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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:505696..509744+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012192 ID=XLOC_012192|Name=XLOC_012192|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4049bp|location=Sequence derived from alignment at sc0000182_pilon:505696..509744+ (Clytia hemisphaerica_ch_hm2_pilon)
atattcgaatgttttcgatacgatgtaaacaaatatggcggatTGGTAAA
TCTCGAAACATCGCTATTTTTATccgttttgttgatttttcttgaCTTTG
GTGCCGACAAAATGGTAAGAATTCATTAATTTTAATAAGCTTTTCATGAC
TTCCATAGTGATCATCAATGATTTACCCgttaaatatgaaaataaagtgA
ATACTAGGTTGGGAGAATATTTTCCGTTTTAACCATCTTTTGAATGATTG
AGGTCACATTTTTTATACAGGGCAGACGTAACAGAAACTTCTTCAGTACC
TAGTTAGTAGgtgttttttcttgtatttttctttatatataTTCAATGAT
TGAGACATGTATCACGGTACGATGTAATGATTTTGAgagcttgaaaataa
aattctgaGCGTGACCCAAATTCCCGACGGCACAAGACAAGCTGACCCAT
GCACGTTCGGGGCGTTTGGAAAACGATCTGAAAcgatatcataataatat
aataataataataataataataacatatatTTTAAGTGGCATGCTCCAAA
AAATTCTAAAGCTTTTAGTGTTTAGGCAGCTGaagaattgtttccacaaa
GGGCCACTATGAACAGAACAAGAACTGGGAAAATCGAACAAGACAGAAAG
ACTTAAATTTAATTATCTAACaaaaaaagtactccaggatgcaagtgaaa
tttttctatCTGTGGACCTAGACGGGGTTCAGTTATAATCAGTTagtagg
gttagggttggagcttaAGAGTCACACTAGGGTATTCGTGCCCCCCTAGG
CTAgacttaacttaggatcccagggatccttgtagggttgggagctttgt
TAATTAAGGtcctgtaaattacacgctataggtatttgtgaatgacagca
tTCTGCAGTGTCTTGTTGGCGCAATCAGGTAGGCATTGGATTTGTAAACC
AAGATTGCTTGCATTTGGGGGTTCGAGCTGAGGTGGGAGACTATCTATTT
CACCAGTATGGGCCTGTATGGGCaagtttcagaaaaatacttagaaagca
gttagaaacacttgaaaaagttagaaaatcagaatagaaaatagGATCAA
AGTCGAAATTAGGAGGgaaataagagaggatgcatcctggagtatgatat
cgttttcCGATCGTTTGGGGCATGTTCAAGCCAGGTTTTAGAGGGAAAAT
CTAAGACTTTTTTGCTCAAACTTGGTTCAAGCAttgattttttgacaaaa
aaatgttttgctaTTTCAGCTAGCCTGTAACATGACCCAAAAATGTTCAG
GTATATCTATTCAAGCCATACTAATTGTGGGTTGTCACCTGAAATCTTAA
GCTActgccttctttaaaaaatggatATACTGTAGAagatggtttgaaat
attttacaatGAATTTCCACCATGTAACTGAACAAAGCATAGCAAAACCT
CAATCAAAAtatctatttctccagatctcttttctatctctgtttatatc
tctatctattttattttgacttttagtaagaaaataaagaatttcaaaaa
cttaagaacCGTGTCAAGAACCCCTTTTTagtaatttcaaattgtgattt
ctcaacttttggaaaaaagttagaaaaaaatcaaaggttTTAcccccccc
ACCCCGCAGAAGGTTTTTGCAAGCTAAATAtatcaaaccatctgattatc
ccttcgAGTCTGCATTGCAATGGCTACGGtctaataataacaataaaata
