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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:713362..716472+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012083 ID=XLOC_012083|Name=XLOC_012083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3111bp|location=Sequence derived from alignment at sc0000124_pilon:713362..716472+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCCAATATCAACCTCTATTCATCGGTatgtgcacgttttttttat
aaggacatgTAAAATTtcgccttcggatgtttttaagtttttgagtttta
agcctaaaaatgttcttagaatgttcttatttttaccattttgtaagtat
ttttgcccaatttcctgagaaatcgggtgttttagagtctgcaaagcctt
aaaatgttcttaacttcttctTAATATCTTTGGCATCGAAGCCGAATgct
cttatatggtttgttcttgtataaaaaacgtgtattcgtcTCTAGTTAGA
CTATTGTTTTCTGAAAGTTATTAGTATCGTAAACAGTATCGTATCGTATA
CAGTAAACCATGGTCCatgttttttcttcagtttAAAACTCTTGAGACCA
AAATATGGAAATTGAGTCACAAAATGCATAACAAAAATCACACAATATAT
ATGATTTATAACGCTGTGATTCAATCGATTCTTTCAATTTTGGAGGGGTT
TATAGATGTCTAGGTCATATTCGGAGCCTTATgactcatttttgaatttt
tggattCTGAAATCCTAAGGTTCTAAGTCTAACATTAAAACACTATCCTT
CCGACCTAAAAGTTAGACCTCTTACAATACGTTTGTGGTTATGAAAATGT
CTCTAATATTATGAAAAGgattgtaatttcattttttctaatgTTTCAGG
TACATCAAAGTCAATGATAATGAACTTCCAATAAAACAACTGAAGAGAgg
acaacaaaaacaacaagacAACACCATGAGGAAGAGCAAGAGAAACAAAA
TAATAGCGCTCTCCATCATTGTGATGTTATTGATCTACGTCTTTCTAGCT
GGTGCACCTCACCTCATGCACGACGAAGAAGAACCAATAAGACCATATGA
GGAAAGATATAGAGATTTGAAAATGAGCGCACTCCATGGGAGGGATGTAC
CAGTTGTCATTGTTGACCAACATCAAGAAGGTATCATAACGTGTTTTCGC
TTTGGTTTttggttccttcctcctggtgGTGTGATCCAAATGGTCTTTTA
AGAGGAGATAAGAGCCTATAGTGTTGCAGTGTCACCTgattatagaattt
ttttaaaaatgaagaaagtaaCAGGAATTTTGGATAGGCgtttataattt
tccattggTTAGCTTAAGTTACTATTCTTTCAAGTATGTGAATTTCTTGC
CTCCTCGTTGTAGACAAGAAAAGTACGATACTggcgaaattaaatttttc
tacacagttttcaaaaaactgtatatatatgaaaatctaaaaatttacaA
AGGCTTTGAGATCCTAAGACTTACATAACCGATCTCAGGTGAAAAACATG
TTCAATTGTTATAcccatcttttgtttttttcagtgATACCGTACTGGTA
CAAAGCTATTGTCGAAGGTTTGATTCAGGCCAAAGGAAATACTATTGTAA
GAGTTATTTGAGTATATACAGCGCTAGCGTAATTGCTAAAAAGTTCTTTA
GGAACCTAAAGGCACAACTAAGAAACTAACTAATAGTAATACAGCTTTAC
TTTAAAGCAATAATGACCAAAATCAATCTTTGAGTTTCAGTTGTGAACAA
ATAAGTTAAAACATTGCCTTCTTAATATTTCTTGGAAATAAGAAGGGTCA
GAGGGCTAGTCTGAGTACCAGATAAGGAGTTTTTTCGTTAGAGAATAAAA
GGAAACCTACTAGACGGCTTTTAATAAATCTTGCACTTTTTCGGACAGAT
TCACATCGATGCGCATTCGGACACAGCTTCACCTTCTTTACTCAACAAAC
TCAAATACTTCCAACACAACAAAGTTCGCTTGGAACGTGACTTTCTTCCA
CTGATGGAATCCAACGATCGATTCATTTTCTCGTCAATTTATGAAGGTAT
ATTTGTGTATGAGTGTATCCTTCTAAGCTTTGAAGATATTTATGATAGCA
ACAAAAACCATATGGTAAAATCGTATTACTTAATCCTGCATTTTGCTGGC
