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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:515559..518935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012181 ID=XLOC_012181|Name=XLOC_012181|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3377bp|location=Sequence derived from alignment at sc0000182_pilon:515559..518935- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAGGTTGAAAATGAGAAAATGGACAGTTGTCCCTTTTGCCTCTG
TAGGAAAAAGGTAATCAGTAGCGGTCTACTTGAATTTCACTAGTGGTGCC
CTCTCTTTCTTTTTGTTTTGTTTTACTTCCTCGGTTATTTGTAATTATTA
CCATGTTATAGGCTAAGGTGATTTGATATCTTCCTTTTAATAACCTATTT
TTCATGATATCTGATGTACACGTTTTTTCATAAGAACAAACTATATATGA
ACATAATGTTTCAATTGGCCAAAATGTTTTAAGAACATTTTAAGGATTTT
GCAGACTCTAAAACACCCAATTTCATAGGAAAATGAACAAAAATGCTCAA
AAAATGGTGAAAATAAGAACGTGCTAAGAACAATTTTTAGGTATAAAACT
CGAAAAGTTAAGAACATCCGAAGGGTTAAAAATTTTTGGATGTTTTTACA
AAAAAAAAAGCGGTCTACTTGAATTTCACTAGAGGTAACTCCCGTTTTTT
GTGTTTTACCACATTGGTTATTGGTATTAATTACCGTGGTATAGGCTAGG
GTGATTTGAGATCTTCATTTAATGACCTAATTTTCATGGTATCTGATATA
CAGCATACCTAGTGTTGCGTGTATTTCTTCTTTTTTATCATAGGTCGAGC
AGTCTAGCCTGTTGTCACATACAAAAAGCTGTAGGTTGATGCAGAAAGAA
GCAGAAGACAATGTCATGACATTACAAGGTCGTAAAATCAAATGTTCTGA
AGCTTATGAGAGGCTCTTGGAAAGTCGTGACTCAGTTACCAATGCAAATA
AATTGATTGGGAAGTACAATCAAGAAATTGAAAATTTGACTGGGAAATTG
AAAATACTCAAACCGTGTGTAAAATTATTTTTACTCTAAGAAACTTTCTG
ATACATTAAATTTTAGAAGATTCCAACTAGCACATAACGTTCTTTCAACG
TTCGTCTAACGTTAAATGGACGTTGTGAACACAAGATAAACGTTGAAAGA
ACTTTGTGAGATTCATATTATCTCATGATATTATGATTTCATCCGTATGT
TTGTGATTTAATTTTCAGAACTAACAAAGAAGTGTCAGACTTTGAAGAAA
ATGAATTGCAACTTACTCCTATAAAACCGTGAGTGTTAATAGGCGTTAGG
CCATCTTTTTATAAAGAGTCGTTAGAGTGTAATCCACTCCCACCCGAGTA
TTAGCAATGGGCTTTTCAAGAAAAAATTGAATATGGGGGTGGAAGATGTA
ATATTTTTGGAAATTTACCACCCGGACATTGTGACTTTTGACCCCCCCCC
CCGACAGCAGATCTACCCCCCCGTACAAGCATCAGTTGACCCCCCTGGAC
ATTTGAAATTACCCTAAAACTCTGCAAAAAGTGTCCCCAAACAGAGCAAG
TTTACCCCCCCTGGACAAGGAGAATTTTGTAGATTTTTCACTACCCCCCC
AGACACTATATCTTCTACCCACACTATATACAGACATTTCTTGGAAGAGC
CCAATGTGAAATTTGTGAGATCGAAACCCATTCGAATCGTTTCGCACTTC
CCGTAAGTGTATATTCCAACATATATAGGGGGATTTTTAAAGAAAGAAAA
