XLOC_012209 (mRNA) -

Overview
NameXLOC_012209
Unique NameXLOC_012209
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000058_pilon:912996..913837+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012209 ID=XLOC_012209|Name=XLOC_012209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=842bp|location=Sequence derived from alignment at sc0000058_pilon:912996..913837+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacGTCCTCAATCAAGCTCTTCGCAACTTTCTTCATCCTTGCTTCCAT TTACACGGACATTTCTTTGGCACAAGGTAAGTTCCTTGTTCGTGTCTCCT TCCTTATGTATCGTGGACAGTTagtgaaaagtttttgatttatCATCACG ATCATCAGGCGCTTTTCTTATgatcttttgttgttttgtcaCAGGACCAC GCAAGTACCATGGTTCGTCCACACCTTCCACCAAACAAATGAACGCTATT CGTGGTTTGAAATCCAGATGTCAAGTTTGTTTGACTATCAAAAAAGAGAT GAGTGGCAAAACCCCTGAAAATGACGACATTTGCGATGATAAACTGGTCC ATGACGCCGAATCGGTACGTTCCTCCCTTTGTTTAGATGTCCACTGAAAC TTGTAATTCTTTTCCAAGGGTACCTTGTGTCTAAAAGGgtaaaaaatact gaaaaatttttgatattctttgaatttactgtattttcttattttcagtg tGAAGTCATCTTGTACGCGGTTATCACTCGCAAGCGCTCTTTGGACTCAT ATTGCAACGTAAGTATCTCCTCTATGATCCAAATGTTTAGCCCAATGAAA AGAACCAACCCTTAGGGGtttttttCGCCTCGGCGTGGTttgcttttttt taattactgAGGCAATAAATACAAAGCAATTTCTCTAAACAAAAACTGAC CGCTGTTTCGGAAGAGGTACATTCATGGCAATGTCTTTATGATCTTTTGT TCTATTTTTCCCAGTTCATTTGCAACAAACAAAATCCATCGAAGAAAGTC ATCAAGAAACGTTCTTTAGACATGATGAAAGAAATCGAGTGA

Coding sequence (CDS) from alignment at sc0000058_pilon:912996..913837+

>XLOC_012209 ID=XLOC_012209|Name=XLOC_012209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=768bp|location=Sequence derived from alignment at sc0000058_pilon:912996..913837+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacGTCCTCAATCAAGCTCTTCGCAACTTTCTTCATCCTTGCTTCCAT
TTACACGGACATTTCTTTGGCACAAGatgacGTCCTCAATCAAGCTCTTC
GCAACTTTCTTCATCCTTGCTTCCATTTACACGGACATTTCTTTGGCACA
AGGACCACGCAAGTACCATGGTTCGTCCACACCTTCCACCAAACAAATGA
ACGCTATTCGTGGTTTGAAATCCAGATGTCAAGTTTGTTTGACTATCAAA
AAAGAGATGAGTGGCAAAACCCCTGAAAATGACGACATTTGCGATGATAA
ACTGGTCCATGACGCCGAATCGGACCACGCAAGTACCATGGTTCGTCCAC
ACCTTCCACCAAACAAATGAACGCTATTCGTGGTTTGAAATCCAGATGTC
AAGTTTGTTTGACTATCAAAAAAGAGATGAGTGGCAAAACCCCTGAAAAT
GACGACATTTGCGATGATAAACTGGTCCATGACGCCGAATCGtgtGAAGT
CATCTTGTACGCGGTTATCACTCGCAAGCGCTCTTTGGACTCATATTGCA
ACtgtGAAGTCATCTTGTACGCGGTTATCACTCGCAAGCGCTCTTTGGAC
TCATATTGCAACTTCATTTGCAACAAACAAAATCCATCGAAGAAAGTCAT
CAAGAAACGTTCTTTAGACATGATGAAAGAAATCGAGTGATTCATTTGCA
ACAAACAAAATCCATCGAAGAAAGTCATCAAGAAACGTTCTTTAGACATG
ATGAAAGAAATCGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_012209XLOC_012209-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000058_pilongenomesc0000058_pilon:912996..913837 +
Properties
Property NameValue
Aaloc307-384:765
Aaloc247-306:499
Aaloc79-246:197
Aaloc1-75:1