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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:622912..629443+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012088 ID=XLOC_012088|Name=XLOC_012088|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6532bp|location=Sequence derived from alignment at sc0000124_pilon:622912..629443+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAAAGACTTCTATTCAGCAAAGCGACCTTAGGAATTTTATTATG
TAGTTGTGCGTTACTTGGCCTGGCATACTTCCAACCGGACGTCCGAGATT
CgatacaaaatttacaaaagagATTATGGATGGGATCGTAAgaatttttc
tgatattttaagtcattttcagattttctttggGTCGTGAAAAAGGTTTA
AACTGAAAGTACATTTTGAGACATGTTAAATTTCTAAagtcaactttttt
taaaaatatctccTTCTTGTAGAGCTTAAAACTAAGAAAGATTGAAATCA
AGAATGGTCTAAAGCGTAGAAAATAATTCTGCCCCATGGAAGGGTCATCC
TTTTTATTATTTGATAACTAATCTTTGACCTACTAAATAATATTGTATTT
GTGACCTTTCTAACAGAACAGTCAAGACGAAGCTTCATTTGCGTGACACC
ATTTTCAAGCATGCTGCCGTGGCAACTGACAACAAGAAATGCAGTAAAAT
CGGAAGCCAGATACTTAAAGATGGTGGATCAGCTGTAGATAGTGCGATTG
CTTCAATGTTATGTTTAGGTATTGATATGGTTTTTTCTCCCACTACAACA
CCTGTCTCAGCCGCCTTTACCTTTCGCTGGCTGTTGCCGTTCAGTTagct
ctacacgtttttttttttataagaacgtcaaaaattttcgaagccttcgg
atattcttagttttttggaattaaagcctaaaaatgttcttaaaatgttc
ttattttcagcattttttgagcattttgatgtaatttcttaagaaaatgc
atgtttttaagtctccaaagccttagaatgttcttagaatgttcttaaat
ttttgggcctcgaagccttatgttcttatatagtttgttcttataaaaaa
aaaacgtgtagtttagACGCCTCAcctttcgccctgcctattctaattgt
aagAGTAGGCACAAAGTGGACAGTTAACATCTTTGCTAGAAAAgggttga
aagaagacattgcattgacgtcaaaagccaactttctgcccactttaAAT
CACAATTTGAATAgacagggcgaaaagtgggccgtctaaacttaGAGCTT
ACGCTCTAAAATGCCTTTTTACCGGTCTTCCATTAACATGTCGTAAATCA
GAACTAAAGTACCTCTTTTGCAACGAAAATGTCTGAAGTCTAAGAATAGT
TGTCCACGAAGGCTAAGAGCTCTCAAATGGTGCAAAAATTATTCCTtcag
ttttttaaattgaacCCTAATAACAACCTCAAGTTATCTTTTTCCCATTA
CAGGTGTGATGAACCCACACAGTACAGGGATCGGTGGTGGAGGTTTCATG
CTTATTTACAtgaaagagaaagaagaagcaCGTGTTATTGACTTTCGTGA
AAGTGCTCCTTCAAAAGCTCATGAAAATCTGTTCAAAGGAAATCCAGAAA
ACGGCATTAGAGGTGAGTCTTTTGTCTTATAAATCTTCATTTTAGAAACG
ATCTCACTTACTACCGAACGGGAACACAGTGTTACACCATGGCAGTACCT
TTACGGCCAATCACAATTTTAGCTTCTCAAATCTAAAATCAGCCTCTCAG
ATTTGGAATTCGGCTTCTCAGATTATAATTTCAACTTCTCAGTTTTATGC
TATCTTTTTACTATTAAAGTTtatcttcttcaaaaattaagaattgatTA
TTCTGCTTCTCAAATCATCTTTTCAGCTTCTCAGATCATCTTTTTAGCTT
CTCAGATCATCTTTTTAGCGTCTCAGATTAACTTTATAACTTCTCAAATT
GAATAACTGTGTTCTAAATCAAGTTGATGCCTGAGTTAATGCTATTGGGA