CTTTGGTATCTCAACATTAAAGTTccattcttttcaattttatgcTTCCT
TCTTCAAAGGTTTTGTGGATCGAGTCATATGGGTCAAACCTAGCTGGTTA
AAGAACAATCAAACGTACCACACGAAAGGTTTCGTAGGTACTACAAAAAT
CAAAGGTTTAAAGGGCGATGTAGCGTGTACTTGCGAACGCCCATTACGTA
ATGGCTACGTAGCGGGCGGTATGTATGATTGTATACGTGAGAACCCGTGG
AATGTTTTGAACGCAACAACCATCCCATTAACGGATTGTAAGAAACTTCG
GAATTTTGCCTTTATTGAGATTTCCGAATCGAATTTTATTGAAGATATTA
CTTTTAAGAAGACTTTAAGTGTGTTTGTTGACATAGATGAAGATTATTTT
GGTTGCGAAAGTGGCGTTGAAAATTTTATAGAACATGGTGTCTCATTAAA
AACGCAAAAGGTTTTAGATGCCATTCTACCTGAATTGTATTCGCCGAAGA
ATTCTGAAGATGAGACTGACCTTaaccaaaaattgaaagaaatgttTCAT
AAAATCTCTGACATGTTTTTGTATTTACACTTGAAGTCTGAACCAAAAGA
TACTCGAGCTGTCCGACAAAAACTTAATGATGCAATCACTTCAATGACCG
GGAAGTACTTTTTAAAACCGACAGCATTGCCGGAATTCGTCATTTTCTTA
TTGACTCTATCGCCGAAACAGATTGACAGTTTAtcgaaaatacatttttg
tttGTCATCAAGTCAACGGCTTTTAGGGAAGGACCAGCAAACGGAATTTT
CAGTTTGTCATGGTAACGTGTTTCCAAATAGTCGATTCGTGAAAGAATTT
CATATAGGAACCGAAGCAGATTTATATAAACGTGGTGAAAAACTTTCAGA
TATCTTACAGTATATAAGACAGACTGTACGCCCACGATTTTACACTATCG
CGCGATCTTTACGTGACGGATATGTCGTACGCGACCAACAACGAGAGATT
GAAAAGTTGGTTATGAGAGCAATCGATAAAGTTGAGCTTAATACTGGTCG
TAGACGGAAAACTATTTATGATCCTTTCTTATTGTTTGGTAGGAAAGGTT
GGATTTCTTGA Coding sequence (CDS) from alignment at sc0000124_pilon:713362..716472+ >XLOC_012083 ID=XLOC_012083|Name=XLOC_012083|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3144bp|location=Sequence derived from alignment at sc0000124_pilon:713362..716472+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTCCAATATCAACCTCTATTCATCGATGGCTCCAATATCAACCTCT
ATTCATCGGTACATCAAAGTCAATGATAATGAACTTCCAATAAAACAACT
GAAGAGAggacaacaaaaacaacaagacAACACCATGAGGAAGAGCAAGA
GAAACAAAATAATAGCGCTCTCCATCATTGTGATGTTATTGATCTACGTC
TTTCTAGCTGGTGCACCTCACCTCATGCACGACGAAGAAGAACCAATAAG
ACCATATGAGGAAAGATATAGAGATTTGAAAATGAGCGCACTCCATGGGA
GGGATGTACCAGTTGTCATTGTTGACCAACATCAAGAAGGTACATCAAAG
TCAATGATAATGAACTTCCAATAAAACAACTGAAGAGAggacaacaaaaa
caacaagacAACACCATGAGGAAGAGCAAGAGAAACAAAATAATAGCGCT
CTCCATCATTGTGATGTTATTGATCTACGTCTTTCTAGCTGGTGCACCTC
ACCTCATGCACGACGAAGAAGAACCAATAAGACCATATGAGGAAAGATAT
AGAGATTTGAAAATGAGCGCACTCCATGGGAGGGATGTACCAGTTGTCAT
TGTTGACCAACATCAAGAAGtgATACCGTACTGGTACAAAGCTATTGTCG
AAGGTTTGATTCAGGCCAAAGGAAATACTATTtgATACCGTACTGGTACA
AAGCTATTGTCGAAGGTTTGATTCAGGCCAAAGGAAATACTATTATTCAC
ATCGATGCGCATTCGGACACAGCTTCACCTTCTTTACTCAACAAACTCAA
ATACTTCCAACACAACAAAGTTCGCTTGGAACGTGACTTTCTTCCACTGA
TGGAATCCAACGATCGATTCATTTTCTCGTCAATTTATGAAGATTCACAT
CGATGCGCATTCGGACACAGCTTCACCTTCTTTACTCAACAAACTCAAAT
ACTTCCAACACAACAAAGTTCGCTTGGAACGTGACTTTCTTCCACTGATG
