|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:707543..711820+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012084 ID=XLOC_012084|Name=XLOC_012084|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4278bp|location=Sequence derived from alignment at sc0000124_pilon:707543..711820+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACTTTCAAGAAAAGCCAAACAAAAAGGTCTTGAATTAATGAACAG
AGGTCGAACCAAAAACAATCATTCATCATCAGATGCAAATGAAGCACCAA
AGGATTGTGTAGTTTGTTTGGATAAAGTGAATGTTAGAGGTGTCATCATT
TGTGCACactggttttgttttgtttgcatTCATGAGTGGTCAAAGGTAAA
TAGATATTTGTTGACACTTTCATCTTTCGTTTCTTCCTTGTAATGCATAG
TAACAATATAGAAAGAACAGAACACAGCTCATTTAAATGAAAACCCTTGG
ACagattttctttgcttagttcagacccccccctttcttaagggtgAGGG
GTGACACCTTCCACAAAAATGAGGAAGGGGGcggtcagaaattttcatga
aaaagggggggggatagtttaagaaggaattttatttttcctaaaCCATT
CAATCCATACAGTCAAtttatttgtatattttcacttttttagaaaacaa
atACTTGCCCACTGTGTAAACAAAGGTTCCGATGTATTACAAAGGTATTG
CAATTTTTATATTTGTATTAATTGATTAAAAATGAGACGTGTATATTTTG
GTACTCAGAGTTTCATGCCGCCCGTATTGAGGACAATTATCAGCCAAATA
AATTacgttttttaaaaatacaaaattcaaTAAGGTATATTTAATAATTA
GTGTATAATAATGGTATTTATAACTTATATATACAGACAACGCTAAAGAC
TCTGGGTCAAGTgggattttaaaattgaattagaaAATACCAAATATCTT
TTCTTTACAGTAAATAATTCTTGTTTTCCAGGTGACAGTAGGTAAACCTT
ACATTCCCACTCAAAAAGTACGTATCAAGGACAAGAACCAGAGTAACATC
AGTTTTGCTGAAGACGATTATGAAGTAGCAATGGGTCTAATTGCAGAAGA
TTCTTTGTCCGAAGACACCGATAATGACCCTGATGAAAGCTTCACGCCAA
GTTACAATATTCCCACTGTCAGAGGTCGAGCCATCAGATTAAGATCAGGT
CGAACAACATCTACAGCCTCATCTTTAATAACAAATTATACAACCAGACA
TGCACAACTTAGTAGTAGCGATCAGCGACAACAGAGCTCAAGGGAAAGAC
AAACCAGAGCTGCTAGGAGACAACAATTGACAGAAGAGCAAGAAACAGAT
GCTTCTGAAGATGAATTTGTAGCTCCTCTTGATAACGATGATGTTAATGA
TGACGATGATGCATTTGAGGAACCAAGTGCAGCTTCAACAACAACTTCAG
GTtttattaaaatgttttatGTGGTATTTTTGCTAGCATACATTTCCAAG
TGTTAGACTTTATGTattcaaaatattataattCTGCTGTTTGTACAAAT
CATACCTTACTTATATCATAATATTTTACTTTCGTTATTTTCAGCAGTTA
GGCAGGATGTGCAGGATTTACCAATAAACAATGACAATGAGAGCGATTCA
GTGCAAAACAGTTCCAATGATGAAGCAGAAGCTGTAGAAGAAgataaaca
ttccattgaaactGTTTCTTCGCAATCCAGGTATACGTCCCTTTTCATTA
ATACAAAGCTCCTAGAAAGATTTCaagacaaattttctttttaaattatc
CATTGGTTTTTTCTTGGTAAAGTGACTGCTAGACTGTCGTGATTTATTTT