ATAAATATAAGCTGAACAGCTGATTTGAGAAGCTGAAAGGCTgagagtaa
aaatttgaaaagtagaaTCGATGATTGGCCAAAAAATACCTCCCATAGCA
TGTTACACTCTTTCTGCTTTATAAGTTTACAGGGAACATTTGGGCTTGGA
CCCATTATGCTTTCCATTTTTAGCCTTTAATTATGCTTATTCATATgttt
agaaagtttttttcaaaacgtcctcaaattttagctaattttcattttac
ctttactttttaCGATATAACAGATCATATTCTTACGTTTTATATCAAAG
AACATTGGGATTCCGAACATTCTTTAAACGTGTTAAAGTCAAAATATTCG
TTTTCTACCTCCCTGTCTCATTGGTCCGaatgtcaaaacaaaaatttgaa
tgatGGATTTTCCCAGCGTCGAGCTCTTCTCAACCAGTAAAAAAGTATCA
ACCCAACGGCGTACGTTCAACATACATAttacattttggaaaaatatttt
atgtgaACTGGATcaaaaaagattgttttttctttttataccaGGTGGAT
TATCTGTGGGAATTCCCGGtgaattacgaggtatgcaatATGCCCATGAG
TTGTATGGAAAACTACCATGGAAAAAGTTGTTTCAACCTGCCATCAAACT
ATGCAATGAAGGATATAAGATCACTGAATCATTGGGAATTGCTCTAGATA
AATGGAAAGATGATGTGATAAATGAGAGTTGTCTCAGGTAAGGTTTCCTA
CATGGcgaagtgacgtcacaatacaacatcttttaatattttcagaCAAA
TTGAGCCCCCACCAAGTCGCTACACGCTTCCTAAGCCTGTAGATTCAGAA
TGTCATTATTTACTCctcgttttttctttttcattctctTCGAGTTAAGT
TTATTGATTTCATTGGCGGTTAGATTATGTAATACAAAGTTGACTCGATG
AACACCCACTTTAGCCCTTTCTTTGAATAAGATGGTCAGGGGCTTCCCTT
ATATACATGCTGCAATCCTCACTACAAGAATATGATACTATGATCTTCAG
CAACCCTTATTTCGGCTTCATCTAACGTTACGTGGACGTTAGATGGACTA
TGAAACAGCATTGTTATAATTATCCGCCGGATATATAAAGATCTTTGCTA
TCTGTTGCCTAAAGTCGAAATACGCAATTTCCATTGCTATTTAATAATGg
gaaatctttttaattttcagaaacCAGTACATTCAAAAGGGTAAAGCATT
AAAAGCAGGAGACACAGTGTACAACAAAGCGCTTGGGAAAACACTATCCA
TCTTGGCTGAAGCAGGAAATGCAGATCCTTTTTATAACGGTGAATTGACC
TCAACTATCGTGAAAGAAATCAAAGCTCAAGGTGGTATAATCtcaaagaa
agatttgaaaaattatgaagcCATCTCAAGAGAACCTCTGGTTACTAAGC
TAGGAGAAGATACGGTTGTGACGTCACCACCACCTGCTAGTGGACCCATT
TTGGCATACATACTAAATATTCTGAAAGGTATGCACTTCCTGTTGTTAGT
GTGGAGATGAAAGGATATTCAAGAGTCTCTTTTTTCAACAAGCACGAAAC
CGCTATCTtgttcaaattctatcaaaagttagtctcAGCTGCATATTATA
CTGTATCGAGACCGACTTCAGTTCGTCTCTTTCACCCGCTCATTACTCGC
TGTCATGTTTCGACGATCTTCTAACGTTTTTCTTAAATTGGCACGATGTT
AAATGGACGCAACAAAGCTGCCACCTCGAATGCATAACCTATggtatctt
tcttctttcaggATATAAAATGGACGAAAGTGATTACGTCAAAGACCCTT
CACTGATCTATCATCGTTTTATTGAAGCGTTCAAATTCGCGTACGCGCGG
CGAACAGAGCTAGCCGATCCAGACCACGCCGAAGGGATTGATGATATCGT
GTTAGAACTAATGAACACTACATATGCCGAGTCAACTCgacaaaaaattg
atgacgaaCGTACGCATAAGCCGAGTTATTACGAGGTGAAGAACTCGGAT
AAAGTGACGACGGGTACAACTCATTTAGTTGTGATCGGGCCACACGGAGA
TGCAGTGACTGTCATGAGTACCGTTAACGGATAGTAAGTTACATATTACC
TATAAATTACCTATATACTATTGTTGAATGAAGACCTATATACTATTGTC
CAATGAAGTTAATGTGCTTTGTATTCGACAATAGTACATATATGCTTCCG
ATTCCGATTGGTCAAGCACTCTTCTGATGAATGAGAGTTCAACTCAACAA
