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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000448_pilon:2741..7732- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_012026 ID=XLOC_012026|Name=XLOC_012026|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4992bp|location=Sequence derived from alignment at sc0000448_pilon:2741..7732- (Clytia hemisphaerica_ch_hm2_pilon)
GATGTGATGCCGACTTCTGATGCCAACACACATCAAAGCATTAGAGAAAT
CACTAATGCCACATCACAGTAAGTATTCCTCAAATAGTGATCGAGGTAAT
CGGACCACTTTGTTTGACATTCCATGGGCGGATTGGCGGCCGCCCACTGC
AAATAAATGGGCGGCCTATCTAAACGTCAATCCTCAATCCAAGTTGTAAT
ATTTCAAAAAAAGGTTGACTCCCCAAGTGGTCGATTTTTTTTTCGGTGGG
GGCGCCTTTGATTATAAATTTTGGCACCTCTTAGCTATTTCTAACCAAAA
AGAGAAAAGGTAAGTTAGCGTAATTTATACAAAAATAAATAGAGCGAGGG
GGTCCCAACTTCCAAAATATGCCTTCCAAGTTTGCCCTAATTTTGGTCGA
CCCTCTGGATAGTAGGAAATCGATACATCTTTGATTTGCTTTTATTTCTA
TTTAGGGTTTGTGGTACTGAATGTTATCGTGCAACGTCTTGCTGGAGCTT
TTTGCTTTTTCGCCACAAAACAGCACCGACTTGCACTCTAATTGATGGAT
CGATCGATCGAAGACACATGACCAAAAATTCAACCGTCGACTATTATGAA
GTCTGGGTAAGTTAAATCCCCAACTGGGACGTCCCCATTGAGGTTTGAAA
AGTGGAGCCTGTCAGATATGAATAATTGGTAAATTTGAGACCCTGTCAGA
ACGAAAAATTTTTACATTTTCATCCTGAAAATTGGCTATAAATAGAAACA
AAAAAAGTAAACATTTTTACAGTTTCCACCCTAAAAAAATATCCATGATA
TCCAAAAAATCAACTCTGTCTGAAAATTAGTAAACTTGGGACCCTGTCAG
ACATTTTCTAACGGCAAATTCGGCTCTTCGTTTTTTCAAAAAATGGAGAA
TTTTTAATAAAATTACAAAAAATGGAAAAAACAACCAAATTTCGACAAAA
ACTGGCATCACCTGACAAGAACCTGACCCTTGATGAAGATGAGATTGACA
ACAACCGTTGTACGGAGCATAATTGCATTAAAGATAATGAAAAAATGAAG
ATTCAATGCCATAAATGTCAAAGAATGCTACATTATGCCTGCACTGGACT
ACCATCATACCAGCTGAATATGTTTTTGAATAAAGGTTACAGAAAATACC
AATGCATAACTTGTTGTTCTCCGGCAAAAGACCTCAGCATAAAAATCCAT
CATCAAGCAGAAAGAATAGAATGCTGTACACACAGCTATAAAAAAATTGA
TGCATGTGAAACCATAATACACCATAAAAGTGAGAATGAAAAGAGACTTA
ACACCGTGGTCAAGGACTTAAAGGCAAAATGTCAGGAATACCTAAAAGAC
AAAAATCAAGTAACTGATCTAATCCAGAGCCAATTTTCCGTTCTGGAAAA
GAAGCTATCCACCAAAATTGAAGAGACAGTGAATGCTAAGATTTCGAAAG
TTCAAGTGGCTAAAGAACCAAAAAGTTTTGCCGACGCTGCTAAAGTAAAT
AGTTCGTTGAACCTAAACAACATGAAGCAGTTACTCAGAAGGGAGAAAGT
CGAAGAACAAATCGAAGACTAAAGAAAGCTGTCAATAGACGCAAACATCA