CAGTCAGCTTTCAAGTTAATTGAAATTgtccatgtttttttttcagctcA
ATCTTAATTTCTTCAACAGTAATAAAGCCTCCCAAACGAAGAAAGAGtaa
gaattttctaaaatttcattttgttttaagTTTGTCTCACAGAGTTTCTT
GATTGTagactaccttattggaactaattttcgcgggaactaattttcgc
ggtcggaaaaaaatatatcagaaaaattgcatttcgcgggttctaatttt
cgcggtttttttcattctggaattttggcgggttttaattttcgcggttt
tgcccttttttggacaaatttctttcattttcctagggatttttcaaatt
tttcaataaaattggaaaaagctgtatttcgcgggaattaattttcgcgg
ctTTCAACTCTCAAAttttttcgcgggatcaaattttcgcgattttgacg
aaaaactgcgaaaaacgctaaaattaaaacccgcaaaaattagttccaat
aaggtaaagCTTGTCAATTTTGGGTTTTTGGTTTGATTTGCATGCTATGT
CTCACTCAGGGCCAAAACGTCTCTTCTCTTCCTCTAAGCGCTCAACTGAA
TATTGCATTAGTTTGGCCAAAGTTGTTAGGCAAAAAGTTATGGTGGCTAA
TGAAGCTATATTTTTACCTTAGGAATGGTTTTTGTAACAATCTACCGTTT
TGTCTGTTGTCTCCAATTGTCTTTAAAATTCAAACatctttttcaaatat
tcaGAGCGTAAAAGTATCAGATATTGTCCAAAGGTTGACAAAAGAAGATC
TTCAGGTTCGACACGAGAACAATGGATTGATATGAGTCACAAACAAACTA
CTTCAAGAACAAGGTCAGAATTAAATTTTATTCAATGTTCTGAGTATCCA
GTCTTCTAATCATACTAAATACCTGGGAATGGTCGATTTCCCAACAATGA
CTTTGTGGAATGATAAAAAAGCCGGTCAAATTCTTTTCATTAAAGAGGAT
GAAacgttaattttcaattttctaccTCTTAAGTTATTTCCAGGTTATTA
CTTTAAATTATTGTCTTTCAATCCTTGTCTTCTCATTTTCAATCAAAGTA
GAACTATAAAACCAAGGAGACCAAGCATCACAACCCCTTCAACCTCATCC
AATTCCAAGAAATATCCAAGTCGTGTCGGTCGAGATCAAGCAATGGAGAA
AATTAGGAGACAAAACAGAATGGTTCAAATGTCAATGACAACATTCGTAT
CTCAATATTCACCAGAGAATGAAGAACAAAATTCATCCAGTGAGGAAGAT
TGCGAATCTTCTGAAGAAGAAGATAGAACGGAATTAGAATCAAAAGATAG
TCATGATAACCAACAAGGCTCTTCGAGGAGAGGAGAGGAGTTACGTGGTA
GAAATGTTGCGAGCTCTAGCAGTTGTAAGATTGCAAATGATATGAAAAAA
CGCATAGAAGTATTACTGTCTTCAGATGAAGATCAACACTCTAATAATGA
AAATTCCGACGAAGATCTAAGCATGATTGAGCCAGTTACTACAAGATCAA
AACGACTTAAACGTCTGCAACTTTTACCTGACAGCAGTTTCGAACAAGAA
GACTCGCCTGTGCGTAAACCTCCCCCCAGGAAAtgcaatgaaaagaaaac
tattttAACATCAGATGATCTAGCCTCACCTATTCCACTATCAACACATT
CATCACCAGCAAGCAATACAGCCATCACAAGATCTTcagaaaataagaga
aaattatgtgattttgaaataaagttTGATGAAAGTTCTGAAAGCACGGT
GGAGATCACACACCCTAAAATATCTGATCAACATAAGACAACACCTCCTA
GGAGACAATACAAATTCCGCAAAATCAAACATGATGATAACAATGAACCT
AAAATGATGGCATCTGGGAAATCGGGGATTTGCACAACAAGACCTTCTTT
ATGGAGTACTGTGAATGACAGCAAAGAAAACAAACTTGCAATAGAATCAT
CTTCCTGTTCCAATATAATTTATTCTGGTGTAAACCAAAGTAAACCTTCC