TTCCTTTTTATTATAGAGCACCTGCTGTTTACTTCGTACATTACGGTCCG
AAAACCATATTGTCAAATTTTGTTTGTCAATATATTGTGTAGTCTAAGTA
GCCCTTTAGGAACCAATTCATTTGTATGACCAGGTCGGGACTTGACCGAC
AACCTTGCCCACCGGGACCGAATGTAGTTCTTCCAATACTGTGTTTAAAA
GCTAAGGAAAAACATATGTTTTATTCTATTTATTCGTCCATCAGGTGGTC
AAAATATGATCGTAATGACAATCAACAAAATAGCGGTTTGTTTTAAATAT
AATTTCATTCATTGATTATTTATCATATGTATTGGTTCTTTGAAACTTAC
CTTAAATGAATTAATTTACACGAGAATTATATTTTGCGAGTTTCCCAAAA
TTCGTGAAATTCGCGAAATTTGATTCTCGTAAAATCTTTCAAACCTGAAT
TCTTCCCAAAAACCAATTTTTTGCCAAAACCCCTAAGAAAATTATAGATA
TTAGTTGAAAAAGAGGCCGATTCGCGAAAATAAATCCCACAGAAAATTTT
TTTTGAAAAAAAATTATCTCGCAAATATTGAGGTAATTAATATTTTTTAG
TACGCCCATTCTTTATTTCGAGTACCCTCATAGGAGCCCTCCCCCCCCCG
CTTTAAAACAATATCATTGTAGTGGACAAATACCTCTTTCCATTCCCATC
GCAAAATTCATCCCGACTGAGACTGGTAATTGGCAACCTTATTACTTGGG
AGAAAATGCTCTGAAAATGGCATTCTCAGCTTCAGCAGCCAAACTCCATG
ATGGTGATATTCTTAGCATATTCTTAATTTTTTGTCCAATTTCATCATGA
ACATTCTTATAAAGTAGGTTCTTACAAAGAAAAGCGTGAATTGTCATCTT
TTAGTAATATTCAACTCTTTCTTATTAGATTCTATCACAACGTTGCTTCT
CGATCACATCAAGGGAAACAATCAGCAAGCTCTAACCTATCTTCTTATTA
AATACAGCAAGGAAGTAAACAAAACTGATCTCATAATTTTGTTTACCAAA
GCTCTTAGATTGTGCACACATAATGAAATACACGTTGCTATTCCTATACT
ACTACATTACCATCCTGAACTACTGGATATTGAGTTACCAGAGTTTCAAA
ACACTAAACCAGTATGTGCTGCTCTATCTAAAGGGAATATAATCTTGTTC
AAATACTTGTTAGACCATAGTAATCAAATTGATTTGGGAAATGTTAATGT
TGACATGTTTCAAGGACTGAAAGGCGACGAGAAGAAAATGGTTAAGAAAT
TGCTGAAAAAGAAAAGGTGAGAAATTTCCTCTTTTGGTTAAACACGTAGG
AAAATTACAGAGACTAGTTCACAGGGGATGCATTTTAGGTACCTTTGAGT
AGGTGATTTAAACATTGAATTTCAAATGGGGATGAAGTTAAAGTCAATTA
CTCAGTGGGGCTGAAATTGGAGGGTATTATTCCCACTGAAAACGAAATTT
TGGCCAAATTTTCCAGTGGGGCTGGGTCCCAGCGGGTCTGTGACACATGG
GTGTGAAAAGCAATTTGCAGCAGCCTACAGCCTCATCCCCAGCCTATTTA
TCTTCACTCTACTTCACTCTATGTTAGCTGATGATGCCAGATACTACCCT
GGCACTGTCTAACTTCCAACAACAATAATGTAACAAAACCTAGGAAGTTG
AGCTAAGTCAGCCTATTCGGAATTTGAAATATTGTTTATCATTTTTTAGG
AAACTATGTGGCGATACTAAAAGTTAG Coding sequence (CDS) from alignment at sc0000182_pilon:515559..518935- >XLOC_012181 ID=XLOC_012181|Name=XLOC_012181|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1596bp|location=Sequence derived from alignment at sc0000182_pilon:515559..518935- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAGGTTGAAAATGAGAAAATGGACAGTTGTCCCTTTTGCCTCTG
