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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:461473..467000+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012194 ID=XLOC_012194|Name=XLOC_012194|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5528bp|location=Sequence derived from alignment at sc0000182_pilon:461473..467000+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTAAGCCGTTACCTGACTGCAATATGTATCCTTTCAATCACAAC
ACTAGGCTATATCTATTTCGTGCACTACAACGAAACATCCACTCAtttga
aatatatcaaatataGTCTGTTTAATAAATTATGTATTGATCAAGGCCTT
CAGACGGCCTGGTGTCGTCAGGAAGAGGTCCTTGCAGATAAGATTGAGAG
CAACGATAATAAACTTTTAGACAAAATAGTgcgaaagaaattgaaagaaa
aacttAAGAAGGAGATTAACCAGTACAAACTTAATAAACAAGTCAAactc
aacaacaaaagaaataaacaaGAACAAGATACATCGTTGAAGCGCATAGA
CCATGAAATCAAGAGTACAGCTAGACCAACAAAGACTACTAAAACACCAT
CTTCAACCTGGATTCCAACAACAGGCTACCGGCGCAAGCCACAGAAATGC
AATATACCCATAGTGGATCCTTTTCACCGCGAAGTTCGACCATACATTAC
TTACAAATGGACGCAAAAATGTACTCTAGCCTGGGAGAAATCTCGAGTGG
AAAAAGGGTTCTTGTACGTAGACCTTGCAGATGTGTCGGCGGTAAATATG
AGTTACATAAAACGTATAAGTGATGAGGATAATGAATTGGACACACGGAA
TATTTATCATGAGTCGACCTCGACAAGGTCTAAGAAAGGTAAGGCAAAAG
GCTTAAAGAAATAATcaaatggtttgagatattGGTATTTGGATCCTTCT
ATTGTCTCaggcaaaatctcaaaatatttttgcctcaCTATTTTTCCAAA
GTCCAGATATTTATgttacaagtttttggcttttaaggatgaaaaaaata
gaatttcaacgtaagaaacCCTGTAagaaaccattttcaaaaatttcaat
ttttgatatctcgattttggaaaattgttacacaTCAAAAATACTTGGAG
GTTTTACTAAGGACCACAGAAGGTTTCTGTAATCTTGATATCTcgaacca
tctgattatccctttaaataaAACACTACCTGGAGCATCTCCGTCCCTAA
CTGAAGAAAAATTACGCGCCATCTTTTAAAGAGTTACGTCACAGTTTTTC
TTGCGCTAGTCTTGAAATTtggaagtcattgcagtgtcaaaaaaaTCAAG
GTTTCTACTGTGACCTTTCTAAGATGTCTCCGTGGCATTAGGAAAGGAAG
AGCTCTATCTAGGCTGCAaccatcccctctgatatgatttgatatagggg
atgcgtatcgtttaaaatatttgtcccaacttacccccgtcttttctttt
ttcttttttgattatgcgtcatagcaatacaatgacttctttttttcttt
gatcaatgaatgaaaattgataattatgaaaacaacagcacaatttttta
tcattctttgattggatgtgacgaaattatgtaaatttatgcaaattttg
gttaccccaatttgaggtaactctcggacgagaatttcaaACACGATACG
CATCtcctataacaaaataaattctggggatgctCGCAGCCtaagctcta
tctagtgtttatATATGATATGATGAGTACACTCCGTGCAGATGGAATCT
TTTTACACATCTATACTTAAATTaacctagactagtaaactagtcggtta
ttacttataataaaactgtcaatcaaataatgtaaacactaattatattc
agcgcgcgtgagagaaaaggaaaataaccgactagaagcttcttccaaca