ataaattatctAGCCTTAATTTCAGCTTATAGAAGAGCTTGTCAGAGTCA
AAAATACTTCTGACACATTTATCTTTGTGTCAAAAATTTAATTAGAATAA
AAATCAGATAGGGGGCTTTAAAGTACCTCCATACaaaaaaaGGAAGTTTG
TAGCATCAAAATGATAAAGTAAACAATAGCTTCCACTATTCTTTCACTTT
TCATCtccattttatttgaaattatttttcacaaaaattagaGTACCAGT
ATTCTGAATTAACTTGTTAAGAAATgacaagcaaaataaagattaGCGCA
CACTTTACTTTAAAGTGAATGCACTTAAGCATAAAACACTTACCCAGCAA
GCCAGTATAAAAGGGaataaattgattttgtttaaaatgatGCAATCCAc
ttaaactttttttccaaaatatgtgTTACAGTGGTCATCATCAACCCTTA
TTAACCCAAAGTTTGGTTTCAACTTATTAAAGTTCACTTGTTCACTTCAC
ACGGGTCGACCCTTGCTACGTTAGGGGAAATGGGTAGACAGTCCAGGGCT
GTGTTAACGGCATTATTATCTTTACTTTTTTAGGATCTCAACAATATGCC
ACCAAAACCACCGCCATATGTCATGTGTTATTTATGTGGAAGAAAATATG
GCACCAAATCGATTGTCATTCATGAGCCAAGCTGTATTAAAAAGTGgcat
gctgaaaataagaaattaccCAAACATTTGAGACGTAAAATGCCAACGAA
ACCTGATTACAGTAAATTAGCAAGTGGTGATTACGATGGCAATTATGTTG
ATCAAATGAATGATGCAGCTTATAAAGCGGCACAAGAACAATTGATTCCT
TGTGGGAATTGTGGTAGAACTTTTTTACCGGAACGGTTACAAGTTCATCA
GAAGTCTTGCACTGTTGACAATCCAATGAAAAGTAGGACAGGAGGAAAAC
CAGCTTCAAGTAGTTCATCCAATCCTGAAATCAATAACAACAGGCCGACA
ACTAGTGATGGGAATAGTGTTAATCCAACACAATCAAATACACCATCAAA
GATAattcataaaaacaaactttgttGTTTGTGTATGAAAAAGATTCCAA
CATCTATTCTTCCAAATCATTTGGTAAAATGTAATGACTCTAAAATAGTA
GAATTGAAAAACTCTGATGATTTATCAGAACCATCACCTTCGTCAAGTGT
AGAACGTAAAAATActtttaacaaaggaaaaatcgCTCAGAAACCAAAAG
CATCAAGCTCGACATCCTCGCAGGAAAGTGTCAACCAATCAACATACGAT
CTAGATGATTCACAGTCCGTAGAAAGGCCGTCAACCAGAACATTAAAACG
AAGAACACCATCTAATAACACACAAGGGACTTACGATGTCGATTCTCCAG
ACGAGGATCCTGTTCCTccaaaaccaaaacctagcaaaacaaataaacca
aagaaatctccaatcaaccaaGCACCATCATCCAACAATGATTTTGCAGA
CCAGGTAGATCAACAACAAGGTGACGTTTCGTTAACACCGTGCCATCTTT
GTAATCGAAAGTTTGCTTCAGATCGTATCGATAAACATATGGTTATATGC
CAGAAAACGAGTTCCAAAAACCGTAAAGTATTTGATTCATCAAAACAACG
TTCTGTTGGAAGTGATGCTAACCCGCTCAAAAAGTCTAGTAGTTCTTCGT
CAGCACCGAAGAAAGGTGGTGGTAACTGGCGTCAAACGCATGAGGACTTT
ATTCGTTCAATTCGTGCAGCTAAACAAGTTACCAAACACATGGCAAGTGG
TGGTAAAGCATCAGATCTACCTCCGCCACCACCATCCTTGAATCCTAATT
ACGTCCATTGCCAGTACTGTGATCGTAGATTCAACCCTGAAGTTGCTGAA
CGACATATTCCTAAATGTGCTACTACACAGAATCGACCAAAACCACCAAA
ACAGAAAGCATTAGACGTCTATAATAAAAAACCACAACCCAAAACAACAT
CTAAACCAGTCAGCTCAGCTAGAAAGAAACCATCCAACCAAAAAGTAGGC
TCCAACAATAACCTGTTACGACAATCATCAAGTGGGGGTTATAACAGTCC
AACTATCGACCGAGGATATCAAAATTACGACACGCCCTCTTCCAGTAAAC
