|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:648030..652666- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012176 ID=XLOC_012176|Name=XLOC_012176|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4637bp|location=Sequence derived from alignment at sc0000182_pilon:648030..652666- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTTAAAATATCTTCTCTTTTAAGTACAATGACGAAACTCTTATTGAT
ATTTTCTCTTCTCGTGGCATTTATCATTAAACCTTCCCATGGCTTCACTT
GCGAAGATTTTTTGCTGGACAACAAACAAGATCGAAAGATCTGTTGTAAG
TTTTAAAAGTTTTAAGATTAAAATTTTCTATGCTTTTGATAAACTATAGA
AGCACATATTATTTTATTAGAACATCCAAAATGTGTGAAGCCTTTGGATG
TTCTTAACTTTTTCAGTTTTAAGCCTAAAAATGTTATTTTCACCTTTATG
TGAATATTTTTGTCCATTTTCCTAAAAATTCGATTGTTTTAGAGGCCGCA
ATTAGAAAAGGTCAAACTAGTTTTTCAAGCAAAAATTAGCTTTGAAAATC
ATTTCCTGGCTCGTTAACTCGTTCTCAAAAAGCTAAAAGAATCGCACTTT
AAGATTTTTTCAATACTTAAAAACTTGGCTTAAAAATTACTTAAGTGCAA
TCAGAAAGGGACGTCAAGGAGTTAAAACCTCACTATTATCCGCTTGTACC
ATTTTAGTTGACGATTTCGGATACGATTTTCGTCACGAACCTTTTGGTTT
GACTATCGAAGAAGCAAACGAAGAATGTGAAGATGTTTATGGTTCTGGTG
GTCTCATCTCCATTCAAAATGAAGACGAAAATAAGTTCCTCATTAATGAA
CTCAAGTATAGGTTAGTTCAAACAATACCCACTTCTCGAGTGATCAATCA
ACAGCATTGCGGGCCTCGTTTTCAAATGAAATAATTGCTCCAAATGACGT
TTACACATGTAGCGTGGTGGGTCGACAAAAAGTCGGGGAATCTGGGGAGG
CAAATTTCGAATATTATGATTTTGCGCCCCCTATGAAATCAATTCTTTGT
AAAGCAAGCCATTTTTCATGCCCTTTTAGCGTCCTGTTATCGGACGCTGC
CCCTAATAAAATCACTGAAATTTTGGTTAAAACAGCCTTTTTAGTGGAAA
ACCCTAGAAAAAGTGCTCCTTTTGGCCACCAACTGACGCTGCCCTACCTT
TCTAAGACTACACGTTTTCTTTTAAGAAACTAGTTTTACCAAGCAGCCTC
AATGTTTCTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTTCTCAGATGT
TTCTAAACTTTTTGATACAACCAGCCTATTTTTCATGCAAAGAAAAAAAA
ACAATTGTTTTGATTGGATTCTTAAAAAAAAAACGAATTAAAAAATGTAA
TTTTCATTCTTCTCATTCTCAGCCTCAGTATGTTTCTTAGATGTTTCTTA
GTTTTTAGGCATTCTGAGCCTCATGATTCTTAAAAGTGTGTTTCTTAAAA
TAAAAAAAAACGTGTACGCGAGCAAAGCGAGCGTGAAAATTTTGGGATGT
TTTCTCTCTGATTCACAAACATGTTACTCGTTAACTAAACTTACATTTAA
TCACAATTTCTCCCTCAGGAAGTTGAAAACTGTGTTTCTTGGTATGAAAA
CAAATGATGAAGGGTCATACGAGTGGCTCGACCAATCACCAATGATCTAC
ACCAACTGGGAAAATGGTATGTTATTAAAACCGTTAAACCCCTTTCAAAA