AGTTCCAGAGATGCTAGCTCTTTAAAAAACAAAGAGAATAGAGTGACCAA
ACTGGATAACAGAGGGAAAAGCATCAATATTTCAATTCAAGATGATTCAG
TCCAGGATGACTGTATTTTCGCGTCTGTTTTACACACACCATCGGCCGTG
AACGACATTCTTAATGATTTCAACTGGGACTCGAATTCACTTGACGAGAC
AGTATCTCCATGTGTTTTATCGCAAAAGTCAACTTGTACTGATAGAGTTG
CAACCACTCCAAAGGAAAATCCAAACTCATCCAAAACAGGTAGAAAGTCT
ACAAATTGCATAGAGGGACAAAAGAATTTCGAAACCTCCACGACTTGTAG
AAAAACTATAATTGAGGAGACACCTCTGAAAGATATGGTTAAGAAATCTA
AAGCTGATATTAGTCCTATTTCACCGTTTGGAGATAAGAAAGCattcaat
tttcgAaaattcagaaGAACTTTCCGCCATTATAGTCCTGTTTCTAGAGA
TTCAATTATCATTTGTACCACTCCTTGA Coding sequence (CDS) from alignment at sc0000124_pilon:707543..711820+ >XLOC_012084 ID=XLOC_012084|Name=XLOC_012084|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4980bp|location=Sequence derived from alignment at sc0000124_pilon:707543..711820+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACTTTCAAGAAAAGCCAAACAAAAAGGTCTTGAATTAATGAACAG
AGGTCGAACCAAAAACAATCATTCATCATCAGATGCAAATGAAGCACCAA
AGGATTGTGTAGTTTGTTTGGATAAAGTGAATGTTAGAGGTGTCATCATT
TGTGCACactggttttgttttgtttgcatTCATGAGTGGTCAAAGATGGC
ACTTTCAAGAAAAGCCAAACAAAAAGGTCTTGAATTAATGAACAGAGGTC
GAACCAAAAACAATCATTCATCATCAGATGCAAATGAAGCACCAAAGGAT
TGTGTAGTTTGTTTGGATAAAGTGAATGTTAGAGGTGTCATCATTTGTGC
ACactggttttgttttgtttgcatTCATGAGTGGTCAAAGaaaacaaatA
CTTGCCCACTGTGTAAACAAAGGTTCCGATGTATTACAAAGaaaacaaat
ACTTGCCCACTGTGTAAACAAAGGTTCCGATGTATTACAAAGGTGACAGT
AGGTAAACCTTACATTCCCACTCAAAAAGTACGTATCAAGGACAAGAACC
AGAGTAACATCAGTTTTGCTGAAGACGATTATGAAGTAGCAATGGGTCTA
ATTGCAGAAGATTCTTTGTCCGAAGACACCGATAATGACCCTGATGAAAG
CTTCACGCCAAGTTACAATATTCCCACTGTCAGAGGTCGAGCCATCAGAT
TAAGATCAGGTCGAACAACATCTACAGCCTCATCTTTAATAACAAATTAT
ACAACCAGACATGCACAACTTAGTAGTAGCGATCAGCGACAACAGAGCTC
AAGGGAAAGACAAACCAGAGCTGCTAGGAGACAACAATTGACAGAAGAGC
AAGAAACAGATGCTTCTGAAGATGAATTTGTAGCTCCTCTTGATAACGAT
GATGTTAATGATGACGATGATGCATTTGAGGAACCAAGTGCAGCTTCAAC
AACAACTTCAGGTGACAGTAGGTAAACCTTACATTCCCACTCAAAAAGTA
CGTATCAAGGACAAGAACCAGAGTAACATCAGTTTTGCTGAAGACGATTA
TGAAGTAGCAATGGGTCTAATTGCAGAAGATTCTTTGTCCGAAGACACCG
ATAATGACCCTGATGAAAGCTTCACGCCAAGTTACAATATTCCCACTGTC
AGAGGTCGAGCCATCAGATTAAGATCAGGTCGAACAACATCTACAGCCTC