cctttttttcttcacctaaaatcgtaaggagagacatacagatttctgta
tgtctgacccgtgcgggattgcatttatttttctttctgtttattgcatt
ttcggaaatgctcatttatttatacgttcccatgtttaatgttactatga
aatatcatttagtcaaaaaagttggatggattctcaaaaacctaaaaaag
gttgtaaaattaaacaatgtttttgagggaagaagcttctagtcgttgaa
attcagaaaagacacgcaacctcacctcttcgattctttttatttggagc
ttaaattttttgtatatgggtctgttttctgAAATTAACCTTTCATCAAT
TCCCTTTGATCTTGATCTAAAAGCGACGGTATGTGTGGACAAAAATTGGC
TCTTAAAATTTGACCGTCATGACCGAACATGGTCGGATTAActgtttttt
gaactttttgactGGCTTCCTTATTTGACTGACGGCCTAAAAGGTGAATT
GGATTTCCGGATCAATATCTCGATAGTCgagtacatatttttttataagc
aagtgtctatccctatatcaggctcacattatgcttagcattcaattgtt
ctcaaacaatagagccattgtttaggtacccaaaactgagcctgcatatg
cttataaacgttatgcttataaaagaaaaaacatgtaatacagTAACACA
TTTGTTTGATTCGCAAAGTATTTTACACTTGATCtttttttCAGTATAAC
GATTGTCAACTTATattcttttcacttttcaagATAAATTGGCCATCAAA
CTAGAAGATGATTTCATTCGAGTTGacatcaaaaccaaaacaaaagagaa
acctTTCTCCGAATATCTCATGTATCCTGTCAAAAAGCCACCCCAAAAGG
GCGAGCCGCCCTTCAAGAACTATGACGCCCAAAAAGACAAATACAACGTA
TTGATGGTGATGACAGATTCGGTTTCTCACGCATGCGCACAAAGATATCT
GACTAAAACGTACAAATATTTGCAAGAAAATCCACACACTGTCATTATGA
AGGtaatgatttttctgaaaaatatgttCTACCTACACAATGAATCTTAC
AAGATTGGTCAAATTGCCAAATTGATTCCCCGCCaaaaaaaGTTATCTTG
GCTAATCGCTAAATCAAGGCAACGCCACGAGGCAACGTCAAAATTTACCA
ACTTAAAGATGTACGACTATTGATTGTGAAGCTTGAGTCTTGATCGCCTC
CAGATAGAGGTTGCGATAAAATTCTTAAGGGAAAGGAAATGGGATTTTCA
AAGTCTTCAAAAGAAAGTAGGGTCTTCGTAAAGGATTGAGAGAGCTACCC
ATCCTGACCCACCAGCCATGTTGAGTTAAGGATCTTTCAACGAGTTAAAT
ATATCATTATTAATCTTTATAGGGACATACTATTCTTGGTGACGCCACCA
CGCCACAAATCTCCGCCATGTTCTTTGGCGGCAAACCAGAACATTTAACG
CCAGAAGGACGAAAAGGAGAAAGGGGTAAGAACATAGCAGTATGGAGCCt
ttccagatgagatggagtttttataatatactttaataattggtcatttg
aagtaataaaaatgctttgctctgaaggtcgggcatattATAACATCTGA
AAGGTTATTACGGGATAGgcattacgggatttgacttgACCGCGTTCAAA
GATTTTGCTCGGAGCTTGGAAACGATCAACAGCAAGCTATCATCTGATTC
CAAATCGGATACAGGTGCTACccagaaaaaataacaaattatgAGTTGTT
ATATTTTCTGGCTAGCACCATATTCGTATATGGTTCGGAATCATGTGCTA
GCTTGCTTATatgtaaacaaacataaacaatccctaatttagcttcattt
acatgaaaatacaacttaaaacaTAAATTTCTTGCTTATTCCTACTTACC
CAGACATACTCGGTAAATATTACACTAACCTTCATAGTTTTCAGGAcctc
aaaagtgaattttcaatgtgctctgtaaaattacaaaattgggcTTGTTC
TGTTGGCACACAAAAAGTGAAGTTAATCGTTAATAAGATACAAACTACCT
ATACAGAAGTCTGTAAACAAGTCTATAGATCTATCTGAAGACAAAATTGT
