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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:636088..640799- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012178 ID=XLOC_012178|Name=XLOC_012178|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4712bp|location=Sequence derived from alignment at sc0000182_pilon:636088..640799- (Clytia hemisphaerica_ch_hm2_pilon)
TGTCCAAATAAGGGATGCTATGAATTAATCGAAAAATCGCAGGTAAGAAG
ATTCAGACCATGTTCACACGTTACCCTTCCTTTTCACTCCGGTATGATTT
TCGTTACGGATCGAGTTTGTTCATATTGGTTTCGGAACGTTTCGGAGCAA
GAAAACGGAGCAGTTCCGTTCCGATGAAAAAAGTGGAGTGAAACCTTTTC
AATCTATTTTGCTTTGTAACGTCTTCTTTTTTGACGTTTCGAATTTTGAC
GTTCACACTTGTTTCGGAACCGTCGTCTGAACATCGTCTCAATATACTCT
AAATTTTCTCATGCTGGACAATCACTGTTCAACTACCTTAAATACCGCCA
TTGTTTCTCTAATTACGCCTTATCCGCCCTCGGTTTTGTCAATTTTTTAT
TGCTCTTCTGTGGCATTATTCTAAACTGCATTCGCTTTAAGTGTTGAATA
ACCCTTGTTGTGCATGCCATTTTTCAAACAAATGCTTCAGTATCTAACTA
ATCTCCACGTTCCGTCATACAGGGTGTCCCTAATTAAAGTATCGAGTTTG
AACATGCGATTGAGTAGAAAAGTTTGTATGTGTTATCGCTCTAAAATATA
AGAACGTTCTCCATCACACAGGCTTATTACAAAAGGTAGTTACAACGTAT
AAATTAATCGTAATGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAATT
TTGTGAACACGCACATAAAACTTTCTACTCGTAGTTGTGTTTCGACTCGA
TACTTTAATTAGGGACACCCTGTATAAGCAAATTCTTTTTAAAAAACTTT
AAAGAAGTCCCTCCAGACATATCAGATGTCTCTCTTGACAATAATTCATA
GTTTTACGATTGTATCACTTTTTTACGACTCTTAAATCAGCATTTTACCA
ATTTTGTAACGTATGTTTTCACACAGCTTTTATAATTTTTTAGTTACATC
TGATGATTGCTTACTGAGCATGAAACTCGGAAACTCTGAAAAAAGTACAC
ACTTAAAGCGAATGCACTTTTGATTCCTTCCTCTCTACCTCTCGTCATAA
GTTTTACCTCAGTTTTACCTGCGCTAATTATTTTTTGTATTTTCTTTAGT
TACAACATCACGCAGAATATTCATGCAAAACAAATTTAATTTTGTGTCGG
TGGCGACAATATGGCTGCTTGGAAGAGGTATTTGTCAAACGATACATTTT
ATCAAGGAAAACCTTGAGGGAACTAATTTTGGCGTAACTAATTTTCGCAT
TTTTGGGTGTCGACACCCACTTTTTGCCGAAATTCTTTCATATTCCTAGG
GTTTTTTTAGTAAAAAACTGCATTTTGCGGAAAAAACTTTCGCGTTTTTG
GGTGTCTACCGTTCATGGGCTATATGACGTCAAAATGCAATCGGTCATTC
CAACGGCATCTGAGAATTGACTTCAGCGAGATTATGTATCTAGAATTCTC
TACGGCTACAGTTAAAGCGGCGAGGGAAATGGCGAGTAAGGCAAGCAATG
GCGGGTGAAAGCAAGTTCGATATTTGACGTACGACATTATGTCAACTTTG
CTTATACGGTATTTTGGTGTTTTTCCCGTACAGAGCAAAGTAGACAACGA
CATGTTGCCTTTGGCGACGACCCGCATGGGCAGCCCCGCAACTGTAGCCG
TAGAATATCTCCGATACATAATCTCGCTATTATAAATTCCAGGTATACTC
GAATCTTATGCGTTCATTGTTTTCTAGCTTCCTCGTCCCGAAATGGTGGT
CCATCAGGCGGAATGTGAAGTAACTCAAATAGATTACGTCATTATTGATC
ATTATAAAGAAATTATCTCCATGAAGCAAGAGGCAAATAAACTGAACCAA
AAGAAGTTAAATGAAATTACGCCAAAACATAAAGAATTAAAATTGAAAGC
TGAACAATTAAGAGCAGAATGGGAGAAATTTCACCAAAGGTTTGATATGA
AATACTATTTTACCCTACCAGAAAAATGATTACTCAGCATTTATGATAGT
GCAGTGGAGAAAAATTTAGATATTCGGCCGAAATTTTGGCAGCAATCCGT
