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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000124_pilon:663338..666654- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012074 ID=XLOC_012074|Name=XLOC_012074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3317bp|location=Sequence derived from alignment at sc0000124_pilon:663338..666654- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATGAAAAGAAAAGAATTGGAATAGTTGGTTACGGCCATATAGGTGA
GTTTTTTCAAAATGTTTTTCCAGAAATAAAATCTTTGTTCTTTTTTTTCC
TTAAAATGTAATCATTATATTCTCCTCCTTAGTTGAACAACCTTCATCAG
AAGCCTTTGACCTTCAAGTGGCCGCTCATCACCTATGTATATCGGTCTCC
CCTGTAACCTTTAATTGATATATAAAAATGATTAATTCTAAATAAATTTT
ATAGGTTTTACTTTTAAAAGGCTTCTATAATTTTTCATTACTGTAAGGTC
AATACATTTTTGACGAAGTTCAAAAAAGTGAAAACTTGTGTGTTGACTTT
GTGTGGAATAGATCCTTTGACAAAATCAAACATCTTCCGAAAGAAGTTCA
ACTTGAAAATCTTGATGAATTTAGAACGAGGTGAAAATACTTTTCTTTCT
GATCTATCTATTATTTTTCGGAAGGATTAAATGAATCTTTCTAATCCTTT
AAACCCAGAGGAAACGAAATATGCTGTCAAAACCACTTAAAAATTGGCTA
AACTTTTTGATGGAAAACACTTTGAAACTATTGAAAAATATATTTTAGAA
ACCTTCTCATTCTTGTTTCATATTCTAATGTTTCTTCACTAGAAAGGTTG
ACATCATCTTAGAAGTTGCACATATCACAACAACTCAAAAATATGGAGAA
CAATTTTTAGAACATGCAAATTTTATGGTAAAATCTTCATTATTGTGAGC
TTTTTTGTTTAAGATGTGGAAGATCTTGAGCAATGTTTTAGTTTCAAAAA
CTCAAATCTTATAATGCCTGTCTGATTTCTTCTGGCAGTGAATGAAATTC
AATGCAATTGATTCAGAAAAAATATGTCAACAAGAAAAACCTTTCATTCA
CAAATTTGACAAATTCGCTTTCAACATGTCGAAAGATACATTGACTCTCG
GTATCTCTCTTTCATCAGATAGGATCACCTACTGCTTTGGCTGATGAGGA
TCTTGAAGCCAGACTGAGAAAGAAATCCTTAGAAACTGGTTATGGATTGT
TTGTTCCTGCTGGTGCATTTTGGGGTGGTGAAGATGTACAAAAGATGGCT
GATCAAGGGTCATTGAAGGTAATCTTATAGACAAAAATAAGTCTCTAAAA
AGATGAGACAATGTTTATTTCTATGAGGATGGATGAGCTTTTATAAAGAG
TAAAAAAAGAAGTTTGATTTGATTTGATACACTTATTTTGTATCCAAATT
CCTTTTATAAATCAAAGCAAAATGTATTTTCGATACGCCTTCCAACTTGG
TCGACTTTTTAGGGGACTTGTAATAAATTTATGAGGAAGATTTGTTCTCA
GTTAACGCCATTTTTTTAGGCCATATCTAAATCAAACCAACAAACTCCTG
CCAAGACTCAGTGATATTTTCCCAAGTCTCAAGTGGTGTGAAGTGCAAAC
TATTTTTAGCATTTGAATTGCTTAACTATATTGATGTTACTTTATCCCTT
CAATGCAAGGATATCTTACATTTTTCACAAGGGGACTCATACACTAATGT
TTTCAATACTGTTGTTTGGAAGAATCCTCCTCTCCTCTCCTGAAAAGCTG