CTGTTTTGTACACATGTTTGTACTGCTGCTAGAGACTTTGACTGACTTTG
ACTGTTGTCGGTCAGTCGGTTGTGTTCAGTTGTCTGGCGGTCAACAGTCG
TTTCGGTAGAACCGCACAAGATTATACCAACATAAAAGTTACTTAAAAAG
CATAAGGATCATACCTGTTACTGTTTCTTTATGATCTTTGAGTCTGGCTT
TGAGAAAATTCAGTAAAAATCAATGTAACAAAAGTTCTTCACTACTTGCC
CTTCTCGAATCCGAAATTTGCTTTGTCATTGAAGCGCCGAAACTATAAAA
TTAGTAGTTTTTGACGGTTAGcgcagcagagattttcatgctaaattttt
GTCCAGTCGGGACGAACAGAATTCTTTGAGCAAGCGAAGATATAGCCATT
GAACCCGACTGTTGTTGGCACATCGAAGGGCTACTACTTAacctctccga
tggtatattggccacATCGAAGTttgtaaaagaaatcaaatccAAATAAT
TTTCTCCATTAAATCGCAATTTCAGGAGCCCAAACAATCGATAGTTGGCC
GTCTATATTCAAAGATTACAAGAAAGACGGTTATGTCACAATGCACAGCG
AAGATCAAGCATGGATTGCCGCTTTCAATTTTCGACTGATGGGATTCTCT
AAACCACCTGCGCATAAGTATCTCCGTTCTTGGTGGCAACGCTCGGCGGA
CTTACGATGTACAAATGAATCGCGGGCGGACTCGTGCCCAATTAAATACG
TTTTGAATTATTATAAAGACTTTCGACTAGAATATGACAAAGAATTAAGT
TTAGCATATTTGTCGACGTCAGCATTAACACATAATGAGCCTGAGAAGAT
TCATATGTTCGATGAAGggtttttgaatttcttcaaagACATGAAAAATT
CTGGGAAACTGGATTCAACTATAGTAATTTTCTTTGGTGATCATGGTATG
AGGGACGGCAATTTTCGGCATACAGCACAAGGCACAACTGAAGAAAGACT
CCCGTTTATGAGTTTAACATTTCCACCTAGATTTTACGCCGAGCATCCAA
ATAAAATACGAAACTTGAAACGAAATTCTGAGGTTTTAACAACTCCCTAT
GACATGCATGTAACACTGAAGCATATATTGGATTTGACAAAATCACCGGT
CAAGCATACATACGGAAAGAGCCTGTTTCAAAACATTGTAAAACATAATA
GAACGTGTGCTGATGCAGGAGTTCCATTTACGTGGTGTGTATGTACCGAA
TTTGTTCCGGTACAGAAAAACAACGGACAGGTACTCAACGTTGCTAAGGA
AATGGTTAAaacaataaataataaattaacCTCCAAACCTGAGTCGCGTG
ACCGATGTGTAGAACTTGAACTAGATTCAATCATCCGCGCAGGAATTCTG
TCACTAAAACATGGGGATAGGTTATACGATACCTATCAAATAGTATTCAA
AGTGAAGCCGAATGGAGGTATATTTGAAAGTTCCGCTGAATTAAATAAAA
AGGATAAAACAATAAAAGTGAACGTGAATTTCAGTCGGTTAAATCACTAC
GGGAAACAACCGAAGTGTATTGAACAGAGATACCCATACTTgcgtaaatt
ttgtttttgtaaagattATATTTCATag Coding sequence (CDS) from alignment at sc0000182_pilon:461473..467000+ >XLOC_012194 ID=XLOC_012194|Name=XLOC_012194|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4326bp|location=Sequence derived from alignment at sc0000182_pilon:461473..467000+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTAAGCCGTTACCTGACTGCAATATGTATCCTTTCAATCACAAC
ACTAGGCTATATCTATTTCGTGCACTACAACGAAACATCCACTCAtttga
aatatatcaaatataGTCTGTTTAATAAATTATGTATTGATCAAGGCCTT
CAGACGGCCTGGTGTCGTCAGGAAGAGGTCCTTGCAGATAAGATTGAGAG
CAACGATAATAAACTTTTAGACAAAATAGTgcgaaagaaattgaaagaaa
