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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000448_pilon:113779..115992- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012043 ID=XLOC_012043|Name=XLOC_012043|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2214bp|location=Sequence derived from alignment at sc0000448_pilon:113779..115992- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAACCAACCAGGAGAAGTTTTGGACGATGAACTGCCAAGATCTTC
CCAAACTATTGAAGGAACACCTGGCAGAAACCAAAACAACAACAACAATA
ACAACCGGCGCCGGATGAAATGGACGAAAGAAATGAATGTACACATTGTC
CGGAGCTATTTCATCGCCATCAAAACAACTCCAACAACATACAGAAGAAC
CCTCCATAACCTTTTTATTCAGAGGTATGGAGAGAACTTCAGCGAGCAAC
GCATTTGCGACCAAAAGCGACAGATTTTCGTCAAGGCAGAAAATCAACAA
AACCAACGACTTCGAGGCAACTGGCCGACGAACCGCGAGATAGACACCAT
CAGACAAGAGGTTGACCAAGAGCACAACCAAGAGCGGCAAGTTGACGAAG
GAGAACATGTTCAAAACGAAAATCCGCCCGAGATTATCCGAGAACCCGAA
GAACCAGCCAACACACCTCTAGAGCCACCATCAGCTGAAAACAACATTCT
ACCGGCAGGAAACGAGGCCCAACAAGTACAGGAAGGAGTTATGATTCAGA
GGGATGAAGAGGAGAATCTTCGAGCGAGGTTTGAGGAACATTATTTTATA
TCTAAACTAACTCCTTTCGAAAAAAGGGAAAAATTTCGGAAACCTTCAAA
AATAGATATCAAAAAACTTTCACGAAGCTGTGATATTGTTAACGAAACAA
TTGACGTCAATCAATACCAATGCAACGACATCACGCAAATCAACGATATG
ACGTATGCATTTGCCATCACAGCTATCGAACACTCAAATCTGCGAAAAAA
GTGTATCGTTTCCGACAAAATCACGATAAAGAAAACACACAATTGGATCA
AACGAATCAACGCAACGATTCTTGAACTTCGCAAGGAAATCAGCCAAATC
GATCAAATGAACATTGCCAATCCGTCACCTAAAATGCGACGAAACAATGA
ACGAATTAAACGAAAATTCACCATTACGAACGATCGAGAACGTAAATTAA
CTTGTGAACGTCTCAAACAAAAACTCCTTGCAAAAAACAACCGTCTGAAA
CGATACAAAGAGCGATCAAACCAGTTTAATCAAAACAGAGAATTTGTCAA
CAGCCCCGACAAATTCTACAAAAAACTTAGAGGATGCGCAATACCGATCA
CCAAAGCACCTTCTAAACAAGAGATCGAAGACTTCTGGAGACCAATTCTT
GGTACGGAGTCGAATTTCAACAACAACGCCCCGTGGATTGCCGATTACGA
AGCGACAATCGACATACAACCGTATGAATTCCAACCAATAACAAAAGAAG
AAATGGCAGAGGCAATGAAGAACTTTGCGAACTGGAAAAGCCCCGGCATT
GACTGTCTACAGAACTATTGGTGGAACAAATTCGAGTCAATCCACGATCA
CAAGGTCCAGATATACAACCGTTTGATGGATGATCCCCAATCCATCCCTC
CCTGGTTCACTTCCGGCAGGACAACACTCATACCAAAGAAACCTCAAACT
GAAATTCCGTCCAACTACCGCCCCATCACATGTCTTCCCATCACATACAA
AATCATGACCAGCATCATCACGAAACGTATGAAAACCCACCTAACTACAT
TCGACCTAATTCCCGAAGAACAAAAGGGTGGGATCTCAGGTAACCAAGGG
ACAGTAGACCAACTCTTAATCGACAACATGATCCTGGAGAATGCAAGAAA
ATCAAAACGCAACCTATCGACAGCCTGGATTGATTATCGAAAAGCTTTTG
ATTCTGTCCCGCATGACTGGCTAAAAAGATCTCTCCAGATACACAAATTT
CCTGAGAAACTCATCAACTTCTTCACCACCACAATGACCAAATGGAAGAC
CACCCTCAACATCTCAACGCAAGACACTACCGTATCTTCCGATCCGATCA
ACATCCACAACGGTATCTTCCAAGGTGATTGTCCTTCTGGGTTAAACTTT
GTCATAAGCCTGTTACCTTTATCGTGGCTCATCAAAAGATCGTCGATCGG
CTACGCTATAGGCCCCAGAAACAACCGTACCGTAGTCAGTCATCTTCTAT
TCATGGACGACCTAAAGCTCTATGCGAACTGCGATGAACGACTTCAAGAC