ACCGCGCCCCTAAAGGTTGATAGGTGTATAGCGTTTAAGGGTTAATAAAT
TGATGTGCCTTTTTTAGAGTTGAGTTAAATCTTAACGTAATGTGTTTTCA
TTTCCAGGGTTTGAAAGTGACAATGAAAAAACATCCATCTTGTTTCAAAG
TCCTTGGCGAGGTAGCTGAAAGGAATGAAAAGGTTGGAGATGAACCTGTG
GTATTATACGAAGGTTAGATAGGTCTTTCTTTGGTTTTTCAAATTACATG
TTTTTATTACAACTGTCTCCACTTATAAGGTTTTCATCTTCTTCTCATGC
ACTATTCTATAATTTTCCCCATCATATTAGGTGATTTCACCTTGACAAAA
CTACTTATTTATCTAGACTAGCTTAATAATCCTGAACGTATTAATTCTAC
AGTGAAATTAACCAAATTTTGTACAATATTTTGCTTACAATTAGGTCCAG
TTCGAAAGCTTTGTCCGTTGGCACCTGCTAATGTAAACACGATGGCTTGT
GCTGCACTAGCCGCACATAATCTAGGTTTTGATAAAGTTCAAGGATGTCT
TGTAGCTGATCGAAGGTATACAGATCTTGAACGTGGATATCCAAGCTGTA
AATTACTTTCTTACTTTGATGATTCTGCTATTTACAGCTTGGCCTAGCTA
GATGCTTTTCAAACCCATTCTGAGATATTCTGCCCCTTCTGATATATTAT
CGAGTTTATGTATTCGAGATCATCATCATCATCCTTCGACCTAGGTCCGA
ATGGTCCACTAGGTCCACTTTATTCGAGATAAATCTAGGGGGACGGTATG
AAGCAAAGTTGACATGTCTCCAAAATCACCGTCCACTTTGCTCGACGACA
GTAAAAACACCAAGATACCGTCGTCTATTTAGGTGAGCAAAGGCGATATA
GAGTTAAATAATAGAGTTTGCAGCCTGGATATCAAGGCTAAACAGATCAT
GAACGTGATTCGAATAAATACAATTGAATTGAGGTTTTTTGACCATTGTC
TATGTTATGAAAATGAAGAATGAGACAAGATTTATTTTTCGAAATTAAAA
ACAATCATCAGCAAAATAAAATTATTGATCATAAATTTAGTGATAATTGT
TCCAGTGTTTTTTTTCAGTTTGAAATGCCACATAGTAGAGATAGAAGTGA
CAGGACCTCCTTTAGGTGATAATGGTGAAGAATTCACAGTCAAAACAGTT
CGAACAAATCCCAGCAAAACTGGAGTTGTTACTGGTAACGCTACTTATGC
ATCCTTCTTCCAAAGTCTAAGGCGTAAGTCTTTTTTTCCAAACTATTTAT
GTTCAATACAAAACCAATACAGCTTATCTCGCCAATTCGAACTCAAATGG
GAACTTTAGTTTGTTCGAGTTAAAGAGAGATTCGAATTATAGAAAGTATT
TTTACGAGAACTGAGAATTAGTTTGAATTGAGAACGATTCAAATAATAGA
AGTTCAACTTAGCGAAAACCTGCTTTGTTATTTTTTGGTGTGTGTTTTTT
TTTGGGGGTTTTGTATCCAAGTTTAGGTCTAAGTATTATCACATTATTGT
CGTTTTTTTTAAAGTCTGGTTGGTGGTTTAACAAAATCTTCCAGGGAAAA
TTTTTCTTGAAAAGTTCAACAAAATCTTTGTGGGGAAATTGTTTTTGAAA
GTTACAATACTTTATGACTTTCTTTTTAGGTGCATATGGAAAAGGTGGCG
GTATCCATTTATGCTGA Coding sequence (CDS) from alignment at sc0000124_pilon:663338..666654- >XLOC_012074 ID=XLOC_012074|Name=XLOC_012074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1668bp|location=Sequence derived from alignment at sc0000124_pilon:663338..666654- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATGAAAAGAAAAGAATTGGAATAGTTGGTTACGGCCATATAGATGC