aacttAAGAAGGAGATTAACCAGTACAAACTTAATAAACAAGTCAAactc
aacaacaaaagaaataaacaaGAACAAGATACATCGTTGAAGCGCATAGA
CCATGAAATCAAGAGTACAGCTAGACCAACAAAGACTACTAAAACACCAT
CTTCAACCTGGATTCCAACAACAGGCTACCGGCGCAAGCCACAGAAATGC
AATATACCCATAGTGGATCCTTTTCACCGCGAAGTTCGACCATACATTAC
TTACAAATGGACGCAAAAATGTACTCTAGCCTGGGAGAAATCTCGAGTGG
AAAAAGGGTTCTTGTACGTAGACCTTGCAGATGTGTCGGCGGTAAATATG
AGTTACATAAAACGTATAAGTGATGAGGATAATGAATTGGACACACGGAA
TATTTATCATGAGTCGACCTCGACAAGGTCTAAGAAAGATGAAATTAAGC
CGTTACCTGACTGCAATATGTATCCTTTCAATCACAACACTAGGCTATAT
CTATTTCGTGCACTACAACGAAACATCCACTCAtttgaaatatatcaaat
ataGTCTGTTTAATAAATTATGTATTGATCAAGGCCTTCAGACGGCCTGG
TGTCGTCAGGAAGAGGTCCTTGCAGATAAGATTGAGAGCAACGATAATAA
ACTTTTAGACAAAATAGTgcgaaagaaattgaaagaaaaacttAAGAAGG
AGATTAACCAGTACAAACTTAATAAACAAGTCAAactcaacaacaaaaga
aataaacaaGAACAAGATACATCGTTGAAGCGCATAGACCATGAAATCAA
GAGTACAGCTAGACCAACAAAGACTACTAAAACACCATCTTCAACCTGGA
TTCCAACAACAGGCTACCGGCGCAAGCCACAGAAATGCAATATACCCATA
GTGGATCCTTTTCACCGCGAAGTTCGACCATACATTACTTACAAATGGAC
GCAAAAATGTACTCTAGCCTGGGAGAAATCTCGAGTGGAAAAAGGGTTCT
TGTACGTAGACCTTGCAGATGTGTCGGCGGTAAATATGAGTTACATAAAA
CGTATAAGTGATGAGGATAATGAATTGGACACACGGAATATTTATCATGA
GTCGACCTCGACAAGGTCTAAGAAAGATAAATTGGCCATCAAACTAGAAG
ATGATTTCATTCGAGTTGacatcaaaaccaaaacaaaagagaaacctTTC
TCCGAATATCTCATGTATCCTGTCAAAAAGCCACCCCAAAAGGGCGAGCC
GCCCTTCAAGAACTATGACGCCCAAAAAGACAAATACAACGTATTGATGG
TGATGACAGATTCGGTTTCTCACGCATGCGCACAAAGATATCTGACTAAA
ACGTACAAATATTTGCAAGAAAATCCACACACTGTCATTATGAAGATAAA
TTGGCCATCAAACTAGAAGATGATTTCATTCGAGTTGacatcaaaaccaa
aacaaaagagaaacctTTCTCCGAATATCTCATGTATCCTGTCAAAAAGC
CACCCCAAAAGGGCGAGCCGCCCTTCAAGAACTATGACGCCCAAAAAGAC
AAATACAACGTATTGATGGTGATGACAGATTCGGTTTCTCACGCATGCGC
ACAAAGATATCTGACTAAAACGTACAAATATTTGCAAGAAAATCCACACA
CTGTCATTATGAAGGGACATACTATTCTTGGTGACGCCACCACGCCACAA
ATCTCCGCCATGTTCTTTGGCGGCAAACCAGAACATTTAACGCCAGAAGG
ACGAAAAGGAGAAAGGGGGACATACTATTCTTGGTGACGCCACCACGCCA
CAAATCTCCGCCATGTTCTTTGGCGGCAAACCAGAACATTTAACGCCAGA
AGGACGAAAAGGAGAAAGGGGAGCCCAAACAATCGATAGTTGGCCGTCTA
TATTCAAAGATTACAAGAAAGACGGTTATGTCACAATGCACAGCGAAGAT
CAAGCATGGATTGCCGCTTTCAATTTTCGACTGATGGGATTCTCTAAACC
ACCTGCGCATAAGTATCTCCGTTCTTGGTGGCAACGCTCGGCGGACTTAC
GATGTACAAATGAATCGCGGGCGGACTCGTGCCCAATTAAATACGTTTTG
AATTATTATAAAGACTTTCGACTAGAATATGACAAAGAATTAAGTTTAGC
