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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:984889..987966+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012213 ID=XLOC_012213|Name=XLOC_012213|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3078bp|location=Sequence derived from alignment at sc0000058_pilon:984889..987966+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAGCAAAAGATCAAACAAAGTGCAATCATTATGTAAACATCATCT
AGATTTCAAACCCAACCCGTCACCAACATCTTCCACAGAGAAGTCTGGTC
TGTTGAGAGTACACGTCATGAAGGCTTCCGTTCACTCCCAGCATCAAAAA
CTTATGAACAATTTGAAGAAATCTTGTCGTGAAAGCGAAAATTTCGGTCC
CAATTCTTTGGTCAAACAATTACAGTCACTTGGCAAAATGTTTGCTCCTC
CCAAAAATTCTGATCTTTCTCAGATAAATGGTATGTTTATTCATTCGTAT
TTAGTTCTGTGTCTGTACTTGTAGTGAAATCCTTAAAATCAACTCCACTC
TACACCATTTGAAGAAAGGATGTAAGTAAAGTAAATGGTATCATTCAGAC
AAATCACtttttttCAGAAACACCAGCACCGCAGCCAGCTATGAAAAGAG
ACCAACCGTCAGAGAGAGAATTGATCGAATCTTTAAATTATGTTTTACCC
ATCGAAAAGTTCaatcatttcaaaatattgctaccCAAGTCGAAGCTTCA
CGTCACAACGCCTGACGGTGAGGAAGTGATCGTGGAGCCGTGTGACAAAC
ACACCAAAGTCAAAGCGACGCACGAAACACACGAAGGCCTTATGAAGCGC
CACAAAACGACCAAAGATGTCCTCCAACTTTTTTCTAAACAGAAATCGCG
TCAATTGAACGCAAACAACTGGCGAAAAGACGATTCATTCTTCATTTATG
TGTTCGAGAACAAAAAGTTCTTATTCGATAAATCAACCGGTGAAATCTCG
TGTTTTCCAACGCCTGACGCAATGAAGCCAAAACCATCGAACAAAAGCAA
AGGGGAGCCACCTCAGCTTGAACGAAATATTGTGGGCAAATCGTTTGGAA
CATTTATAAATGACTTTTGCAAGAAGCCTGTGGAAGGGAAAGAATACCCT
TCAACCAATCAATTTAACGTTCGAAGCAATCACAATATACAATTGCACGT
GCTGCAACCTGTAGAACAGAAAGCAAACTTCCGATTCGTCATTCATTCTT
CTCCTTTTGGTTCGTTCATTGAGAGAGCCGGTACTTCTCATATCGCAAGT
AtgttatctttttgttttgaacatcgAATATCCTGACGTGGATTAATAAT
TTTTATACTCTACTATATTGTACAATCATTGACAAAACCTATGGTACAAA
GCCCACAAATGAGTTCCCTATCCCCTcccccccccTAAACAATGTTGTTG
GAGGGGGAGGTTATTGCCCTGTGTCTAAATTTGACCGCCCAGAAATGTGC
CATGATATATTAGCAACGATTGTAGTTTGTAAGATAGGAaatgaaatatt
attaaaaGGCAATCACCACATGGGGAACCCGATATCAGTACAAGCTAAtc
acttttttctttcagcAGGAAATCGAAAACAAACAGCCAGGAAGAATAAC
AGGTGCTATACATAATTCTTTCTGTGTTACCCAAATTCTCGAAAGAATCT
ATTATTGTGTGAAGTTGACTCTAAATCGTCTTTTCGAACATGGAAATTCA
GACAGCCCAGTAATGAGAactgttttcttcttctttccacAGAGATTACA
AGGATCGTGAAGAAGAAAAGTTAATCGAGCTGATAGAGCAAATACCTAAT
CAGTATCTACCAGACAAAAAACAGCGTAATAAGGTTCAGATTGAAGCAAG
CTTGTTTAACAATTTATTTCAGTTTTTGTCTAAAAACTCAACTAGTGTTG
TATCAGTTCATTTATCAGTTACTTAGTCAGCTCAGAAAATTTTCATATGA
CCCTGATGCATGTCCTAaacaatttcatgtttttttttttcagtattcTA
TTGTTCGTGGTTCGATTGATTACATAAAGGATCTGGAACGAAAAGTTCGA
GGTTAGTAACTTATTTAGAGGAGTGACATGGTATTTTTCAGTCgtgttga
tttaaaaaaaagtcatattCCGTAAggttttccttcgaaaatacaaagga
tggttttccttcgaaaatacaCATCAaggttttccttcaaaaatacaaag
gatggttttccttcgaaaatacatATCAaggttttccttcaaaaatacaa
agaaaggttttttttcgaaaatacaaaggatggttttccttcaaaaatac