GAAGTTAAATTACCTATATTTTATTGACTGActttttcgagcaacacttt
tgtagtatttttcttcgaacttttagatttaattcattaatttttttaac
aacaaTTATTTCTGGTAGTGGTGGGGTAATTTTATGACACAAACCTTCAT
ACCTAAGATAGGCTTAATAGTCATAGCCTTTCTGCCCGGGGGTTtctttt
cttaacattttccaaaagtAGGGGGCATaagaaaacaatggaaacacACG
GAGTATatcaaaaaggtttttgaaaaaatttccaagggAAGAACTTTCTA
CTTttaaaaccaaaagttttctgtCATCTTTTTAGTTTTAACATTTGCAA
GTTTCACATGCTGGATGACCCAGGAGAAAACtgtggtttttttttaattt
tcttatcatatttttctcttttattctatttaACAGTTTGGGTGCGAAAT
TCCGTTCATGTAAACTAGGCTTTATTTACAACAACGAGATGGATGACTTC
AGCACACCAGGCTTGGCGAACGAGTTTGGTCTTCCACCTTCAGAAGTCAA
TTTTATCCAACCCAACAAACGGCCACTATCGAGTTCTGCACCTACATTGA
TCCTAGATAAAGAATTCAATGTCAAATTAGCGATCGGTGGTTCAGGAGGA
TCCATCATCACCACAGCTGTTGCCCAGGTAACTGCCGCAGCGGAATCGTT
CTATTTTCAGTACCTTTTATCTTGAACAAAACATTGTATTCCTTGGCCAA
AGTTGTGTGTTGATAAAtattaacacccctgtgtcacagaccaaCTGGGA
CACCAGCCCCACTCAAGATTTGGCCAAAACTTCGTCCCCGTTGGAAAAAA
TGTCGTACATTTTCAACCcgactgggaaattgactttgacttcATAAAGG
GAATAAAGTTCACTTTTGATacaattcaaaaaactttttacaagCAAACC
AggtttcaaaacaacaattttaattatttttttttgaagcaagTGCGTTA
AAAGTCTATGTAATAATGAGAAACATGACATAAACATTTGGagatgacgt
aatcttttaagATACCCGAGAGTTGGGCTAAAACTCATCAGATAACAtcc
aaataaaaacttttccCATTTCTCAGGTGATAATGAACAATTTATGGTTT
GGAATGAGTATCCGTGATGCCATCCAACAGCCTCGTATTCATGCACAATG
GGTACCTGACAACGTGTTCGCGGAAACGAGGATGCCTAATGAGACGGTCA
ACACTCTGCAAAAGAAAGGACATAATGTAAGTTAATAGTTTAACGTTTTT
GTGTCTCATTAGACTGTAAGACAGTCGTTTTTTCGTACTCACAAATCGGG
AAATAAGtcgaataataataatagtaagAAAAAAGCCGTGAGTTCAGTTT
GGAATTAAATAACGACGCTAAGCGAACGTAGAGGGCGTAAGGCGAGCGTT
AGCTGCAGTGTCATAGACGACTATTTTAATAGTCTAGTGTCTCATTGACA
TTCATTTGgtttggtgtttttgattttctcttgGACGAAAAAGATAACGA
TTAAAAGTAATTAATACTTTGTTAGAGAGATTTGAAATTAGACCTCAAAA
TAATAACTAAAATCTACGGTGGAGagaaaaaggctgtaacttttgataga
attcgaatgaAACGACGTTTTTgcgcttgttgaaaagataatgagggtgg
aatattttcaaaacagaaaaaaaaaatagaaaaatgaagataagatgaaa
aatgaagcagaaatattagaaaattagaaaatcttcaaaaaatacagctt
aaaatTTCTGACTGGTTGACTACTTTATAAAGAGGgtttttctgtcattt
tttcatgatattttaGTTATAGGTCAATCAGTGCGATATACTTTGGGTTA
TATCTTTCAATTgaattaatatttttgaataattttttcacagtgacaAA
TTTTAAGTTCAATTAATTACAGCACAGTTCgcgaagttgatttttttctc
ttcatttttcatcttcatattcgaaatttatttggtttctttctatttGG
TAATATTCCGCTcttgattatcttttcaatgtgcACATAACCACTATACT
agttcgaattctatcaaaagataCAGCAATCTTTGTCTCCGCTGCACAGG
CTTTGTGTATCATTTGTATATTTTCATCCCTCGATAGATGACAGTAACAG
ATGGAAGCCATGCGGTCGTACAAGCCATTACACGTGtttcaaaacaatgg