TCTTTGTCATTTACCCAAAGTTATACACTTACCCTCGACTTTGTTTTGCC
CTGTAGAGGACTCAAACGCTTGGATCTATATGTTTTCAAAAAAATCTATA
TGAACTTCCAAAAGACGCATATTTGTGTATATACCACAGGAAAAAATCTT
CAAATCCCAATGTTTGGGAAATACGTATTTCCAGATCCGGAAAATGATGT
ATTTCCCAAACCAGCCCCAAACTTGGGATTATGCAGCTTGTACGTAGGTT
GTGAATTCCAATATCACAAAGCTTAAAACCAGATCTGGAATAGGGTTGGG
AAACTAGGTTTCCCAAACTTGTTAAAGTTTAGTTCACATTACGGAAAATG
GCTATTAACAATGCTGAACACAAAGATTGAGTTTGTGATTCTGTATAACA
CAATTGGGAAACTCAAATACCCAAATATGATTTGTAAATAAATGTATTCG
ATTATTCGTGAGCATTGGCTCGATAGCTCCCATTCGTTCTGTCATGTACT
TGTGCTACTTTGAGAATCCCGGCACTTTGTCACAACAGCGGAACAACGAC
GTGGTACCGATTGAACGGCCGCACGGCGACTGACGATTCCACTGAGCCCT
TGTGACGCAAGTCAATTGCGAACGGACGAGGCCGCCCTTGCGGAACGCAT
CACCTTTAGCGTTGTGTTACACACTGATCGAATACACAAGTTATGATCTG
AACAGTTTTGACCCAATTTCTACTTTTGGTTTTTCTTACGCATGCGTGGT
ACTAGTTTGGGAAATTGATTTTCACAAATGTGAAATCGATATTTCCCAAT
TTAAACTTTCTAGGTGAAATAATGTCAGATTCTTTGTACTTGAGGTTTTA
GAAAAAAAGTTTTAAATGTTTTAAAAGGGTTTAATTAAAGTTAACCCCGA
AATCACAAGTTTGGGAAATTGCGAATCCCAAACTTATCTAATTTTGAGTT
TTCCAGTACCAAGTTTTTGATTTTATAACAAAGTCTAGTAATTAAATATA
TATATCACAAGCTTGGGAACGGCATTATCCCAAACCTAGTTGGTTGTTTT
AGCTTTAAGTTTGTTATATAAGTTTTCCACATTGTGATTTTGATTTTCCC
AAGGCATGTCTAATTTAACTTAAACTCAAATGCCAATCGTGAAATGCAAT
ATCCCGAACGTCGTAGAATCCCAAACTAAAAATTACAAAGTGAACATGAT
GTGAAAATTTCCAGATACGTAAACTGAAATTCCCAAATTTGGGAATCGAT
GATTTTTTCCTGTGTACTGGGTTAAGATACTGAGTACCAAACTATATACC
ACAAACTATAGGGGGGTTCATGGTTGGCGGAGGAGCAGAATCAATTTTAG
TGCGGAATCAATTTTTCCGAAAAAATGGACTTTTGCAAAAAGTTTCGCGG
AATTACGGAATTTGCAGAAAATACTCAAAATTTCCGGAAATTTTGACGAA
AACCATGAATTTCAAAGGAATTTTCTGCGGTGGAATTTCGGAATCGGGTA
CCCCCTAAACACCCTCCCCCTCATCACCTTATAACAAAAATCAGCTTTTA
AAAAGAATTTGCGCCCCGAAAAGGTTAAGCTGTCCTTAAATACATATCTA
TAGCTATATAATATCTACTATTCCATTCGATACTTTGTATTTTTCCTCCA
AACGTGTACTGTTAGATCAATTTTCATATCTTTCATTTGTATGGATTTGA
ATTTTAGTGAAAGCATGGTGACTACGAGTGATGGACGTTTGAGACTTGTC
AATTTCCAAGGTAAGTAAGTATCCACATAGAACGTCCAAACAACATCCAT
ATGACATCCATAACCTACGTATGGAAATAAAGTTGGATTTTATTCAACCA
ATGGTGCGTGCTATCCTAAAATATGTCCTCGAACCTTAAAGGGAAATCTG
AATCTGGGAAATTATTAGGTCATTTTTAGGTAAGTAATTAACTGCAAGTC
ATTGGGCTAGTTTTGGTTAATGAAAAGTTTTAAGTTTTATCCAACTAAGT
ATTTTCCTTTGAGGGGTAGGCTCATAAATCTGAAATAGAATTTCGACTAT
AAACAGTGGATAAAACACCTTGCCTGGTGACGATGAAAGAAGAGTTCCTC
GAAATTAGCGCAATATCCTGCTCCAGGCTACAAAACATTTCACTATGAAT
TTCTCTGTTTATCAAACTTCCAAATTCTAGATCTTCTAATGTTAATCCAA
GAAAATGATATAATCAATTTCATGCAATATACAAGTCAATCATACCGTCT
GGTTGAGCTACTCGATGAAAACGGGGACACCCTTTTACACCATGCCACCC
GTTACAAACGCCCTGATTTCGTCTTATGGCTTATACAGTTTTCCGAACAA
TACACACAGTGCAAGCCAAATGTTAAAGACCATGATGGTCAAAATTCAGC
CCAAATTGCAGTTACTGTAGACTGTATACCAGTTTTACAAGTTCTCTTAG
ATAATCAACCAGAGCTTCTTAATGAGGATAGAACGAGCCATGGTTCAACA