ATCTTTAATAACAAATTATACAACCAGACATGCACAACTTAGTAGTAGCG
ATCAGCGACAACAGAGCTCAAGGGAAAGACAAACCAGAGCTGCTAGGAGA
CAACAATTGACAGAAGAGCAAGAAACAGATGCTTCTGAAGATGAATTTGT
AGCTCCTCTTGATAACGATGATGTTAATGATGACGATGATGCATTTGAGG
AACCAAGTGCAGCTTCAACAACAACTTCAGCAGTTAGGCAGGATGTGCAG
GATTTACCAATAAACAATGACAATGAGAGCGATTCAGTGCAAAACAGTTC
CAATGATGAAGCAGAAGCTGTAGAAGAAgataaacattccattgaaactG
TTTCTTCGCAATCCAGCAGTTAGGCAGGATGTGCAGGATTTACCAATAAA
CAATGACAATGAGAGCGATTCAGTGCAAAACAGTTCCAATGATGAAGCAG
AAGCTGTAGAAGAAgataaacattccattgaaactGTTTCTTCGCAATCC
AGctcAATCTTAATTTCTTCAACAGTAATAAAGCCTCCCAAACGAAGAAA
GActcAATCTTAATTTCTTCAACAGTAATAAAGCCTCCCAAACGAAGAAA
GAAGCGTAAAAGTATCAGATATTGTCCAAAGGTTGACAAAAGAAGATCTT
CAGGTTCGACACGAGAACAATGGATTGATATGAGTCACAAACAAACTACT
TCAAGAACAAGAGCGTAAAAGTATCAGATATTGTCCAAAGGTTGACAAAA
GAAGATCTTCAGGTTCGACACGAGAACAATGGATTGATATGAGTCACAAA
CAAACTACTTCAAGAACAAGTAGAACTATAAAACCAAGGAGACCAAGCAT
CACAACCCCTTCAACCTCATCCAATTCCAAGAAATATCCAAGTCGTGTCG
GTCGAGATCAAGCAATGGAGAAAATTAGGAGACAAAACAGAATGGTTCAA
ATGTCAATGACAACATTCGTATCTCAATATTCACCAGAGAATGAAGAACA
AAATTCATCCAGTGAGGAAGATTGCGAATCTTCTGAAGAAGAAGATAGAA
CGGAATTAGAATCAAAAGATAGTCATGATAACCAACAAGGCTCTTCGAGG
AGAGGAGAGGAGTTACGTGGTAGAAATGTTGCGAGCTCTAGCAGTTGTAA
GATTGCAAATGATATGAAAAAACGCATAGAAGTATTACTGTCTTCAGATG
AAGATCAACACTCTAATAATGAAAATTCCGACGAAGATCTAAGCATGATT
GAGCCAGTTACTACAAGATCAAAACGACTTAAACGTCTGCAACTTTTACC
TGACAGCAGTTTCGAACAAGAAGACTCGCCTGTGCGTAAACCTCCCCCCA
GGAAAtgcaatgaaaagaaaactattttAACATCAGATGATCTAGCCTCA
CCTATTCCACTATCAACACATTCATCACCAGCAAGCAATACAGCCATCAC
AAGATCTTcagaaaataagagaaaattatgtgattttgaaataaagttTG
ATGAAAGTTCTGAAAGCACGGTGGAGATCACACACCCTAAAATATCTGAT
CAACATAAGACAACACCTCCTAGGAGACAATACAAATTCCGCAAAATCAA
ACATGATGATAACAATGAACCTAAAATGATGGCATCTGGGAAATCGGGGA
TTTGCACAACAAGACCTTCTTTATGGAGTACTGTGAATGACAGCAAAGAA
AACAAACTTGCAATAGAATCATCTTCCTGTTCCAATATAATTTATTCTGG
TGTAAACCAAAGTAAACCTTCCAGTTCCAGAGATGCTAGCTCTTTAAAAA
ACAAAGAGAATAGAGTGACCAAACTGGATAACAGAGGGAAAAGCATCAAT
ATTTCAATTCAAGATGATTCAGTCCAGGATGACTGTATTTTCGCGTCTGT
TTTACACACACCATCGGCCGTGAACGACATTCTTAATGATTTCAACTGGG
ACTCGAATTCACTTGACGAGACAGTATCTCCATGTGTTTTATCGCAAAAG