ATATTTGTCGACGTCAGCATTAACACATAATGAGCCTGAGAAGATTCATA
TGTTCGATGAAGggtttttgaatttcttcaaagACATGAAAAATTCTGGG
AAACTGGATTCAACTATAGTAATTTTCTTTGGTGATCATGGTATGAGGGA
CGGCAATTTTCGGCATACAGCACAAGGCACAACTGAAGAAAGACTCCCGT
TTATGAGTTTAACATTTCCACCTAGATTTTACGCCGAGCATCCAAATAAA
ATACGAAACTTGAAACGAAATTCTGAGGTTTTAACAACTCCCTATGACAT
GCATGTAACACTGAAGCATATATTGGATTTGACAAAATCACCGGTCAAGC
ATACATACGGAAAGAGCCTGTTTCAAAACATTGTAAAACATAATAGAACG
TGTGCTGATGCAGGAGTTCCATTTACGTGGTGTGTATGTACCGAATTTGT
TCCGGTACAGAAAAACAACGGACAGGTACTCAACGTTGCTAAGGAAATGG
TTAAaacaataaataataaattaacCTCCAAACCTGAGTCGCGTGACCGA
TGTGTAGAACTTGAACTAGATTCAATCATCCGCGCAGGAATTCTGTCACT
AAAACATGGGGATAGGTTATACGATACCTATCAAATAGTATTCAAAGTGA
AGCCGAATGGAGGTATATTTGAAAGTTCCGCTGAATTAAATAAAAAGGAT
AAAACAATAAAAGTGAACGTGAATTTCAGTCGGTTAAATCACTACGGGAA
ACAACCGAAGTGTATTGAACAGAGATACCCATACTTgcgtaaattttgtt
tttgtaaagattATATTTCATagGAGCCCAAACAATCGATAGTTGGCCGT
CTATATTCAAAGATTACAAGAAAGACGGTTATGTCACAATGCACAGCGAA
GATCAAGCATGGATTGCCGCTTTCAATTTTCGACTGATGGGATTCTCTAA
ACCACCTGCGCATAAGTATCTCCGTTCTTGGTGGCAACGCTCGGCGGACT
TACGATGTACAAATGAATCGCGGGCGGACTCGTGCCCAATTAAATACGTT
TTGAATTATTATAAAGACTTTCGACTAGAATATGACAAAGAATTAAGTTT
AGCATATTTGTCGACGTCAGCATTAACACATAATGAGCCTGAGAAGATTC
ATATGTTCGATGAAGggtttttgaatttcttcaaagACATGAAAAATTCT
GGGAAACTGGATTCAACTATAGTAATTTTCTTTGGTGATCATGGTATGAG
GGACGGCAATTTTCGGCATACAGCACAAGGCACAACTGAAGAAAGACTCC
CGTTTATGAGTTTAACATTTCCACCTAGATTTTACGCCGAGCATCCAAAT
AAAATACGAAACTTGAAACGAAATTCTGAGGTTTTAACAACTCCCTATGA
CATGCATGTAACACTGAAGCATATATTGGATTTGACAAAATCACCGGTCA
AGCATACATACGGAAAGAGCCTGTTTCAAAACATTGTAAAACATAATAGA
ACGTGTGCTGATGCAGGAGTTCCATTTACGTGGTGTGTATGTACCGAATT
TGTTCCGGTACAGAAAAACAACGGACAGGTACTCAACGTTGCTAAGGAAA
TGGTTAAaacaataaataataaattaacCTCCAAACCTGAGTCGCGTGAC
CGATGTGTAGAACTTGAACTAGATTCAATCATCCGCGCAGGAATTCTGTC
ACTAAAACATGGGGATAGGTTATACGATACCTATCAAATAGTATTCAAAG
TGAAGCCGAATGGAGGTATATTTGAAAGTTCCGCTGAATTAAATAAAAAG
GATAAAACAATAAAAGTGAACGTGAATTTCAGTCGGTTAAATCACTACGG
GAAACAACCGAAGTGTATTGAACAGAGATACCCATACTTgcgtaaatttt
gtttttgtaaagattATATTTCATag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:461473..467000 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1063-2163:4428 |
| Aaloc | 958-1059:3173 |
| Aaloc | 691-957:2536 |
| Aaloc | 1-687:1 |
|