CTTCTCCAAATTGTATCCATGTTCAGCAATGATATTTGTATGAGTTTCGG
TTTGGATAAATGTAATACATTGTCGATAAGAGGAGGAAAGCTGACAAAAG
GGAATGACATCACC Coding sequence (CDS) from alignment at sc0000448_pilon:113779..115992- >XLOC_012043 ID=XLOC_012043|Name=XLOC_012043|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4428bp|location=Sequence derived from alignment at sc0000448_pilon:113779..115992- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAACCAACCAGGAGAAGTTTTGGACGATGAACTGCCAAGATCTTC
CCAAACTATTGAAGGAACACCTGGCAGAAACCAAAACAACAACAACAATA
ACAACCGGCGCCGGATGAAATGGACGAAAGAAATGAATGTACACATTGTC
CGGAGCTATTTCATCGCCATCAAAACAACTCCAACAACATACAGAAGAAC
CCTCCATAACCTTTTTATTCAGAGGTATGGAGAGAACTTCAGCGAGCAAC
GCATTTGCGACCAAAAGCGACAGATTTTCGTCAAGGCAGAAAATCAACAA
AACCAACGACTTCGAGGCAACTGGCCGACGAACCGCGAGATAGACACCAT
CAGACAAGAGGTTGACCAAGAGCACAACCAAGAGCGGCAAGTTGACGAAG
GAGAACATGTTCAAAACGAAAATCCGCCCGAGATTATCCGAGAACCCGAA
GAACCAGCCAACACACCTCTAGAGCCACCATCAGCTGAAAACAACATTCT
ACCGGCAGGAAACGAGGCCCAACAAGTACAGGAAGGAGTTATGATTCAGA
GGGATGAAGAGGAGAATCTTCGAGCGAGGTTTGAGGAACATTATTTTATA
TCTAAACTAACTCCTTTCGAAAAAAGGGAAAAATTTCGGAAACCTTCAAA
AATAGATATCAAAAAACTTTCACGAAGCTGTGATATTGTTAACGAAACAA
TTGACGTCAATCAATACCAATGCAACGACATCACGCAAATCAACGATATG
ACGTATGCATTTGCCATCACAGCTATCGAACACTCAAATCTGCGAAAAAA
GTGTATCGTTTCCGACAAAATCACGATAAAGAAAACACACAATTGGATCA
AACGAATCAACGCAACGATTCTTGAACTTCGCAAGGAAATCAGCCAAATC
GATCAAATGAACATTGCCAATCCGTCACCTAAAATGCGACGAAACAATGA
ACGAATTAAACGAAAATTCACCATTACGAACGATCGAGAACGTAAATTAA
CTTGTGAACGTCTCAAACAAAAACTCCTTGCAAAAAACAACCGTCTGAAA
CGATACAAAGAGCGATCAAACCAGTTTAATCAAAACAGAGAATTTGTCAA
CAGCCCCGACAAATTCTACAAAAAACTTAGAGGATGCGCAATACCGATCA
CCAAAGCACCTTCTAAACAAGAGATCGAAGACTTCTGGAGACCAATTCTT
GGTACGGAGTCGAATTTCAACAACAACGCCCCGTGGATTGCCGATTACGA
AGCGACAATCGACATACAACCGTATGAATTCCAACCAATAACAAAAGAAG
AAATGGCAGAGGCAATGAAGAACTTTGCGAACTGGAAAAGCCCCGGCATT
GACTGTCTACAGAACTATTGGTGGAACAAATTCGAGTCAATCCACGATCA
CAAGGTCCAGATATACAACCGTTTGATGGATGATCCCCAATCCATCCCTC
CCTGGTTCACTTCCGGCAGGACAACACTCATACCAAAGAAACCTCAAACT
GAAATTCCGTCCAACTACCGCCCCATCACATGTCTTCCCATCACATACAA
AATCATGACCAGCATCATCACGAAACGTATGAAAACCCACCTAACTACAT
TCGACCTAATTCCCGAAGAACAAAAGGGTGGGATCTCAGGTAACCAAGGG
ACAGTAGACCAACTCTTAATCGACAACATGATCCTGGAGAATGCAAGAAA
ATCAAAACGCAACCTATCGACAGCCTGGATTGATTATCGAAAAGCTTTTG
ATTCTGTCCCGCATGACTGGCTAAAAAGATCTCTCCAGATACACAAATTT
CCTGAGAAACTCATCAACTTCTTCACCACCACAATGACCAAATGGAAGAC
CACCCTCAACATCTCAACGCAAGACACTACCGTATCTTCCGATCCGATCA
ACATCCACAACGGTATCTTCCAAGGTGATTGTCCTTCTGGGTTAAACTTT
GTCATAAGCCTGTTACCTTTATCGTGGCTCATCAAAAGATCGTCGATCGG
CTACGCTATAGGCCCCAGAAACAACCGTACCGTAGTCAGTCATCTTCTAT
TCATGGACGACCTAAAGCTCTATGCGAACTGCGATGAACGACTTCAAGAC
CTTCTCCAAATTGTATCCATGTTCAGCAATGATATTTGTATGAGTTTCGG
