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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:677779..681439+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012086 ID=XLOC_012086|Name=XLOC_012086|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3661bp|location=Sequence derived from alignment at sc0000124_pilon:677779..681439+ (Clytia hemisphaerica_ch_hm2_pilon)
AATAAATATAACTTCCATACCTGCTACAAGATTAAAATCAAACTGAAAtc
aaaccatttttttttgctttttgacaATAATAGTcgaacccccggaaaat
tttaAATGTATCGGAATGAgctattttccaactaaatcacGGCAAGTGAA
GAGCTATCCAACCAACCGGCCGGCCAAAGAAGAAGTCAAGAAGTCAAagt
cttttttttatcttttcttgaTTGCTACTTCTTAGAAAATGAAGGAAGCA
tttatcattttccttttgCTAGTAGCTTCATATCTCATGAAGGTATAAct
ttgtaattttcttttctttttcactttttacactaccttcagggtaattt
ccaagcacttttttaccaccgCTATTCGGTCTGACTAGCTAcctatgcaa
cagtcccatgtttcgaccaatcgtcccaagttagagcagttgacagtatt
tAGTTCAAAATGAAAGTATTGCTTTTATCAaacagttgggtgtttaagat
aaaaactgcaattattacTCTTTTCagcaattattgccgaaaacggcaat
tttttcaatgatgaaatgctgaatcagcagaaaaattcaaaaagtaaata
aataaaaattgccaaaaacggcaattttttcaatgatgaaatgctgaatc
agcagaaaaattcaaaaagtaaatgaataaaaactgcagtttttggcaat
ttttcccgtttttggaaagaaaagtttattttattattattgaaCACATG
GTATTTGGAGCCCTCGCGATAAATAGGCCCAGActcccgcgctcgatagg
atcgatcatcggaacggctcgatgacggatcggtgattgatggattactt
aacgatccggatgatggagatcgatggaagattcagccattaaaaagtca
tgagtatcgatcctttgttgatccattatcgagctagtattttaATCGAG
TATACTGAtacgtcatcgatcgttaagcgattcgtcatcgatcgttaatc
gatttgttatcgattgtTAATTGAGTatgtatgagtcgatagggtcgata
agattgataaaagatcgatgatagatcgataaataatcgataactaatca
taagcttaaaaaaatcagttagtcacactaggaaattaaagctttcagaa
aaaacaacatcagtcatctacaggatacatttcaacaacaaggatgagag
ttacctgaatcaagtttgcaagacaatattaattaaaacttgaaagttgg
aaacaaaataaaccgtgcaacagccaaaatcaaccaaccaaaatttgtca
ttcaattcccgagacagcgcttcgatttttaaggccttgtttatacgcta
aagtatataaaaacaattccgcacatgtaaatgggtcattgctgaggtcc
ggcaaaatttccgggagatagcctatccggcggtgcgcggatctaggtgg
gttccgcctcccccgtagatctttttcttgggaagttgatcttcaaatta
gttttcaaggttggcttggctcaaattttttcatctatggctcaaatttt
aggcaatttctcaaagtttttgaaaatgttaatttcattaaaaagcgccg
ggttattttttcacgaacccctttagaagttttgcggcgcatttttttgc
ttgagagtcaagtaaacgatatagcgctttcgcagcattaatcattgata
cgcattttggcgggacgctagtgtgactaactgaaaaTCTTGAGTAtaga
tcctctatcgatctcctatctggatcgttaagtaatccatcgatcatata
tcgatccgtcatcgagccattccgatgatcgatcctattgAGCGCGGGCG
TCTGgataggcccactgtgcctcgtttagttttgttttcaactagttttt
gttggaaatgcagatagcaaaattgagtcatatgtaaacagaATACAaag
gggttttgttatctctttctggttGTGTTTCGGCATTGATGCAGGGTCTT
TTTGCATATTTTataacttttcatgttattgagcaacgaaaaattgaaaa
aatcacttttaaaaacctgaaaaacctttttctcaatgcaattttacaat
tttcaaacacctctgacatctttgcttTTATAAGGAAAatacattttgct
gattcagcatttcaactttgaaaaaattgctgttttcggcaataattgcc
aaaaggagcaataattgccgtttttatcttaatCACTCAACTTTCAAATG
ATAAAGATaatgtggggggcgtacggtattacGGAATTGCAGAAATCTAC
CtttttttctttggaatttcggaaatcagggAGAATTCCTTCGGTACTtc
agaattctgaaattgttttggTATCGGAAATCCTTGAATTTTTGCTCTGA
GATTTCAGTattatatataaagtttttatcctcctttttcggaattcatt
aatgaaaaatcaaatttgatggaaaattagtcaaaacgaggaaaaatacc
ccaaaTATTGGTATCGGAATTGAAAGTATTACTTTGaggaaatttggaaa
