|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:918179..921012+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012208 ID=XLOC_012208|Name=XLOC_012208|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2834bp|location=Sequence derived from alignment at sc0000058_pilon:918179..921012+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGCGATTATTTGGCATCACGTTTCTGTTCCTTGCATTTCACCAAGG
TAAGCCCTCCTTCTCAAAATCCTTCGTCGAAAATTTCTGCAAATTATTTC
TTGTAGCTTCGTGTATGTACTAAGAGTACAGGCTATTAAATCTTCATCGA
CCTATCTTTCAGTTTCGTCAGAATACAGTTGGCCTGCAGGAACATACGGA
TTACCGGAAACGGCCACTGGATGTCCGTACATCGGGAAAGCCAGTTCGTG
GAAAAGAGGCTTCACTTATCACAATACAGAAGATGAGTTTCCTGCAAACA
AACGATCGCAGAGCTACCATTTTGCTGCCAACTTCTCACAACATGGCATT
CAACAACGATTTTGTATCAAAGATCAACCGAGCTCGAACGAAAATGGAGG
TAAATGGCCCGATGGAAAATATTGCATCTATAAAAAAGGTTAGTCGCTTG
AGATGGGTAAAATCTGCCTTGTTAGTTTACAGGTTGAATAAAAACAGTCA
GTGTTTAAGGTTTGTTTCTGCATGTCTGCAAATGGCTGTAACAAGAGAAG
TGTCTCCTTGCACGGTTCAATGTCTCCAACTTGCTTAAAAATAGATTGCC
TGTCGTTGCGAAACTACATCCAACATAAACAAGTCACTTCATTTTTCCAA
GTACGTTGTAAAAATGACATACTATCACTGCTCATTCAATTCCAACAGGT
CTGTTCGTGTCACATTGTTGGGGTCATTTTGCAAACGGCTCCTATAACGT
GCATCGCAAAAAGCTTTAAACCAACAGTATCAAAATcacaatcaaatcaa
ttaactGTTTCCGAAATTACGATCGCTAACCCTGTAGATAACGTCTCACA
TATCCGGAAATCGAGCCCGGGCCTGTTGCTTAGCGGTAAAGATCACAgtc
aggctcggatacagagggaggctataaccaatggaggagagcgcacttta
ttatcgtattaccttatatggaaactaattactctccatgaataagatag
cctacctcctgtatccgacacTGACAGTTCTCTAAAGATTCCCATATAAA
ATTTGTGACTAGCAACGAACACTCTAGGTCTgcgaggtctgcgattcaga
ctacgaACACTCATCCACAATACGATAATAAACACAATACACCTTCTTAA
TTTCTCCACTGATTTCTGCTTTCACTGGCAATTCTTTGATGAAAGCTTTC
GGATATTCGGAAGAAGtttaattttcatatttctcaTTCAAATTTATGGg
aatttattttccttttaatcaggtttcttaaaattatttttcaagatcct
ttccaacttttttaAAGCACTTCAAGAGACAAATTAAACTTGGCTTAGTG
GTaaaaaaaCTTACACCAAAGGCATCAGGTAAAATTAGCTAAAACTCAAG
GGGCATACTTCTAATACTAACAAAATTTTATACTCTTCAATGGATTTCTA
TAATCGATCTAGACTGGCATgtcagtcgggctggaacgatatccgcggga
aaagtgagcgtatgagttaggtaagcgtaggaaagaaactttgtcggcgg
caagggctgaaagctgttaatcagcagcctctcaccaacttttgctcgtt
ctccacGCAGCTCGTATTCTAGCAAAcacccgccgcctttatgttcccgc
cctctgacatgataaattaacagactagtttgctagtctataaACGATAA
TGTCAAAATAATCgggggtgtctacgggaccttcaaaattttgggaatgG
AGAGAGAAAGAAATTGCGTAAACATCCTGATAGATGTAAACATTTTCGTT
TATAGGAGATTCTTGTCCAGAAGGTTTAGAGGAAGGTTTTATTCGTTGGG
ATGACGAGCATCGCAAACTTGATCGAACCAATCAACGCTCAGGTGTTCTC
CCTGCTGGCGAATACCTGCCCACAAAAACGGTCATCAATTACTGCTGTCA
AAGACACGGTGACGTCATGAAAGCCATCAACCTGCCCAATATGAAACCTT
TCTATCTATTGGCTCATGGAGGACCACAATGTCAACATGTCGCAGGGACA
AGGGTATGTAAAGTAATTTCAGCATAGACCTTCCCATGTTTTGCAAAGAA
GTAGTATCCGATTTGATGGTGAAAGAATCTTCGCCCACTCTGCACTATAG
TCGATAATGCAGTCAGCGAACCAGACTGAGTaataaaaaactgaattttc
ttCCAGGCATCATTGGAGTTCATCAAATTTGACGACAATGATCGGGGAAG
TCAAAGTGGGTTCGGTGGGGCTCATCCCTATGGTCCCGAAGAAGACCTCT
TCAACACCAAAGtgtattattgttattatgAACCCGGTGAAGAATCCACT
GAAGATCTCGGTCTCGGCAAAAAAGTGATCACTAAGGTATGTTTGAGTCG
AATTTGAGACTATCTAGAATATCTAGGTTGTCGGATTTACACTTTGGAAA