TAGGAAAAAGATGGCTGAGGTTGAAAATGAGAAAATGGACAGTTGTCCCT
TTTGCCTCTGTAGGAAAAAGGTCGAGCAGTCTAGCCTGTTGTCACATACA
AAAAGCTGTAGGTTGATGCAGAAAGAAGCAGAAGACAATGTCATGACATT
ACAAGGTCGTAAAATCAAATGTTCTGAAGCTTATGAGAGGCTCTTGGAAA
GTCGTGACTCAGTTACCAATGCAAATAAATTGATTGGGAAGTACAATCAA
GAAATTGAAAATTTGACTGGGAAATTGAAAATACTCAAACCGTCGAGCAG
TCTAGCCTGTTGTCACATACAAAAAGCTGTAGGTTGATGCAGAAAGAAGC
AGAAGACAATGTCATGACATTACAAGGTCGTAAAATCAAATGTTCTGAAG
CTTATGAGAGGCTCTTGGAAAGTCGTGACTCAGTTACCAATGCAAATAAA
TTGATTGGGAAGTACAATCAAGAAATTGAAAATTTGACTGGGAAATTGAA
AATACTCAAACCAACTAACAAAGAAGTGTCAGACTTTGAAGAAAATGAAT
TGCAACTTACTCCTATAAAACCAACTAACAAAGAAGTGTCAGACTTTGAA
GAAAATGAATTGCAACTTACTCCTATAAAACCGTGGTCAAAATATGATCG
TAATGACAATCAACAAAATAGCGGTGGTCAAAATATGATCGTAATGACAA
TCAACAAAATAGCGATTCTATCACAACGTTGCTTCTCGATCACATCAAGG
GAAACAATCAGCAAGCTCTAACCTATCTTCTTATTAAATACAGCAAGGAA
GTAAACAAAACTGATCTCATAATTTTGTTTACCAAAGCTCTTAGATTGTG
CACACATAATGAAATACACGTTGCTATTCCTATACTACTACATTACCATC
CTGAACTACTGGATATTGAGTTACCAGAGTTTCAAAACACTAAACCAGTA
TGTGCTGCTCTATCTAAAGGGAATATAATCTTGTTCAAATACTTGTTAGA
CCATAGTAATCAAATTGATTTGGGAAATGTTAATGTTGACATGTTTCAAG
GACTGAAAGGCGACGAGAAGAAAATGGTTAAGAAATTGCTGAAAAAGAAA
AGATTCTATCACAACGTTGCTTCTCGATCACATCAAGGGAAACAATCAGC
AAGCTCTAACCTATCTTCTTATTAAATACAGCAAGGAAGTAAACAAAACT
GATCTCATAATTTTGTTTACCAAAGCTCTTAGATTGTGCACACATAATGA
AATACACGTTGCTATTCCTATACTACTACATTACCATCCTGAACTACTGG
ATATTGAGTTACCAGAGTTTCAAAACACTAAACCAGTATGTGCTGCTCTA
TCTAAAGGGAATATAATCTTGTTCAAATACTTGTTAGACCATAGTAATCA
AATTGATTTGGGAAATGTTAATGTTGACATGTTTCAAGGACTGAAAGGCG
ACGAGAAGAAAATGGTTAAGAAATTGCTGAAAAAGAAAAGGAAACTATGT
GGCGATACTAAAAGTTAGGAAACTATGTGGCGATACTAAAAGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:515559..518935 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 772-798:28 |
| Aaloc | 385-768:848 |
| Aaloc | 343-381:1533 |
| Aaloc | 283-339:2309 |
| Aaloc | 61-279:2735 |
| Aaloc | 1-60:3378 |
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