ttttcgcTAAATTATTTGGTATTTCGGAAACTGTAcccccccTATCATGA
TTGGCATCAACATTCACATTAAACTGctccaaaacatttcaaattttaag
gttGTTTTTTCATAATCAAATTTCAAGACCAAAACGGTGGTAAGGAAAAG
AGCTTGGAAATTACCCTGTGCCTTCTCTGTGGAGGAATCGAGGAGATCTC
TTTCCCTATACTTTGCCCTAATTTTACTATTCATACTGTAGTGACTTTCA
ATATACGTCGTCCTGCAGTTTTATTGATGAttgataaaattattttcagg
tcGTCAATGCAACTCAATATTTTCCATGTCCAACATGTCCTAAGGGACAA
GGTTTGAATGAACCGACAGTTGACAGTCATCACTGTTATGGTACCACAAA
ATGCATTCCATGTGAGCTTGGGGTAAATTTCAACGAATATGATAATTCGA
TGCGTTTGTGTAGTAACTGCTCAAAATGTGGAGACAATGAAGTAGCTACA
CAAAACTGTACGCTGGCTCAAAATTATATTTGTGACTGTCTCCCTGGATT
TGGAAGGAACAGCATTGAGACATGTACTCCTTGTTGTGAGTTGTATTGTG
AAGAAAATGAACGAATGTCTGCAAGAAACAAAATATATTGTAGCCCAACG
TCAATTGTGAgtatattttattgatttaagataaattcttttttcattgc
cAAAAACCAGCAATTTTCTGGAAAGTTGAGTCTAGTTGGTTGTATAATAT
ATACcatttttcaacactttttgttatttggacTATTGCTCGAACTGCTA
AACTAGGGAATGAGGATCAATTGCCATGCAAAGTTCTAATTCCCTAGGGT
Gatcaattttcattattttgattataattgtttatacacatttttgattt
tctttgcaatttttcaatttagcaAAACTGTCGTTGTAATGGTAATATAG
TGATTTCTCTTTCACCTACCGATTCAACACCAAAGACAACTGCAACTCCA
GCCATGAAAAACACAACCAAGGCTGTAAATCACAATGATACCCAAGATAC
CAAAGTCAATGTCACTGTCATTTATATTTCTGTGTTTACTGTATTAGCCA
TCAGTATTGCA Coding sequence (CDS) from alignment at sc0000124_pilon:677779..681439+ >XLOC_012086 ID=XLOC_012086|Name=XLOC_012086|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1266bp|location=Sequence derived from alignment at sc0000124_pilon:677779..681439+ (Clytia hemisphaerica_ch_hm2_pilon)
AATAAATATAACTTCCATACCTGCTACAAGAATAAATATAACTTCCATAC
CTGCTACAAGAAAATGAAGGAAGCAtttatcattttccttttgCTAGTAG
CTTCATATCTCATGAAGAAAATGAAGGAAGCAtttatcattttccttttg
CTAGTAGCTTCATATCTCATGAAGgtcGTCAATGCAACTCAATATTTTCC
ATGTCCAACATGTCCTAAGGGACAAGGTTTGAATGAACCGACAGTTGACA
GTCATCACTGTTATGGTACCACAAAATGCATTCCATGTGAGCTTGGGGTA
AATTTCAACGAATATGATAATTCGATGCGTTTGTGTAGTAACTGCTCAAA
ATGTGGAGACAATGAAGTAGCTACACAAAACTGTACGCTGGCTCAAAATT
ATATTTGTGACTGTCTCCCTGGATTTGGAAGGAACAGCATTGAGACATGT
ACTCCTTGTTGTGAGTTGTATTGTGAAGAAAATGAACGAATGTCTGCAAG
AAACAAAATATATTGTAGCCCAACGTCAATTgtcGTCAATGCAACTCAAT
ATTTTCCATGTCCAACATGTCCTAAGGGACAAGGTTTGAATGAACCGACA
GTTGACAGTCATCACTGTTATGGTACCACAAAATGCATTCCATGTGAGCT
TGGGGTAAATTTCAACGAATATGATAATTCGATGCGTTTGTGTAGTAACT
GCTCAAAATGTGGAGACAATGAAGTAGCTACACAAAACTGTACGCTGGCT
CAAAATTATATTTGTGACTGTCTCCCTGGATTTGGAAGGAACAGCATTGA
GACATGTACTCCTTGTTGTGAGTTGTATTGTGAAGAAAATGAACGAATGT
CTGCAAGAAACAAAATATATTGTAGCCCAACGTCAATTcaAAACTGTCGT
TGTAATGGTAATATAGTGATTTCTCTTTCACCTACCGATTCAACACCAAA
GACAACTGCAACTCCAGCCATGAAAAACACAACCAAGGCTGTAAATCACA
ATGATACCCAAGATACCAAAGTCAATGTCACTGTCATTTATATTTCTGTG
TTTACTGTATTAGCCATCAGTATTGCAcaAAACTGTCGTTGTAATGGTAA
TATAGTGATTTCTCTTTCACCTACCGATTCAACACCAAAGACAACTGCAA
CTCCAGCCATGAAAAACACAACCAAGGCTGTAAATCACAATGATACCCAA
GATACCAAAGTCAATGTCACTGTCATTTATATTTCTGTGTTTACTGTATT
AGCCATCAGTATTGCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:677779..681439 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 448-636:3473 |
| Aaloc | 118-447:2877 |
| Aaloc | 88-114:2850 |
| Aaloc | 31-87:236 |
| Aaloc | 1-30:1 |
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