TCATCCACGGGGTGCGTGAAAAAGAAAATGAAGAAGATATCGATTTCGTA
AACGAACTTTTGAACGACGTCAACGTAAAAACTCAACCAACCTTCGTCTC
TCGAGTTGGAAAACAATCAAATGGTGTGCGTCCAATCATAGTCGCCTTCA
AAGACAGCCATGTAAAGTACCGCTTCATGAAGAAGTTGACTGAACTAAGA
CAGCACGAGAAGTACGTAAAATTGAGCATCACCGACGATTTAACGAAAAT
GGAGAGAGAGCAAATCAAAGAATGGAAAAGAAGAGCAGACGAGATGAATA
AAGCCAAGTCGAATGAAGATTTTAATTGGAGGGTGCGGGGAAGTCCTCGT
GACAAACTGTACCTAAAAAAGATTTTTGTACAAGATCGGTTTAGAGGCCC
TCGTGTACCTAGACTGTAATTCTTTAATAAATAAATAAATAAATAAATAA
ATAAATTCCCGTACCCAATTTTGCCTAAGTGTTGCCTTGGGTGTCTGTGT
ACTAAATCATAACACAGATTCTTATACTTGTCATTGCATCTTATTCTAAT
ACTTTCATTTTTTACAGAATCAATGTTCTTCAAACGATACCATCTGTAAC
TTGGGTGTTTGTTTACCAAATTATGTGACAGATTCATTCACTTGCCATTG
CCCATCTTCATACACTGGTGCAAATTGTGAAACAGAAATATCCCAACCGA
CAACACCAACACCAACAACCACCGATGCACCAACACCAACAACCACCGAT
GCACCACCAACAACAACAACCACCGAAGCTGTCGTCACCGAAACAGCTAC
TACCACCGAAAATGTTCCACCAATTTCAGGTAAAACCTGACCCAATATAA
TTTTCAGCGGAGACAAAAAGGGCTGTAATATGGAAAAATACTTTATAAAC
TTTCGCGGGAATTAAATTTCGCGGTTGGGCCTATCCGCGAAATTCAAAAG
TTTCGCGGGGACTTAATTCTGCGCGTGGCACTATTAAGTGGGAATATTTT
CACGATTTTGTGACTTTTACTTTCAAATCATGCATGTTGGTTGTTGAAAT
TATTTGCGCCTCTTTGATGCAAGTAGCACTTCAAATAATATTTATTTGAC
ATATTTTGAGTTTTGTTTAGAAATATTTCGTAGATGAGGGCCTTCCAAAT
TTCCATTATGACTTAATTTCGCGGATTTTCGCAGATGACACCCAAATTCA
AGAGATCCGCGAAATTTAATCCCCACGAAAGTTTATCCCATTAAAGTATA
TCAAAGAAATTTATTCCATCGAAAGATATAGTCCAAATTTTATTTCACTG
ATTGACTTCAACAAAAACATTATAATCTAAAGTCGATAAACCCCATTCAA
AATGAAATATCCGATTACATTTAACAGATTAGCAATATCGACTTTTTTTC
CCGAACGTCAAATTTCTTAGAACGAGGAAATAACCAAAAGTCTCAATATA
TTTCGAGGGAGATTGCTTTAACCTTAGTTTCCTTACTGAACAGAAAAAGC
CTCCCCGAATAGGTTTTAAGTTTTAAGATTAAAGCAACATATTTTTTTTC
ATCAAATATTTCATGTTTACCCTTTTACCCCTTTTGAGTTTCCTTCGAAA
GTGGAGGCCTGGTAACGAAAATGAATGTATGAAAAAAATATGAGAACATG
AAAAGTGGAGGCCTGGTAACGAAAATTAATGTATGAAAAAAATATGAGAA
CATGAAAAGTGGAGGCCTGGTAACGAAAATTAATGTATGAAAAAAATATG
AGAACATGAAAAGTGGAGGCCTGGTAACGAAAATGAATGTATGAAAAAAA
TATGAGAACATGAAAAGTGGAGGCCTGGTAACTAAAATGAATGTATGAAA
AAAATATGAGAAAATGAAAAGTGGAAGCCTGGTAACGAAAATGAATGTAT
GAAAAAAATATGAGAACATGAAAAGTGGAGGCCTGGTAACTAAAATGAAT
GTATGAAAAAAGTATGAGAAAATGAAAAGTGGAAGCCTGGTAACGAAAAT