TTTGGATAAATGTAATACATTGTCGATAAGAGGAGGAAAGCTGACAAAAG
GGAATGACATCACCATGGAAAACCAACCAGGAGAAGTTTTGGACGATGAA
CTGCCAAGATCTTCCCAAACTATTGAAGGAACACCTGGCAGAAACCAAAA
CAACAACAACAATAACAACCGGCGCCGGATGAAATGGACGAAAGAAATGA
ATGTACACATTGTCCGGAGCTATTTCATCGCCATCAAAACAACTCCAACA
ACATACAGAAGAACCCTCCATAACCTTTTTATTCAGAGGTATGGAGAGAA
CTTCAGCGAGCAACGCATTTGCGACCAAAAGCGACAGATTTTCGTCAAGG
CAGAAAATCAACAAAACCAACGACTTCGAGGCAACTGGCCGACGAACCGC
GAGATAGACACCATCAGACAAGAGGTTGACCAAGAGCACAACCAAGAGCG
GCAAGTTGACGAAGGAGAACATGTTCAAAACGAAAATCCGCCCGAGATTA
TCCGAGAACCCGAAGAACCAGCCAACACACCTCTAGAGCCACCATCAGCT
GAAAACAACATTCTACCGGCAGGAAACGAGGCCCAACAAGTACAGGAAGG
AGTTATGATTCAGAGGGATGAAGAGGAGAATCTTCGAGCGAGGTTTGAGG
AACATTATTTTATATCTAAACTAACTCCTTTCGAAAAAAGGGAAAAATTT
CGGAAACCTTCAAAAATAGATATCAAAAAACTTTCACGAAGCTGTGATAT
TGTTAACGAAACAATTGACGTCAATCAATACCAATGCAACGACATCACGC
AAATCAACGATATGACGTATGCATTTGCCATCACAGCTATCGAACACTCA
AATCTGCGAAAAAAGTGTATCGTTTCCGACAAAATCACGATAAAGAAAAC
ACACAATTGGATCAAACGAATCAACGCAACGATTCTTGAACTTCGCAAGG
AAATCAGCCAAATCGATCAAATGAACATTGCCAATCCGTCACCTAAAATG
CGACGAAACAATGAACGAATTAAACGAAAATTCACCATTACGAACGATCG
AGAACGTAAATTAACTTGTGAACGTCTCAAACAAAAACTCCTTGCAAAAA
ACAACCGTCTGAAACGATACAAAGAGCGATCAAACCAGTTTAATCAAAAC
AGAGAATTTGTCAACAGCCCCGACAAATTCTACAAAAAACTTAGAGGATG
CGCAATACCGATCACCAAAGCACCTTCTAAACAAGAGATCGAAGACTTCT
GGAGACCAATTCTTGGTACGGAGTCGAATTTCAACAACAACGCCCCGTGG
ATTGCCGATTACGAAGCGACAATCGACATACAACCGTATGAATTCCAACC
AATAACAAAAGAAGAAATGGCAGAGGCAATGAAGAACTTTGCGAACTGGA
AAAGCCCCGGCATTGACTGTCTACAGAACTATTGGTGGAACAAATTCGAG
TCAATCCACGATCACAAGGTCCAGATATACAACCGTTTGATGGATGATCC
CCAATCCATCCCTCCCTGGTTCACTTCCGGCAGGACAACACTCATACCAA
AGAAACCTCAAACTGAAATTCCGTCCAACTACCGCCCCATCACATGTCTT
CCCATCACATACAAAATCATGACCAGCATCATCACGAAACGTATGAAAAC
CCACCTAACTACATTCGACCTAATTCCCGAAGAACAAAAGGGTGGGATCT
CAGGTAACCAAGGGACAGTAGACCAACTCTTAATCGACAACATGATCCTG
GAGAATGCAAGAAAATCAAAACGCAACCTATCGACAGCCTGGATTGATTA
TCGAAAAGCTTTTGATTCTGTCCCGCATGACTGGCTAAAAAGATCTCTCC
AGATACACAAATTTCCTGAGAAACTCATCAACTTCTTCACCACCACAATG
ACCAAATGGAAGACCACCCTCAACATCTCAACGCAAGACACTACCGTATC
TTCCGATCCGATCAACATCCACAACGGTATCTTCCAAGGTGATTGTCCTT
CTGGGTTAAACTTTGTCATAAGCCTGTTACCTTTATCGTGGCTCATCAAA
AGATCGTCGATCGGCTACGCTATAGGCCCCAGAAACAACCGTACCGTAGT
CAGTCATCTTCTATTCATGGACGACCTAAAGCTCTATGCGAACTGCGATG
AACGACTTCAAGACCTTCTCCAAATTGTATCCATGTTCAGCAATGATATT
TGTATGAGTTTCGGTTTGGATAAATGTAATACATTGTCGATAAGAGGAGG
AAAGCTGACAAAAGGGAATGACATCACC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000448_pilon | genome | sc0000448_pilon:113779..115992 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2214:2215 |
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