TTACTGCATATGGCTATTGATCTTGGTTTTGAGGAAATGGCCAAATATAT
ATGTTCAAGAGTTGATGTTGATGTGAATGTGAAAGATATCTTCTCAAAGA
AGCCAGATGATTTAAAAGAAGTCAGTAAGGATGTTAAACGAATGATTAAA
AATCACCGATAA Coding sequence (CDS) from alignment at sc0000182_pilon:636088..640799- >XLOC_012178 ID=XLOC_012178|Name=XLOC_012178|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1734bp|location=Sequence derived from alignment at sc0000182_pilon:636088..640799- (Clytia hemisphaerica_ch_hm2_pilon)
TGTCCAAATAAGGGATGCTATGAATTAATCGAAAAATCGCAGTGTCCAAA
TAAGGGATGCTATGAATTAATCGAAAAATCGCAGTTACAACATCACGCAG
AATATTCATGCAAAACAAATTTAATTTTGTGTCGGTGGCGACAATATGGC
TGCTTGGAAGAGTTACAACATCACGCAGAATATTCATGCAAAACAAATTT
AATTTTGTGTCGGTGGCGACAATATGGCTGCTTGGAAGAGCTTCCTCGTC
CCGAAATGGTGGTCCATCAGGCGGAATGTGAAGTAACTCAAATAGATTAC
GTCATTATTGATCATTATAAAGAAATTATCTCCATGAAGCAAGAGGCAAA
TAAACTGAACCAAAAGAAGTTAAATGAAATTACGCCAAAACATAAAGAAT
TAAAATTGAAAGCTGAACAATTAAGAGCAGAATGGGAGAAATTTCACCAA
AGCTTCCTCGTCCCGAAATGGTGGTCCATCAGGCGGAATGTGAAGTAACT
CAAATAGATTACGTCATTATTGATCATTATAAAGAAATTATCTCCATGAA
GCAAGAGGCAAATAAACTGAACCAAAAGAAGTTAAATGAAATTACGCCAA
AACATAAAGAATTAAAATTGAAAGCTGAACAATTAAGAGCAGAATGGGAG
AAATTTCACCAAAGTGAAAGCATGGTGACTACGAGTGATGGACGTTTGAG
ACTTGTCAATTTCCAAGTGAAAGCATGGTGACTACGAGTGATGGACGTTT
GAGACTTGTCAATTTCCAAGATCTTCTAATGTTAATCCAAGAAAATGATA
TAATCAATTTCATGCAATATACAAGTCAATCATACCGTCTGGTTGAGCTA
CTCGATGAAAACGGGGACACCCTTTTACACCATGCCACCCGTTACAAACG
CCCTGATTTCGTCTTATGGCTTATACAGTTTTCCGAACAATACACACAGT
GCAAGCCAAATGTTAAAGACCATGATGGTCAAAATTCAGCCCAAATTGCA
GTTACTGTAGACTGTATACCAGTTTTACAAGTTCTCTTAGATAATCAACC
AGAGCTTCTTAATGAGGATAGAACGAGCCATGGTTCAACATTACTGCATA
TGGCTATTGATCTTGGTTTTGAGGAAATGGCCAAATATATATGTTCAAGA
GTTGATGTTGATGTGAATGTGAAAGATATCTTCTCAAAGAAGCCAGATGA
TTTAAAAGAAGTCAGTAAGGATGTTAAACGAATGATTAAAAATCACCGAT
AAATCTTCTAATGTTAATCCAAGAAAATGATATAATCAATTTCATGCAAT
ATACAAGTCAATCATACCGTCTGGTTGAGCTACTCGATGAAAACGGGGAC
ACCCTTTTACACCATGCCACCCGTTACAAACGCCCTGATTTCGTCTTATG
GCTTATACAGTTTTCCGAACAATACACACAGTGCAAGCCAAATGTTAAAG
ACCATGATGGTCAAAATTCAGCCCAAATTGCAGTTACTGTAGACTGTATA
CCAGTTTTACAAGTTCTCTTAGATAATCAACCAGAGCTTCTTAATGAGGA
TAGAACGAGCCATGGTTCAACATTACTGCATATGGCTATTGATCTTGGTT
TTGAGGAAATGGCCAAATATATATGTTCAAGAGTTGATGTTGATGTGAAT
GTGAAAGATATCTTCTCAAAGAAGCCAGATGATTTAAAAGAAGTCAGTAA
GGATGTTAAACGAATGATTAAAAATCACCGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:636088..640799 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 388-867:481 |
| Aaloc | 334-384:955 |
| Aaloc | 121-330:2986 |
| Aaloc | 43-120:3614 |
| Aaloc | 1-42:4713 |
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