLOC_012239|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2010bp|location=Sequence derived from alignment at sc0000098_pilon:249294..254716- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGATTACAACATGTTGCAGATGTTCACACCTACAACAATTTATCCG
AAGAATCAAGTACCAAACAAGACATCTGACCACAACAACACAAGTTTGCA
ATATGAATATTTTTGATCAACAAACCAAGATTCACCAAAAGAATATGGCA
GCACAGCTACCTGATCATCAAGTTTATGATTATCTACGAGATGAGATGCT
GATTACAACATGTTGCAGATGTTCACACCTACAACAATTTATCCGAAGAA
TCAAGTACCAAACAAGACATCTGACCACAACAACACAAGTTTGCAATATG
AATATTTTTGATCAACAAACCAAGATTCACCAAAAGAATATGGCAGCACA
GCTACCTGATCATCAAGTTTATGATTATCTACGAGATGAGGTTGCTGAAA
GAGTAGCTGATCGATTGGCAGACATAACAAGGTTGCTGAAAGAGTAGCTG
ATCGATTGGCAGACATAACAAGATTCTTCCCAAAAGCACTTGACATCGGA
GCCGGTAAAGGATATTTAGCGAAACAAGTCCACAAAGATGAAGTTGGACA
TCTCTATCTCCTGGAAAACTCTGAGAAAATGCTGATTCTTCCCAAAAGCA
CTTGACATCGGAGCCGGTAAAGGATATTTAGCGAAACAAGTCCACAAAGA
TGAAGTTGGACATCTCTATCTCCTGGAAAACTCTGAGAAAATGCTGGAGC
ATTGCACCGATGTGGAAGTTGAAACTACAAAGATCATAAGCAACGAAGAA
GCTATATTACCCTTCGAAAACGATTACTTTGATCTTGCTGTCAGCAGTTT
AAGGAGCATTGCACCGATGTGGAAGTTGAAACTACAAAGATCATAAGCAA
CGAAGAAGCTATATTACCCTTCGAAAACGATTACTTTGATCTTGCTGTCA
GCAGTTTAAGTATGCATTGGATAAATGATTTACCAGGCATCCTATCAGAA
GTGACTCGTTGTTTGAAAGATGATGGAGTGTTCATTGGTGCCATCTTTGG
TACGGACACTTTATATGAGTTGAGATGTTCACTGCAATTGGCTGAGCTTG
AACGTGAAGGGTATGCATTGGATAAATGATTTACCAGGCATCCTATCAGA
AGTGACTCGTTGTTTGAAAGATGATGGAGTGTTCATTGGTGCCATCTTTG
GTACGGACACTTTATATGAGTTGAGATGTTCACTGCAATTGGCTGAGCTT
GAACGTGAAGGGGGTTTCGGTCCACACATTTCACCGTTTACAGAAATGCG
AGACATTGGAACTTTACTTCAACGTGCTGGCATGAATCTCACCACCATTG
GTTTCGGTCCACACATTTCACCGTTTACAGAAATGCGAGACATTGGAACT
TTACTTCAACGTGCTGGCATGAATCTCACCACCATTGACTTTGACGAGAT
TACGATTGACTATCCCTCAATATTTGAGCTGATGGAGGACCTTAAAGGAC
TTTGACGAGATTACGATTGACTATCCCTCAATATTTGAGCTGATGGAGGA
CCTTAAAGGAATGGGTGAAAATAATGCCACCTGGCAACGGAAAAGTATTC
TACATCGTGACACACTTTTTGCTGCGTCAGCAATTTACCAAGGAATGGGT
GAAAATAATGCCACCTGGCAACGGAAAAGTATTCTACATCGTGACACACT
TTTTGCTGCGTCAGCAATTTACCAAGCAATGTACGGTAACGAAGATGGTA
GCATACCCGCAACTTATCAAATCCTCTATATGATCGGGTGGAAACCCTCT
GAAACCCAGCAATGTACGGTAACGAAGATGGTAGCATACCCGCAACTTAT
CAAATCCTCTATATGATCGGGTGGAAACCCTCTGAAACCCAGTCCAAACC
ATTAGAACGAGGTAGCGCAACAATGAATTTTAAAGACCTCACTAACGTTG
TGGAACTTGAGAAAAATGACAAATAGTCCAAACCATTAGAACGAGGTAGC
GCAACAATGAATTTTAAAGACCTCACTAACGTTGTGGAACTTGAGAAAAA
TGACAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:249294..254716 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 922-1005:85 |
| Aaloc | 841-921:600 |
| Aaloc | 757-837:932 |
| Aaloc | 694-753:1273 |
| Aaloc | 607-693:1887 |
| Aaloc | 457-606:2353 |
| Aaloc | 349-453:2893 |
| Aaloc | 238-348:4656 |
| Aaloc | 196-234:4944 |
| Aaloc | 1-195:5424 |
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