GGATCATAACTAGAAATGAAGCGACATTTCAATGACAGTTAAATTACTCG
ACCCTGGAAAAATAGCTTTATAAAAAACTCAAAGAAAACCGGGGAAAATT
CATTGTTTCAAATGTATAATAAATCGGTTTTGTTACGATTTACACAATCA
GTCCGAGGGTCATGCTTTAGCATCATTAATCTCGATTTCTTTCTTTACTT
TCTTCAGGAGAAGCCACACTCAAGAACAGGACTCGCACTAGCAATTGGTT
GTGGCGTTTTAGGGGTGGTGCTTGGAACCGCCTCCATCGTTTTCGCCGCC
CAAAGAATCATGGCGAGAAGAGCGGAAGCCTTAGAAACAGCCAACGAGGA
GTATCCTGATATCCCGAAACCTGATCTCCCTTGA Coding sequence (CDS) from alignment at sc0000058_pilon:918179..921012+ >XLOC_012208 ID=XLOC_012208|Name=XLOC_012208|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1860bp|location=Sequence derived from alignment at sc0000058_pilon:918179..921012+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGCGATTATTTGGCATCACGTTTCTGTTCCTTGCATTTCACCAAGA
TGAGGCGATTATTTGGCATCACGTTTCTGTTCCTTGCATTTCACCAAGTT
TCGTCAGAATACAGTTGGCCTGCAGGAACATACGGATTACCGGAAACGGC
CACTGGATGTCCGTACATCGGGAAAGCCAGTTCGTGGAAAAGAGGCTTCA
CTTATCACAATACAGAAGATGAGTTTCCTGCAAACAAACGATCGCAGAGC
TACCATTTTGCTGCCAACTTCTCACAACATGGCATTCAACAACGATTTTG
TATCAAAGATCAACCGAGCTCGAACGAAAATGGAGGTAAATGGCCCGATG
GAAAATATTGCATCTATAAAAAAGTTTCGTCAGAATACAGTTGGCCTGCA
GGAACATACGGATTACCGGAAACGGCCACTGGATGTCCGTACATCGGGAA
AGCCAGTTCGTGGAAAAGAGGCTTCACTTATCACAATACAGAAGATGAGT
TTCCTGCAAACAAACGATCGCAGAGCTACCATTTTGCTGCCAACTTCTCA
CAACATGGCATTCAACAACGATTTTGTATCAAAGATCAACCGAGCTCGAA
CGAAAATGGAGGTAAATGGCCCGATGGAAAATATTGCATCTATAAAAAAG
GAGATTCTTGTCCAGAAGGTTTAGAGGAAGGTTTTATTCGTTGGGATGAC
GAGCATCGCAAACTTGATCGAACCAATCAACGCTCAGGTGTTCTCCCTGC
TGGCGAATACCTGCCCACAAAAACGGTCATCAATTACTGCTGTCAAAGAC
ACGGTGACGTCATGAAAGCCATCAACCTGCCCAATATGAAACCTTTCTAT
CTATTGGCTCATGGAGGACCACAATGTCAACATGTCGCAGGGACAAGGGA
GATTCTTGTCCAGAAGGTTTAGAGGAAGGTTTTATTCGTTGGGATGACGA
GCATCGCAAACTTGATCGAACCAATCAACGCTCAGGTGTTCTCCCTGCTG
GCGAATACCTGCCCACAAAAACGGTCATCAATTACTGCTGTCAAAGACAC
GGTGACGTCATGAAAGCCATCAACCTGCCCAATATGAAACCTTTCTATCT
ATTGGCTCATGGAGGACCACAATGTCAACATGTCGCAGGGACAAGGGCAT
CATTGGAGTTCATCAAATTTGACGACAATGATCGGGGAAGTCAAAGTGGG
TTCGGTGGGGCTCATCCCTATGGTCCCGAAGAAGACCTCTTCAACACCAA
AGtgtattattgttattatgAACCCGGTGAAGAATCCACTGAAGATCTCG
GTCTCGGCAAAAAAGTGATCACTAAGGCATCATTGGAGTTCATCAAATTT
GACGACAATGATCGGGGAAGTCAAAGTGGGTTCGGTGGGGCTCATCCCTA
TGGTCCCGAAGAAGACCTCTTCAACACCAAAGtgtattattgttattatg
AACCCGGTGAAGAATCCACTGAAGATCTCGGTCTCGGCAAAAAAGTGATC
ACTAAGGAGAAGCCACACTCAAGAACAGGACTCGCACTAGCAATTGGTTG
TGGCGTTTTAGGGGTGGTGCTTGGAACCGCCTCCATCGTTTTCGCCGCCC
AAAGAATCATGGCGAGAAGAGCGGAAGCCTTAGAAACAGCCAACGAGGAG
TATCCTGATATCCCGAAACCTGATCTCCCTTGAGAGAAGCCACACTCAAG
AACAGGACTCGCACTAGCAATTGGTTGTGGCGTTTTAGGGGTGGTGCTTG
GAACCGCCTCCATCGTTTTCGCCGCCCAAAGAATCATGGCGAGAAGAGCG
GAAGCCTTAGAAACAGCCAACGAGGAGTATCCTGATATCCCGAAACCTGA
TCTCCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:918179..921012 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 754-930:2658 |
| Aaloc | 574-753:2207 |
| Aaloc | 328-573:1808 |
| Aaloc | 52-324:165 |
| Aaloc | 1-48:1 |
|