GCGACCGTAGTGCAGTAGTAGAGCATCCCCAGCCGGGTCATACAAAAGAT
TCCCAAAATGGTACTTGATGCCTCTCTGTGTGATGCTCAGCAATTAAGAA
AAGGGACAAGGGTAAGTGGAGCAATCCAGGGGGAAAGAGTGACGCCCTCC
CCTACCCTCGGGTAGATAGCTATCGAAAGAGGAGCCTCCGACTGCGGTCG
CAGACTTAATTACACCCTCTCTCATTTGGTATATGCGTGGATTTACTCTT
ATTTCGAATTAAATTTACAGTGTGTCCCGAAAAAAAACGGACAAATTTTT
AAATGAAGTAAAATCCTTAAAACTCTTTATGTGAAACGGGCTTAAAATAA
TTAGAATAATTAAAATAAGATTAAAATTCTCTGCTCAATAGATATTACAC
CCATGTCTCTCACCCCGGTTAAACTTTATCCCACAGCGGGGATAAAGATT
TCTATTGAAATCTCAATGGGGATTGAAATTCTATTGCTCCAAGACTAAAA
ATGGGATGGTTTTTGAGTGCAATTTTTAAATGGGGATGAAATCAAAATCA
ATTTCCCAGTGGGGCTAAAATTCTAAGGTATTTTTCTTACAGGGGACGAA
AATTTTGTCAAATTTTCTAGTGATGCTGTGACACAGGGGTGTGATATTCA
ATTCCCAAGATAATTGAATAGGTTTTGGAGATTATGAAATAATTAAATAA
ATAAGTTTATAAAATTTCGCGTAAATCATCGGAATTTTACTTCATTCAAA
AATGTGTCCGCTTTTTCGGGACACTGTTTAGCTCCGACGGATTCATACCG
AGTTAAATAATGATTTTGTAGTCCGTCCACTACCATCTGGATAATGTTTT
TTACAAGCACTTTATTTTCACTATGTTTGGTGAGGAAAGAAAAAATTTTT
AACGATTACTCAAATGGAAAATGGACGGACTATATGTTTAGAACGATTCC
GTGTAACGTCATTTTCACCTACGATCAGCCATTTTTCTAAGAAATGGTAA
AAAGAATATTTACAGGGTGATTTAGTGACACCTTGCTTAGCTCCAAGCCT
TTTAGTGTTTCCGTTTGGACCTGTGCATAGCTTCTTGTTTGTTTTTATTT
CGTGGGTGGAAATCAGACAGTTAAGAACAAGCAGCTTGCTTGAGATTTGG
CCTAATTGGATTTTGCAGAATCAGTATATTTGATATTTTTGTAGGTCGTC
GTCCAACGATTGAGGACGAATTCTTAAATCCATGTATTGAAATAGACGTT
ACCGCAACTAATGGTTCATGGAGTGCTTTAGGTGAAGGTGTTTCTGAGTC
ATGTCCTTTAGTCAAGACAGATTATGTGTGTAAAGTACCTTTAATTCCAC
CAATGGAAAGTTTCAATCATTTCGTGTCTGATGATCGCACATCGTGGGAA
AGTGCTAACGACAGTTGTTCGTTATTTCGAATGTCGCTGGTGATCATCAA
TGACGTGAATGAGAATAAGATGTTATATGAACTGCTGCAACAAAAGTAAG
TTTGAACTCCGTATGAGAAAAGCTGTTGGATTTTTTTTTCTTCACAGAAA
TTAACGTTGATCAAGTTTAATCTGACTTTTTGTCAGCCAAAACAATTCTT
GTATTTTTTCATGAGATTTTCTTACCTCGGAAAGGTTTTCTAACCATAAA
AGGGCTATACTTCATTGAAACATGGATTTATTATAAAGACTCTGGATAAA
CATCGAATGAAACGGTGGAGAGCGAAGTATTGTCTTTTTATTGTTTCAGA
AAACAATCGATGTACAGGCTTTGTCCGCAAAGGACAACTGTCATGGCGGC
TCGAAGGAGTCTGATTTTGAAAAATGATTAATACTCTTTTTTCTAAAAAG
TTCTCTGACTTTTTCTGATCGTACTTTTGCTGGCTAAAAGTTTGAAAATA
AATGTTAGAATACCAACCGAATACATTTATGAAATCTGATGTGAGAAAAA