ATGAAAAGAAAAGAATTGGAATAGTTGGTTACGGCCATATAGGTCAATAC
ATTTTTGACGAAGTTCAAAAAAGTGAAAACTTGTGTGTTGACTTTGTGTG
GAATAGATCCTTTGACAAAATCAAACATCTTCCGAAAGAAGTTCAACTTG
AAAATCTTGATGAATTTAGAACGAGGTCAATACATTTTTGACGAAGTTCA
AAAAAGTGAAAACTTGTGTGTTGACTTTGTGTGGAATAGATCCTTTGACA
AAATCAAACATCTTCCGAAAGAAGTTCAACTTGAAAATCTTGATGAATTT
AGAACGAGAAAGGTTGACATCATCTTAGAAGTTGCACATATCACAACAAC
TCAAAAATATGGAGAACAATTTTTAGAACATGCAAATTTTATGAAAGGTT
GACATCATCTTAGAAGTTGCACATATCACAACAACTCAAAAATATGGAGA
ACAATTTTTAGAACATGCAAATTTTATGATAGGATCACCTACTGCTTTGG
CTGATGAGGATCTTGAAGCCAGACTGAGAAAGAAATCCTTAGAAACTGGT
TATGGATTGTTTGTTCCTGCTGGTGCATTTTGGGGTGGTGAAGATGTACA
AAAGATGGCTGATCAAGGGTCATTGAAGATAGGATCACCTACTGCTTTGG
CTGATGAGGATCTTGAAGCCAGACTGAGAAAGAAATCCTTAGAAACTGGT
TATGGATTGTTTGTTCCTGCTGGTGCATTTTGGGGTGGTGAAGATGTACA
AAAGATGGCTGATCAAGGGTCATTGAAGGGTTTGAAAGTGACAATGAAAA
AACATCCATCTTGTTTCAAAGTCCTTGGCGAGGTAGCTGAAAGGAATGAA
AAGGTTGGAGATGAACCTGTGGTATTATACGAAGGGTTTGAAAGTGACAA
TGAAAAAACATCCATCTTGTTTCAAAGTCCTTGGCGAGGTAGCTGAAAGG
AATGAAAAGGTTGGAGATGAACCTGTGGTATTATACGAAGGTCCAGTTCG
AAAGCTTTGTCCGTTGGCACCTGCTAATGTAAACACGATGGCTTGTGCTG
CACTAGCCGCACATAATCTAGGTTTTGATAAAGTTCAAGGATGTCTTGTA
GCTGATCGAAGGTCCAGTTCGAAAGCTTTGTCCGTTGGCACCTGCTAATG
TAAACACGATGGCTTGTGCTGCACTAGCCGCACATAATCTAGGTTTTGAT
AAAGTTCAAGGATGTCTTGTAGCTGATCGAAGTTTGAAATGCCACATAGT
AGAGATAGAAGTGACAGGACCTCCTTTAGGTGATAATGGTGAAGAATTCA
CAGTCAAAACAGTTCGAACAAATCCCAGCAAAACTGGAGTTGTTACTGGT
AACGCTACTTATGCATCCTTCTTCCAAAGTCTAAGGCTTTGAAATGCCAC
ATAGTAGAGATAGAAGTGACAGGACCTCCTTTAGGTGATAATGGTGAAGA
ATTCACAGTCAAAACAGTTCGAACAAATCCCAGCAAAACTGGAGTTGTTA
CTGGTAACGCTACTTATGCATCCTTCTTCCAAAGTCTAAGGCGTGCATAT
GGAAAAGGTGGCGGTATCCATTTATGCTGAGTGCATATGGAAAAGGTGGC
GGTATCCATTTATGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124_pilon | genome | sc0000124_pilon:663338..666654 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 799-834:37 |
| Aaloc | 643-795:599 |
| Aaloc | 523-639:1272 |
| Aaloc | 415-519:1611 |
| Aaloc | 265-414:2350 |
| Aaloc | 181-264:2675 |
| Aaloc | 49-177:3019 |
| Aaloc | 1-45:3318 |
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