AAAGTTTTAGCAGGAGCAGTCCAAGGCAACAAGGAAATGATCCTTACAAG
GCAAAAACTTTCAATGGCATCAACAACAGGACTCCTGCTGCGAATAGAGG
GTTTACATACAATGCAATGAATCATACGGGACCAAATTTCTTTGGTTAA Coding sequence (CDS) from alignment at sc0000182_pilon:505696..509744+ >XLOC_012192 ID=XLOC_012192|Name=XLOC_012192|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3660bp|location=Sequence derived from alignment at sc0000182_pilon:505696..509744+ (Clytia hemisphaerica_ch_hm2_pilon)
atattcgaatgttttcgatacgatgtaaacaaatatggcggatTGGTAAA
TCTCGAAACATCGCTATTTTTATccgttttgttgatttttcttgaCTTTG
GTGCCGACAAAATGatattcgaatgttttcgatacgatgtaaacaaatat
ggcggatTGGTAAATCTCGAAACATCGCTATTTTTATccgttttgttgat
ttttcttgaCTTTGGTGCCGACAAAATGGATCTCAACAATATGCCACCAA
AACCACCGCCATATGTCATGTGTTATTTATGTGGAAGAAAATATGGCACC
AAATCGATTGTCATTCATGAGCCAAGCTGTATTAAAAAGTGgcatgctga
aaataagaaattaccCAAACATTTGAGACGTAAAATGCCAACGAAACCTG
ATTACAGTAAATTAGCAAGTGGTGATTACGATGGCAATTATGTTGATCAA
ATGAATGATGCAGCTTATAAAGCGGCACAAGAACAATTGATTCCTTGTGG
GAATTGTGGTAGAACTTTTTTACCGGAACGGTTACAAGTTCATCAGAAGT
CTTGCACTGTTGACAATCCAATGAAAAGTAGGACAGGAGGAAAACCAGCT
TCAAGTAGTTCATCCAATCCTGAAATCAATAACAACAGGCCGACAACTAG
TGATGGGAATAGTGTTAATCCAACACAATCAAATACACCATCAAAGATAa
ttcataaaaacaaactttgttGTTTGTGTATGAAAAAGATTCCAACATCT
ATTCTTCCAAATCATTTGGTAAAATGTAATGACTCTAAAATAGTAGAATT
GAAAAACTCTGATGATTTATCAGAACCATCACCTTCGTCAAGTGTAGAAC
GTAAAAATActtttaacaaaggaaaaatcgCTCAGAAACCAAAAGCATCA
AGCTCGACATCCTCGCAGGAAAGTGTCAACCAATCAACATACGATCTAGA
TGATTCACAGTCCGTAGAAAGGCCGTCAACCAGAACATTAAAACGAAGAA
CACCATCTAATAACACACAAGGGACTTACGATGTCGATTCTCCAGACGAG
GATCCTGTTCCTccaaaaccaaaacctagcaaaacaaataaaccaaagaa
atctccaatcaaccaaGCACCATCATCCAACAATGATTTTGCAGACCAGG
TAGATCAACAACAAGGTGACGTTTCGTTAACACCGTGCCATCTTTGTAAT
CGAAAGTTTGCTTCAGATCGTATCGATAAACATATGGTTATATGCCAGAA
AACGAGTTCCAAAAACCGTAAAGTATTTGATTCATCAAAACAACGTTCTG
TTGGAAGTGATGCTAACCCGCTCAAAAAGTCTAGTAGTTCTTCGTCAGCA
CCGAAGAAAGGTGGTGGTAACTGGCGTCAAACGCATGAGGACTTTATTCG
TTCAATTCGTGCAGCTAAACAAGTTACCAAACACATGGCAAGTGGTGGTA
AAGCATCAGATCTACCTCCGCCACCACCATCCTTGAATCCTAATTACGTC
CATTGCCAGTACTGTGATCGTAGATTCAACCCTGAAGTTGCTGAACGACA
TATTCCTAAATGTGCTACTACACAGAATCGACCAAAACCACCAAAACAGA
AAGCATTAGACGTCTATAATAAAAAACCACAACCCAAAACAACATCTAAA
CCAGTCAGCTCAGCTAGAAAGAAACCATCCAACCAAAAAGTAGGCTCCAA