CACCATCAGACGAGTAAAATCAAACAAAATGCTTATAATGACAAGAAATT
TTGAATTGGGAATATCTTTCCAATATTTCTCCGAGAAGAGCTGAGATTGA
TATATATTAGACGTGAGTCTCATAGCTCCACTGTGGTATGAAAATCTTTT
AGTGGCACGTGGTGGTGCGGTGGCTTTTTTGAGGTTGAAGTTTAAGAATT
TCTGGTGTCAATATTCAATTTCTTATACATAGCATGTTTTTGCACCTTTC
TCGAAACTTAAAACGTCATAACGACGTATAATTAGTAATTAACTAGATGA
GTTTGAATCTCGGAGGAGAACTTAAAGTCTCATTTGGGAATTGGATAAGT
GTATTTTGATGGGAAAGGCAATTAAAATGCTACGAAAAATCTTTTAATGG
TGGATGGAGGGTGAACAATAATGTCATTACTGCGGACAAGGCTTGTACAT
GAGAAATTGGCAAAATTCAGCTCGTTGTTTTTCCAGTGTCTATAATAATT
CCATGATTGAAATTATTCTCGTATTTTTAAAGGAAAGTTATCTGTGTAAT
TCCATTTACTTCTATTTTATATGGAAGAAAAATCTTTCTACATAGGCTCG
ATTGTGATTTATGAAATTTTCTAACCATATTTCTCTGTCTTTTCATTCTT
ACAGTGGTCGCGTCAGAAAGGTATGGATTGGTTTGTCTGGGAACAAGCAA
GGAAAATACCGGTGGGTCAGTGATGACCTGTCCGTATATCGGGACTGGTG
TCCGGGACATCCCAATGATATCAAGATTATCTCAGAAGTCAATGATTGTG
TTACCTATACGATTGATAACGAAAAGGATGATGATAAAGGTTGTTTTAGT
GTTGAGAAGTGTGACCAGGTATTACCTTTTATTTGCGAACGTGAAACCGA
GGAGCAGATTTTGTTCCGGCAAAAGATATCGGAATTGACCAAAACCATAC
GGGAAAATGGCGGACGCCCGTATTGTCCGAATTGTGTGAAGAGAGAAAAC
GAGAAACGAGAAGCAGCAAGACAGAAAGTTGTCGATCAGAAGAAACAGGA
GAAAGAAAAGAAATTGAGACGTGGAAGATTACAGTGA Coding sequence (CDS) from alignment at sc0000182_pilon:648030..652666- >XLOC_012176 ID=XLOC_012176|Name=XLOC_012176|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2262bp|location=Sequence derived from alignment at sc0000182_pilon:648030..652666- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTTAAAATATCTTCTCTTTTAAGTACAATGACGAAACTCTTATTGAT
ATTTTCTCTTCTCGTGGCATTTATCATTAAACCTTCCCATGGCTTCACTT
GCGAAGATTTTTTGCTGGACAACAAACAAGATCGAAAGATCTGTTTCATT
TAAAATATCTTCTCTTTTAAGTACAATGACGAAACTCTTATTGATATTTT
CTCTTCTCGTGGCATTTATCATTAAACCTTCCCATGGCTTCACTTGCGAA
GATTTTTTGCTGGACAACAAACAAGATCGAAAGATCTGTTTTGACGATTT
CGGATACGATTTTCGTCACGAACCTTTTGGTTTGACTATCGAAGAAGCAA
ACGAAGAATGTGAAGATGTTTATGGTTCTGGTGGTCTCATCTCCATTCAA
AATGAAGACGAAAATAAGTTCCTCATTAATGAACTCAAGTATAGTTGACG
ATTTCGGATACGATTTTCGTCACGAACCTTTTGGTTTGACTATCGAAGAA
GCAAACGAAGAATGTGAAGATGTTTATGGTTCTGGTGGTCTCATCTCCAT