aaacgAATCTGTCAAAAAAGCAAAATCGCTGGAAGTGCTTTCAAAACGTT
CTGTagaaactatttgaaaaatcaagttggatttttcgctgaatcagatT
ATCGAAAGGGTGGTGAACCAGATGGTTTCTAA Coding sequence (CDS) from alignment at sc0000124_pilon:622912..629443+ >XLOC_012088 ID=XLOC_012088|Name=XLOC_012088|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3714bp|location=Sequence derived from alignment at sc0000124_pilon:622912..629443+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCAAAAGACTTCTATTCAGCAAAGCGACCTTAGGAATTTTATTATG
TAGTTGTGCGTTACTTGGCCTGGCATACTTCCAACCGGACGTCCGAGATT
CgatacaaaatttacaaaagagATTATGGATGGGATCATGATCAAAAGAC
TTCTATTCAGCAAAGCGACCTTAGGAATTTTATTATGTAGTTGTGCGTTA
CTTGGCCTGGCATACTTCCAACCGGACGTCCGAGATTCgatacaaaattt
acaaaagagATTATGGATGGGATCAACAGTCAAGACGAAGCTTCATTTGC
GTGACACCATTTTCAAGCATGCTGCCGTGGCAACTGACAACAAGAAATGC
AGTAAAATCGGAAGCCAGATACTTAAAGATGGTGGATCAGCTGTAGATAG
TGCGATTGCTTCAATGTTATGTTTAGAACAGTCAAGACGAAGCTTCATTT
GCGTGACACCATTTTCAAGCATGCTGCCGTGGCAACTGACAACAAGAAAT
GCAGTAAAATCGGAAGCCAGATACTTAAAGATGGTGGATCAGCTGTAGAT
AGTGCGATTGCTTCAATGTTATGTTTAGGTGTGATGAACCCACACAGTAC
AGGGATCGGTGGTGGAGGTTTCATGCTTATTTACAtgaaagagaaagaag
aagcaCGTGTTATTGACTTTCGTGAAAGTGCTCCTTCAAAAGCTCATGAA
AATCTGTTCAAAGGAAATCCAGAAAACGGCATTAGAGGTGTGATGAACCC
ACACAGTACAGGGATCGGTGGTGGAGGTTTCATGCTTATTTACAtgaaag
agaaagaagaagcaCGTGTTATTGACTTTCGTGAAAGTGCTCCTTCAAAA
GCTCATGAAAATCTGTTCAAAGGAAATCCAGAAAACGGCATTAGAGGTGG
ATTATCTGTGGGAATTCCCGGtgaattacgaggtatgcaatATGCCCATG
AGTTGTATGGAAAACTACCATGGAAAAAGTTGTTTCAACCTGCCATCAAA
CTATGCAATGAAGGATATAAGATCACTGAATCATTGGGAATTGCTCTAGA
TAAATGGAAAGATGATGTGATAAATGAGAGTTGTCTCAGGTGGATTATCT
GTGGGAATTCCCGGtgaattacgaggtatgcaatATGCCCATGAGTTGTA
TGGAAAACTACCATGGAAAAAGTTGTTTCAACCTGCCATCAAACTATGCA
ATGAAGGATATAAGATCACTGAATCATTGGGAATTGCTCTAGATAAATGG
AAAGATGATGTGATAAATGAGAGTTGTCTCAGaaacCAGTACATTCAAAA
GGGTAAAGCATTAAAAGCAGGAGACACAGTGTACAACAAAGCGCTTGGGA
AAACACTATCCATCTTGGCTGAAGCAGGAAATGCAGATCCTTTTTATAAC
GGTGAATTGACCTCAACTATCGTGAAAGAAATCAAAGCTCAAGGTGGTAT
AATCtcaaagaaagatttgaaaaattatgaagcCATCTCAAGAGAACCTC
TGGTTACTAAGCTAGGAGAAGATACGGTTGTGACGTCACCACCACCTGCT
AGTGGACCCATTTTGGCATACATACTAAATATTCTGAAAGaaacCAGTAC
ATTCAAAAGGGTAAAGCATTAAAAGCAGGAGACACAGTGTACAACAAAGC
GCTTGGGAAAACACTATCCATCTTGGCTGAAGCAGGAAATGCAGATCCTT
TTTATAACGGTGAATTGACCTCAACTATCGTGAAAGAAATCAAAGCTCAA
GGTGGTATAATCtcaaagaaagatttgaaaaattatgaagcCATCTCAAG
AGAACCTCTGGTTACTAAGCTAGGAGAAGATACGGTTGTGACGTCACCAC