GAATCCAACGATCGATTCATTTTCTCGTCAATTTATGAAGGTTTTGTGGA
TCGAGTCATATGGGTCAAACCTAGCTGGTTAAAGAACAATCAAACGTACC
ACACGAAAGGTTTCGTAGGTACTACAAAAATCAAAGGTTTAAAGGGCGAT
GTAGCGTGTACTTGCGAACGCCCATTACGTAATGGCTACGTAGCGGGCGG
TATGTATGATTGTATACGTGAGAACCCGTGGAATGTTTTGAACGCAACAA
CCATCCCATTAACGGATTGTAAGAAACTTCGGAATTTTGCCTTTATTGAG
ATTTCCGAATCGAATTTTATTGAAGATATTACTTTTAAGAAGACTTTAAG
TGTGTTTGTTGACATAGATGAAGATTATTTTGGTTGCGAAAGTGGCGTTG
AAAATTTTATAGAACATGGTGTCTCATTAAAAACGCAAAAGGTTTTAGAT
GCCATTCTACCTGAATTGTATTCGCCGAAGAATTCTGAAGATGAGACTGA
CCTTaaccaaaaattgaaagaaatgttTCATAAAATCTCTGACATGTTTT
TGTATTTACACTTGAAGTCTGAACCAAAAGATACTCGAGCTGTCCGACAA
AAACTTAATGATGCAATCACTTCAATGACCGGGAAGTACTTTTTAAAACC
GACAGCATTGCCGGAATTCGTCATTTTCTTATTGACTCTATCGCCGAAAC
AGATTGACAGTTTAtcgaaaatacatttttgtttGTCATCAAGTCAACGG
CTTTTAGGGAAGGACCAGCAAACGGAATTTTCAGTTTGTCATGGTAACGT
GTTTCCAAATAGTCGATTCGTGAAAGAATTTCATATAGGAACCGAAGCAG
ATTTATATAAACGTGGTGAAAAACTTTCAGATATCTTACAGTATATAAGA
CAGACTGTACGCCCACGATTTTACACTATCGCGCGATCTTTACGTGACGG
ATATGTCGTACGCGACCAACAACGAGAGATTGAAAAGTTGGTTATGAGAG
CAATCGATAAAGTTGAGCTTAATACTGGTCGTAGACGGAAAACTATTTAT
GATCCTTTCTTATTGTTTGGTAGGAAAGGTTGGATTTCTTGAGTTTTGTG
GATCGAGTCATATGGGTCAAACCTAGCTGGTTAAAGAACAATCAAACGTA
CCACACGAAAGGTTTCGTAGGTACTACAAAAATCAAAGGTTTAAAGGGCG
ATGTAGCGTGTACTTGCGAACGCCCATTACGTAATGGCTACGTAGCGGGC
GGTATGTATGATTGTATACGTGAGAACCCGTGGAATGTTTTGAACGCAAC
AACCATCCCATTAACGGATTGTAAGAAACTTCGGAATTTTGCCTTTATTG
AGATTTCCGAATCGAATTTTATTGAAGATATTACTTTTAAGAAGACTTTA
AGTGTGTTTGTTGACATAGATGAAGATTATTTTGGTTGCGAAAGTGGCGT
TGAAAATTTTATAGAACATGGTGTCTCATTAAAAACGCAAAAGGTTTTAG
ATGCCATTCTACCTGAATTGTATTCGCCGAAGAATTCTGAAGATGAGACT
GACCTTaaccaaaaattgaaagaaatgttTCATAAAATCTCTGACATGTT
TTTGTATTTACACTTGAAGTCTGAACCAAAAGATACTCGAGCTGTCCGAC
AAAAACTTAATGATGCAATCACTTCAATGACCGGGAAGTACTTTTTAAAA
CCGACAGCATTGCCGGAATTCGTCATTTTCTTATTGACTCTATCGCCGAA
ACAGATTGACAGTTTAtcgaaaatacatttttgtttGTCATCAAGTCAAC
GGCTTTTAGGGAAGGACCAGCAAACGGAATTTTCAGTTTGTCATGGTAAC
GTGTTTCCAAATAGTCGATTCGTGAAAGAATTTCATATAGGAACCGAAGC
AGATTTATATAAACGTGGTGAAAAACTTTCAGATATCTTACAGTATATAA
GACAGACTGTACGCCCACGATTTTACACTATCGCGCGATCTTTACGTGAC
GGATATGTCGTACGCGACCAACAACGAGAGATTGAAAAGTTGGTTATGAG
AGCAATCGATAAAGTTGAGCTTAATACTGGTCGTAGACGGAAAACTATTT
ATGATCCTTTCTTATTGTTTGGTAGGAAAGGTTGGATTTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:713362..716472 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 523-1572:2062 |
| Aaloc | 373-519:1749 |
| Aaloc | 313-372:1387 |
| Aaloc | 31-309:701 |
| Aaloc | 1-27:1 |
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