TCAAAATGAAGACGAAAATAAGTTCCTCATTAATGAACTCAAGTATAGGA
AGTTGAAAACTGTGTTTCTTGGTATGAAAACAAATGATGAAGGGTCATAC
GAGTGGCTCGACCAATCACCAATGATCTACACCAACTGGGAAAATGGAAG
TTGAAAACTGTGTTTCTTGGTATGAAAACAAATGATGAAGGGTCATACGA
GTGGCTCGACCAATCACCAATGATCTACACCAACTGGGAAAATGGTCGTC
GTCCAACGATTGAGGACGAATTCTTAAATCCATGTATTGAAATAGACGTT
ACCGCAACTAATGGTTCATGGAGTGCTTTAGGTGAAGGTGTTTCTGAGTC
ATGTCCTTTAGTCAAGACAGATTATGTGTGTAAAGTACCTTTAATTCCAC
CAATGGAAAGTTTCAATCATTTCGTGTCTGATGATCGCACATCGTGGGAA
AGTGCTAACGACAGTTGTTCGTTATTTCGAATGTCGCTGGTGATCATCAA
TGACGTGAATGAGAATAAGATGTTATATGAACTGCTGCAACAAAAGTCGT
CGTCCAACGATTGAGGACGAATTCTTAAATCCATGTATTGAAATAGACGT
TACCGCAACTAATGGTTCATGGAGTGCTTTAGGTGAAGGTGTTTCTGAGT
CATGTCCTTTAGTCAAGACAGATTATGTGTGTAAAGTACCTTTAATTCCA
CCAATGGAAAGTTTCAATCATTTCGTGTCTGATGATCGCACATCGTGGGA
AAGTGCTAACGACAGTTGTTCGTTATTTCGAATGTCGCTGGTGATCATCA
ATGACGTGAATGAGAATAAGATGTTATATGAACTGCTGCAACAAAATGGT
CGCGTCAGAAAGGTATGGATTGGTTTGTCTGGGAACAAGCAAGGAAAATA
CCGGTGGGTCAGTGATGACCTGTCCGTATATCGGGACTGGTGTCCGGGAC
ATCCCAATGATATCAAGATTATCTCAGAAGTCAATGATTGTGTTACCTAT
ACGATTGATAACGAAAAGGATGATGATAAAGGTTGTTTTAGTGTTGAGAA
GTGTGACCAGGTATTACCTTTTATTTGCGAACGTGAAACCGAGGAGCAGA
TTTTGTTCCGGCAAAAGATATCGGAATTGACCAAAACCATACGGGAAAAT
GGCGGACGCCCGTATTGTCCGAATTGTGTGAAGAGAGAAAACGAGAAACG
AGAAGCAGCAAGACAGAAAGTTGTCGATCAGAAGAAACAGGAGAAAGAAA
AGAAATTGAGACGTGGAAGATTACAGTGATGGTCGCGTCAGAAAGGTATG
GATTGGTTTGTCTGGGAACAAGCAAGGAAAATACCGGTGGGTCAGTGATG
ACCTGTCCGTATATCGGGACTGGTGTCCGGGACATCCCAATGATATCAAG
ATTATCTCAGAAGTCAATGATTGTGTTACCTATACGATTGATAACGAAAA
GGATGATGATAAAGGTTGTTTTAGTGTTGAGAAGTGTGACCAGGTATTAC
CTTTTATTTGCGAACGTGAAACCGAGGAGCAGATTTTGTTCCGGCAAAAG
ATATCGGAATTGACCAAAACCATACGGGAAAATGGCGGACGCCCGTATTG
TCCGAATTGTGTGAAGAGAGAAAACGAGAAACGAGAAGCAGCAAGACAGA
AAGTTGTCGATCAGAAGAAACAGGAGAAAGAAAAGAAATTGAGACGTGGA
AGATTACAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:648030..652666 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 700-1131:433 |
| Aaloc | 400-696:1842 |
| Aaloc | 301-396:3169 |
| Aaloc | 148-297:4079 |
| Aaloc | 1-144:4638 |
|