CACCTGCTAGTGGACCCATTTTGGCATACATACTAAATATTCTGAAAGgA
TATAAAATGGACGAAAGTGATTACGTCAAAGACCCTTCACTGATCTATCA
TCGTTTTATTGAAGCGTTCAAATTCGCGTACGCGCGGCGAACAGAGCTAG
CCGATCCAGACCACGCCGAAGGGATTGATGATATCGTGTTAGAACTAATG
AACACTACATATGCCGAGTCAACTCgacaaaaaattgatgacgaaCGTAC
GCATAAGCCGAGTTATTACGAGGTGAAGAACTCGGATAAAGTGACGACGG
GTACAACTCATTTAGTTGTGATCGGGCCACACGGAGATGCAGTGACTGTC
ATGAGTACCGTTAACGGATAgATATAAAATGGACGAAAGTGATTACGTCA
AAGACCCTTCACTGATCTATCATCGTTTTATTGAAGCGTTCAAATTCGCG
TACGCGCGGCGAACAGAGCTAGCCGATCCAGACCACGCCGAAGGGATTGA
TGATATCGTGTTAGAACTAATGAACACTACATATGCCGAGTCAACTCgac
aaaaaattgatgacgaaCGTACGCATAAGCCGAGTTATTACGAGGTGAAG
AACTCGGATAAAGTGACGACGGGTACAACTCATTTAGTTGTGATCGGGCC
ACACGGAGATGCAGTGACTGTCATGAGTACCGTTAACGGATATTTGGGTG
CGAAATTCCGTTCATGTAAACTAGGCTTTATTTACAACAACGAGATGGAT
GACTTCAGCACACCAGGCTTGGCGAACGAGTTTGGTCTTCCACCTTCAGA
AGTCAATTTTATCCAACCCAACAAACGGCCACTATCGAGTTCTGCACCTA
CATTGATCCTAGATAAAGAATTCAATGTCAAATTAGCGATCGGTGGTTCA
GGAGGATCCATCATCACCACAGCTGTTGCCCAGTTTGGGTGCGAAATTCC
GTTCATGTAAACTAGGCTTTATTTACAACAACGAGATGGATGACTTCAGC
ACACCAGGCTTGGCGAACGAGTTTGGTCTTCCACCTTCAGAAGTCAATTT
TATCCAACCCAACAAACGGCCACTATCGAGTTCTGCACCTACATTGATCC
TAGATAAAGAATTCAATGTCAAATTAGCGATCGGTGGTTCAGGAGGATCC
ATCATCACCACAGCTGTTGCCCAGGTGATAATGAACAATTTATGGTTTGG
AATGAGTATCCGTGATGCCATCCAACAGCCTCGTATTCATGCACAATGGG
TACCTGACAACGTGTTCGCGGAAACGAGGATGCCTAATGAGACGGTCAAC
ACTCTGCAAAAGAAAGGACATAATGTGATAATGAACAATTTATGGTTTGG
AATGAGTATCCGTGATGCCATCCAACAGCCTCGTATTCATGCACAATGGG
TACCTGACAACGTGTTCGCGGAAACGAGGATGCCTAATGAGACGGTCAAC
ACTCTGCAAAAGAAAGGACATAATATGACAGTAACAGATGGAAGCCATGC
GGTCGTACAAGCCATTACACGTGtttcaaaacaatggaaacgAATCTGTC
AAAAAAGCAAAATCGCTGGAAGTGCTTTCAAAACGTTCTGTagaaactat
ttgaaaaatcaagttggatttttcgctgaatcagatTATCGAAAGGGTGG
TGAACCAGATGGTTTCTAAATGACAGTAACAGATGGAAGCCATGCGGTCG
TACAAGCCATTACACGTGtttcaaaacaatggaaacgAATCTGTCAAAAA
AGCAAAATCGCTGGAAGTGCTTTCAAAACGTTCTGTagaaactatttgaa
aaatcaagttggatttttcgctgaatcagatTATCGAAAGGGTGGTGAAC
CAGATGGTTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:622912..629443 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1663-1857:6338 |
| Aaloc | 1513-1662:5277 |
| Aaloc | 1273-1512:4588 |
| Aaloc | 952-1269:3664 |
| Aaloc | 643-948:3072 |
| Aaloc | 451-639:2397 |
| Aaloc | 292-447:1306 |
| Aaloc | 139-288:418 |
| Aaloc | 1-135:1 |
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