CAATAACCTGTTACGACAATCATCAAGTGGGGGTTATAACAGTCCAACTA
TCGACCGAGGATATCAAAATTACGACACGCCCTCTTCCAGTAAACAAAGT
TTTAGCAGGAGCAGTCCAAGGCAACAAGGAAATGATCCTTACAAGGCAAA
AACTTTCAATGGCATCAACAACAGGACTCCTGCTGCGAATAGAGGGTTTA
CATACAATGCAATGAATCATACGGGACCAAATTTCTTTGGTTAAGATCTC
AACAATATGCCACCAAAACCACCGCCATATGTCATGTGTTATTTATGTGG
AAGAAAATATGGCACCAAATCGATTGTCATTCATGAGCCAAGCTGTATTA
AAAAGTGgcatgctgaaaataagaaattaccCAAACATTTGAGACGTAAA
ATGCCAACGAAACCTGATTACAGTAAATTAGCAAGTGGTGATTACGATGG
CAATTATGTTGATCAAATGAATGATGCAGCTTATAAAGCGGCACAAGAAC
AATTGATTCCTTGTGGGAATTGTGGTAGAACTTTTTTACCGGAACGGTTA
CAAGTTCATCAGAAGTCTTGCACTGTTGACAATCCAATGAAAAGTAGGAC
AGGAGGAAAACCAGCTTCAAGTAGTTCATCCAATCCTGAAATCAATAACA
ACAGGCCGACAACTAGTGATGGGAATAGTGTTAATCCAACACAATCAAAT
ACACCATCAAAGATAattcataaaaacaaactttgttGTTTGTGTATGAA
AAAGATTCCAACATCTATTCTTCCAAATCATTTGGTAAAATGTAATGACT
CTAAAATAGTAGAATTGAAAAACTCTGATGATTTATCAGAACCATCACCT
TCGTCAAGTGTAGAACGTAAAAATActtttaacaaaggaaaaatcgCTCA
GAAACCAAAAGCATCAAGCTCGACATCCTCGCAGGAAAGTGTCAACCAAT
CAACATACGATCTAGATGATTCACAGTCCGTAGAAAGGCCGTCAACCAGA
ACATTAAAACGAAGAACACCATCTAATAACACACAAGGGACTTACGATGT
CGATTCTCCAGACGAGGATCCTGTTCCTccaaaaccaaaacctagcaaaa
caaataaaccaaagaaatctccaatcaaccaaGCACCATCATCCAACAAT
GATTTTGCAGACCAGGTAGATCAACAACAAGGTGACGTTTCGTTAACACC
GTGCCATCTTTGTAATCGAAAGTTTGCTTCAGATCGTATCGATAAACATA
TGGTTATATGCCAGAAAACGAGTTCCAAAAACCGTAAAGTATTTGATTCA
TCAAAACAACGTTCTGTTGGAAGTGATGCTAACCCGCTCAAAAAGTCTAG
TAGTTCTTCGTCAGCACCGAAGAAAGGTGGTGGTAACTGGCGTCAAACGC
ATGAGGACTTTATTCGTTCAATTCGTGCAGCTAAACAAGTTACCAAACAC
ATGGCAAGTGGTGGTAAAGCATCAGATCTACCTCCGCCACCACCATCCTT
GAATCCTAATTACGTCCATTGCCAGTACTGTGATCGTAGATTCAACCCTG
AAGTTGCTGAACGACATATTCCTAAATGTGCTACTACACAGAATCGACCA
AAACCACCAAAACAGAAAGCATTAGACGTCTATAATAAAAAACCACAACC
CAAAACAACATCTAAACCAGTCAGCTCAGCTAGAAAGAAACCATCCAACC
AAAAAGTAGGCTCCAACAATAACCTGTTACGACAATCATCAAGTGGGGGT
TATAACAGTCCAACTATCGACCGAGGATATCAAAATTACGACACGCCCTC
TTCCAGTAAACAAAGTTTTAGCAGGAGCAGTCCAAGGCAACAAGGAAATG
ATCCTTACAAGGCAAAAACTTTCAATGGCATCAACAACAGGACTCCTGCT
GCGAATAGAGGGTTTACATACAATGCAATGAATCATACGGGACCAAATTT
CTTTGGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:505696..509744 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 115-1830:2334 |
| Aaloc | 1-114:1 |
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