GAATGTATGAAAAAAATATGAGAAAATGAAAAGTGGAGGCCTGGTAACTA
AAATGAATGTATGAAAAAAGTATGAGAAAATGAAAAGTGGAAGCCTGGTA
ACGAAAATGAATGTATGAAAAAAATATGAGAAAATGAAAAGTGGAGGCCT
GGTAACGAAAATGAATGTATGAAAAAAATATGAGAACATGAAAAGTGGAG
GCCTGGTAACGAAAATGAATGTATGAAAAAAATATGAGAACATGAAAAGT
GGAAGCCTGGTAACGAAAATGAATGTATGAAAAAAATATGAGAAAATGAA
AAGTGGAGGCCTGGTAACGAAAATGAATGTATGAAAAAAATATGAGAACA
AGAAAAGTGGAGGCCTGGTAACGAAAATGAATGTATGAAAAAAATATGAG
AACATGAAAAGTGGAGGCCTGGTAACTAAAATGAATGTATGAAAAAAATA
TGTGAACATGAAAAGTGGAGGCCTGGTAACGAAAATTAATGTATGAAAAA
AGTATGAGAAAATGAAAAGGTAATGAAACAGGATGTGGTGCATGATAGCT
GATAGCTCGGTGGACACTCAAGGTAAATGACCTACCGTACGTGCCCAGCC
CTTAAGGGCCCTTAAGGCTTTCCAAAGTGAACTGAAAAAGTAAAAATGAG
CAAAGACGAGAAAAAGTGCCCTCTAAGAGTGTAAAAATTGCAAAATCTAA
CCATATTTGCCTTAAAAAGGTCAAAAAAATTCAAAAAAATGCACCGCAAA
GGTAAATTGATACCCAAATTTGTTCAAATTTAGTTTAATTTTCTCTTCAC
TGCAAAGGTTTGATATTTGGGCCGCATATGTGGTCATTTTGAAATCGAGT
GCCTCCCCCTGGAATTAAACTAAATACAAAAATACAATCTGTGTTGTGCT
CTTTTAGGATGGCAATTCACAAGTAATGCACCCGTTGTACTCTTCACTTA
TCCATTATTACCAACCACATGGTCTTTCAAAGTGCATTTCACCTTCCAGA
CCCCCGAAAAGAGAGTCAGTTTTTTCCAAATCAATTACAATAACCAGGGT
GAAGGGCTATTTTCCTTGGTGCTTGCTGGAGCTGGTAGAGAAGTAGCATT
TCAGAGTGGGGGTGGTTTTGATTATATCAAAGTTGGCGGTGATCGTTTTG
CGCCAGTTGCTGGATCCTTCTACTCGGTGGTTTGTACGTGTATCCTTAAC
GGTCCAAGATCAATTATCCAATACACGTTCAAAGATGACAATGACGTAAG
TATTCAACAGAGCGATGATTTCACACTTACGCATCCATGTAATTTGAATG
ACGTCACTTTCCATAATGGTAACGATGCAGATCATCACCATTCCGGAAGC
GGTTTCAACGGGAAAATGTGGACAAGTGGAATCCATTATTGA Coding sequence (CDS) from alignment at sc0000448_pilon:2741..7732- >XLOC_012026 ID=XLOC_012026|Name=XLOC_012026|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1932bp|location=Sequence derived from alignment at sc0000448_pilon:2741..7732- (Clytia hemisphaerica_ch_hm2_pilon)
GATGTGATGCCGACTTCTGATGCCAACACACATCAAAGCATTAGAGAAAT
CACTAATGCCACATCACAGATGTGATGCCGACTTCTGATGCCAACACACA
TCAAAGCATTAGAGAAATCACTAATGCCACATCACAGGTTTGTGGTACTG
AATGTTATCGTGCAACGTCTTGCTGGAGCTTTTTGCTTTTTCGCCACAAA
ACAGCACCGACTTGCACTCTAATTGATGGATCGATCGATCGAAGACACAT
GACCAAAAATTCAACCGTCGACTATTATGAAGTCTGGGGTTTGTGGTACT