aaagcaaggttttccttcgaaaatacaaAGCAaggttttccttcaaaaat
acaatgaaaggtttttttcgaaaatagaaATCAAggttttccttcgaaaa
tacaaAGCAAggttttccttcgaaaatacaaAGCAGCGTTTTCCTTCGAA
GATTACTGaacgaaaaacgaaaaagtGAAATGATTATCCTCCTTAGAACA
ACTTGGTATTCCACAAGCATCAGAGGACCCTTTGGATGTCATAGAAATAG
CTCAACCAACGGATCACTCCCAACACCCGATGGAACTTTCTGCTTCACAA
GAAGACCACGAAGAGTGAGCTCAAATTCCTTTTCTTAACGTTATACATAC
TTTTAATagtgatttgttttattttcaaaattatcagtgttttcattttg
aaagtaacttttcAATCGTTTTGAACTTTCTCTGATTATATTTGTTGTGA
TAGTTTCTGCCCACATCTCATTTTCAGCATCACCGAGTACGAAGAGGAGG
AAGTGTATGATAACGCTTTCGAAGATTTCTTTCAACTCCTCTGCAATCCC
ATCTCCTCAACCAGAACAACAAACCATGGTGACAATGAGGGAAATCAAAC
GACCACCATTCAATTTCCCTCTAAAGAAGAATGCTCTCTCTTCCAGTCCC
TCTCTGCTATGGAACAGAATTTACTACGAGCAAGTCAAGAGGATGAACAG
TTGGATCGATTTGTAAGTATCGAAGAACGATTCCAATTGAACTATAGTGA
CGTCAATCTGAACAGTTTACAAGGAGAATATGTtatcaatgatgaaaatg
aaagtgaggTTCAGGACGAAGTAATGTATTCTGCAGAACAACCCAACATC
ATGAATTCACCTATCTCCAAAGACACTGATCGTGTTTTCCAATCACCAAT
CGCTCGAAATAATGAAATGCAATTATAA Coding sequence (CDS) from alignment at sc0000058_pilon:984889..987966+ >XLOC_012213 ID=XLOC_012213|Name=XLOC_012213|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3432bp|location=Sequence derived from alignment at sc0000058_pilon:984889..987966+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAGCAAAAGATCAAACAAAGTGCAATCATTATGTAAACATCATCT
AGATTTCAAACCCAACCCGTCACCAACATCTTCCACAGAGAAGTCTGGTC
TGTTGAGAGTACACGTCATGAAGGCTTCCGTTCACTCCCAGCATCAAAAA
CTTATGAACAATTTGAAGAAATCTTGTCGTGAAAGCGAAAATTTCGGTCC
CAATTCTTTGGTCAAACAATTACAGTCACTTGGCAAAATGTTTGCTCCTC
CCAAAAATTCTGATCTTTCTCAGATAAATGATGAGGAGCAAAAGATCAAA
CAAAGTGCAATCATTATGTAAACATCATCTAGATTTCAAACCCAACCCGT
CACCAACATCTTCCACAGAGAAGTCTGGTCTGTTGAGAGTACACGTCATG
AAGGCTTCCGTTCACTCCCAGCATCAAAAACTTATGAACAATTTGAAGAA
ATCTTGTCGTGAAAGCGAAAATTTCGGTCCCAATTCTTTGGTCAAACAAT
TACAGTCACTTGGCAAAATGTTTGCTCCTCCCAAAAATTCTGATCTTTCT
CAGATAAATGAAACACCAGCACCGCAGCCAGCTATGAAAAGAGACCAACC
GTCAGAGAGAGAATTGATCGAATCTTTAAATTATGTTTTACCCATCGAAA
AGTTCaatcatttcaaaatattgctaccCAAGTCGAAGCTTCACGTCACA
ACGCCTGACGGTGAGGAAGTGATCGTGGAGCCGTGTGACAAACACACCAA
AGTCAAAGCGACGCACGAAACACACGAAGGCCTTATGAAGCGCCACAAAA
CGACCAAAGATGTCCTCCAACTTTTTTCTAAACAGAAATCGCGTCAATTG
AACGCAAACAACTGGCGAAAAGACGATTCATTCTTCATTTATGTGTTCGA
GAACAAAAAGTTCTTATTCGATAAATCAACCGGTGAAATCTCGTGTTTTC
CAACGCCTGACGCAATGAAGCCAAAACCATCGAACAAAAGCAAAGGGGAG
CCACCTCAGCTTGAACGAAATATTGTGGGCAAATCGTTTGGAACATTTAT
AAATGACTTTTGCAAGAAGCCTGTGGAAGGGAAAGAATACCCTTCAACCA
ATCAATTTAACGTTCGAAGCAATCACAATATACAATTGCACGTGCTGCAA
CCTGTAGAACAGAAAGCAAACTTCCGATTCGTCATTCATTCTTCTCCTTT
TGGTTCGTTCATTGAGAGAGCCGGTACTTCTCATATCGCAAAAACACCAG