TCAACTTGTACTGATAGAGTTGCAACCACTCCAAAGGAAAATCCAAACTC
ATCCAAAACAGGTAGAAAGTCTACAAATTGCATAGAGGGACAAAAGAATT
TCGAAACCTCCACGACTTGTAGAAAAACTATAATTGAGGAGACACCTCTG
AAAGATATGGTTAAGAAATCTAAAGCTGATATTAGTCCTATTTCACCGTT
TGGAGATAAGAAAGCattcaattttcgAaaattcagaaGAACTTTCCGCC
ATTATAGTCCTGTTTCTAGAGATTCAATTATCATTTGTACCACTCCTTGA
TAGAACTATAAAACCAAGGAGACCAAGCATCACAACCCCTTCAACCTCAT
CCAATTCCAAGAAATATCCAAGTCGTGTCGGTCGAGATCAAGCAATGGAG
AAAATTAGGAGACAAAACAGAATGGTTCAAATGTCAATGACAACATTCGT
ATCTCAATATTCACCAGAGAATGAAGAACAAAATTCATCCAGTGAGGAAG
ATTGCGAATCTTCTGAAGAAGAAGATAGAACGGAATTAGAATCAAAAGAT
AGTCATGATAACCAACAAGGCTCTTCGAGGAGAGGAGAGGAGTTACGTGG
TAGAAATGTTGCGAGCTCTAGCAGTTGTAAGATTGCAAATGATATGAAAA
AACGCATAGAAGTATTACTGTCTTCAGATGAAGATCAACACTCTAATAAT
GAAAATTCCGACGAAGATCTAAGCATGATTGAGCCAGTTACTACAAGATC
AAAACGACTTAAACGTCTGCAACTTTTACCTGACAGCAGTTTCGAACAAG
AAGACTCGCCTGTGCGTAAACCTCCCCCCAGGAAAtgcaatgaaaagaaa
actattttAACATCAGATGATCTAGCCTCACCTATTCCACTATCAACACA
TTCATCACCAGCAAGCAATACAGCCATCACAAGATCTTcagaaaataaga
gaaaattatgtgattttgaaataaagttTGATGAAAGTTCTGAAAGCACG
GTGGAGATCACACACCCTAAAATATCTGATCAACATAAGACAACACCTCC
TAGGAGACAATACAAATTCCGCAAAATCAAACATGATGATAACAATGAAC
CTAAAATGATGGCATCTGGGAAATCGGGGATTTGCACAACAAGACCTTCT
TTATGGAGTACTGTGAATGACAGCAAAGAAAACAAACTTGCAATAGAATC
ATCTTCCTGTTCCAATATAATTTATTCTGGTGTAAACCAAAGTAAACCTT
CCAGTTCCAGAGATGCTAGCTCTTTAAAAAACAAAGAGAATAGAGTGACC
AAACTGGATAACAGAGGGAAAAGCATCAATATTTCAATTCAAGATGATTC
AGTCCAGGATGACTGTATTTTCGCGTCTGTTTTACACACACCATCGGCCG
TGAACGACATTCTTAATGATTTCAACTGGGACTCGAATTCACTTGACGAG
ACAGTATCTCCATGTGTTTTATCGCAAAAGTCAACTTGTACTGATAGAGT
TGCAACCACTCCAAAGGAAAATCCAAACTCATCCAAAACAGGTAGAAAGT
CTACAAATTGCATAGAGGGACAAAAGAATTTCGAAACCTCCACGACTTGT
AGAAAAACTATAATTGAGGAGACACCTCTGAAAGATATGGTTAAGAAATC
TAAAGCTGATATTAGTCCTATTTCACCGTTTGGAGATAAGAAAGCattca
attttcgAaaattcagaaGAACTTTCCGCCATTATAGTCCTGTTTCTAGA
GATTCAATTATCATTTGTACCACTCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:707543..711820 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1012-2490:2800 |
| Aaloc | 904-1008:2457 |
| Aaloc | 853-900:1748 |
| Aaloc | 718-849:1447 |
| Aaloc | 247-714:832 |
| Aaloc | 196-246:494 |
| Aaloc | 1-195:1 |
|