GAATGTTATCGTGCAACGTCTTGCTGGAGCTTTTTGCTTTTTCGCCACAA
AACAGCACCGACTTGCACTCTAATTGATGGATCGATCGATCGAAGACACA
TGACCAAAAATTCAACCGTCGACTATTATGAAGTCTGGAATCAATGTTCT
TCAAACGATACCATCTGTAACTTGGGTGTTTGTTTACCAAATTATGTGAC
AGATTCATTCACTTGCCATTGCCCATCTTCATACACTGGTGCAAATTGTG
AAACAGAAATATCCCAACCGACAACACCAACACCAACAACCACCGATGCA
CCAACACCAACAACCACCGATGCACCACCAACAACAACAACCACCGAAGC
TGTCGTCACCGAAACAGCTACTACCACCGAAAATGTTCCACCAATTTCAG
AATCAATGTTCTTCAAACGATACCATCTGTAACTTGGGTGTTTGTTTACC
AAATTATGTGACAGATTCATTCACTTGCCATTGCCCATCTTCATACACTG
GTGCAAATTGTGAAACAGAAATATCCCAACCGACAACACCAACACCAACA
ACCACCGATGCACCAACACCAACAACCACCGATGCACCACCAACAACAAC
AACCACCGAAGCTGTCGTCACCGAAACAGCTACTACCACCGAAAATGTTC
CACCAATTTCAGGATGGCAATTCACAAGTAATGCACCCGTTGTACTCTTC
ACTTATCCATTATTACCAACCACATGGTCTTTCAAAGTGCATTTCACCTT
CCAGACCCCCGAAAAGAGAGTCAGTTTTTTCCAAATCAATTACAATAACC
AGGGTGAAGGGCTATTTTCCTTGGTGCTTGCTGGAGCTGGTAGAGAAGTA
GCATTTCAGAGTGGGGGTGGTTTTGATTATATCAAAGTTGGCGGTGATCG
TTTTGCGCCAGTTGCTGGATCCTTCTACTCGGTGGTTTGTACGTGTATCC
TTAACGGTCCAAGATCAATTATCCAATACACGTTCAAAGATGACAATGAC
GTAAGTATTCAACAGAGCGATGATTTCACACTTACGCATCCATGTAATTT
GAATGACGTCACTTTCCATAATGGTAACGATGCAGATCATCACCATTCCG
GAAGCGGTTTCAACGGGAAAATGTGGACAAGTGGAATCCATTATTGAGAT
GGCAATTCACAAGTAATGCACCCGTTGTACTCTTCACTTATCCATTATTA
CCAACCACATGGTCTTTCAAAGTGCATTTCACCTTCCAGACCCCCGAAAA
GAGAGTCAGTTTTTTCCAAATCAATTACAATAACCAGGGTGAAGGGCTAT
TTTCCTTGGTGCTTGCTGGAGCTGGTAGAGAAGTAGCATTTCAGAGTGGG
GGTGGTTTTGATTATATCAAAGTTGGCGGTGATCGTTTTGCGCCAGTTGC
TGGATCCTTCTACTCGGTGGTTTGTACGTGTATCCTTAACGGTCCAAGAT
CAATTATCCAATACACGTTCAAAGATGACAATGACGTAAGTATTCAACAG
AGCGATGATTTCACACTTACGCATCCATGTAATTTGAATGACGTCACTTT
CCATAATGGTAACGATGCAGATCATCACCATTCCGGAAGCGGTTTCAACG
GGAAAATGTGGACAAGTGGAATCCATTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000448_pilon | genome | sc0000448_pilon:2741..7732 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 628-1110:484 |
| Aaloc | 565-624:2625 |
| Aaloc | 520-558:2664 |
| Aaloc | 349-510:2826 |
| Aaloc | 199-348:4537 |
| Aaloc | 130-195:4993 |
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