CACCGCAGCCAGCTATGAAAAGAGACCAACCGTCAGAGAGAGAATTGATC
GAATCTTTAAATTATGTTTTACCCATCGAAAAGTTCaatcatttcaaaat
attgctaccCAAGTCGAAGCTTCACGTCACAACGCCTGACGGTGAGGAAG
TGATCGTGGAGCCGTGTGACAAACACACCAAAGTCAAAGCGACGCACGAA
ACACACGAAGGCCTTATGAAGCGCCACAAAACGACCAAAGATGTCCTCCA
ACTTTTTTCTAAACAGAAATCGCGTCAATTGAACGCAAACAACTGGCGAA
AAGACGATTCATTCTTCATTTATGTGTTCGAGAACAAAAAGTTCTTATTC
GATAAATCAACCGGTGAAATCTCGTGTTTTCCAACGCCTGACGCAATGAA
GCCAAAACCATCGAACAAAAGCAAAGGGGAGCCACCTCAGCTTGAACGAA
ATATTGTGGGCAAATCGTTTGGAACATTTATAAATGACTTTTGCAAGAAG
CCTGTGGAAGGGAAAGAATACCCTTCAACCAATCAATTTAACGTTCGAAG
CAATCACAATATACAATTGCACGTGCTGCAACCTGTAGAACAGAAAGCAA
ACTTCCGATTCGTCATTCATTCTTCTCCTTTTGGTTCGTTCATTGAGAGA
GCCGGTACTTCTCATATCGCAAcAGGAAATCGAAAACAAACAGCCAGGAA
GAATAACAGcAGGAAATCGAAAACAAACAGCCAGGAAGAATAACAGAGAT
TACAAGGATCGTGAAGAAGAAAAGTTAATCGAGCTGATAGAGCAAATACC
TAATCAGTATCTACCAGACAAAAAACAGCGTAATAAGAGATTACAAGGAT
CGTGAAGAAGAAAAGTTAATCGAGCTGATAGAGCAAATACCTAATCAGTA
TCTACCAGACAAAAAACAGCGTAATAAGtattcTATTGTTCGTGGTTCGA
TTGATTACATAAAGGATCTGGAACGAAAAGTTCGAGtattcTATTGTTCG
TGGTTCGATTGATTACATAAAGGATCTGGAACGAAAAGTTCGAGAACAAC
TTGGTATTCCACAAGCATCAGAGGACCCTTTGGATGTCATAGAAATAGCT
CAACCAACGGATCACTCCCAACACCCGATGGAACTTTCTGCTTCACAAGA
AGACCACGAAGAAACAACTTGGTATTCCACAAGCATCAGAGGACCCTTTG
GATGTCATAGAAATAGCTCAACCAACGGATCACTCCCAACACCCGATGGA
ACTTTCTGCTTCACAAGAAGACCACGAAGACATCACCGAGTACGAAGAGG
AGGAAGTGTATGATAACGCTTTCGAAGATTTCTTTCAACTCCTCTGCAAT
CCCATCTCCTCAACCAGAACAACAAACCATGGTGACAATGAGGGAAATCA
AACGACCACCATTCAATTTCCCTCTAAAGAAGAATGCTCTCTCTTCCAGT
CCCTCTCTGCTATGGAACAGAATTTACTACGAGCAAGTCAAGAGGATGAA
CAGTTGGATCGATTTGTAAGTATCGAAGAACGATTCCAATTGAACTATAG
TGACGTCAATCTGAACAGTTTACAAGGAGAATATGTtatcaatgatgaaa
atgaaagtgaggTTCAGGACGAAGTAATGTATTCTGCAGAACAACCCAAC
ATCATGAATTCACCTATCTCCAAAGACACTGATCGTGTTTTCCAATCACC
AATCGCTCGAAATAATGAAATGCAATTATAACATCACCGAGTACGAAGAG
GAGGAAGTGTATGATAACGCTTTCGAAGATTTCTTTCAACTCCTCTGCAA
TCCCATCTCCTCAACCAGAACAACAAACCATGGTGACAATGAGGGAAATC
AAACGACCACCATTCAATTTCCCTCTAAAGAAGAATGCTCTCTCTTCCAG
TCCCTCTCTGCTATGGAACAGAATTTACTACGAGCAAGTCAAGAGGATGA
ACAGTTGGATCGATTTGTAAGTATCGAAGAACGATTCCAATTGAACTATA
GTGACGTCAATCTGAACAGTTTACAAGGAGAATATGTtatcaatgatgaa
aatgaaagtgaggTTCAGGACGAAGTAATGTATTCTGCAGAACAACCCAA
CATCATGAATTCACCTATCTCCAAAGACACTGATCGTGTTTTCCAATCAC
CAATCGCTCGAAATAATGAAATGCAATTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:984889..987966 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1273-1722:2629 |
| Aaloc | 1174-1269:2367 |
| Aaloc | 1150-1167:2349 |
| Aaloc | 1090-1146:1844 |
| Aaloc | 1000-1089:1594 |
| Aaloc | 964-996:1418 |
| Aaloc | 283-960:420 |
| Aaloc | 1-279:1 |
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