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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:12480..14834+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011965 ID=XLOC_011965|Name=XLOC_011965|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2355bp|location=Sequence derived from alignment at sc0000268_pilon:12480..14834+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGCACCACAGCAAAATATGCCGAATCCTAACCAGCTAGCCAAGTGTCT
CCAAGATTTGACCAACGAGTCTGCAGGTATTCACTCCAATGATGAATGCC
AAATGATTGAAGTGTTGCCGTCAGGTCAGCCCAGATTAACCATCTTAGAG
GACGTCTCTTCAATTAGGACACGACACAACATGGGGCTGGGTCCGCTTAT
GCTTATTGAGCAGATGAGAAACACTTGTAAGGCATCTACCGATATTGTAC
GACCAAGCCTGCGACGTTCACGATTAAAGGCGACAGATAAGTCGTTTTTA
AGGCCATTAGAGGAGGGAGCAGAAAAGGGGAAACCACTCCGTCACAAGAA
GGGAGATGTCCCATGGGGCGTCCGAATGAGGCGTTGGCGCCCTTGCGATG
ATGGCGTCAGCCAAGATGAACGATCGATGGAATTACTTGAACACGTTGAG
GaagacaaattttataagatgACAGGATCATCTAAAAGTGTTGAAAACAC
TAACTCTCATACCCATTCAGTCTTTCAAACAGATGAAGACACTTTTTCAA
TGCCACCTAAAGACCAAAAAATAGAAGATTCTCCATCTCCACCACGGGGA
GAGCAAACACCATCTATGGTGCTGGACACTGAAGGTGTTCATCAAACAGT
TAGCGAACAAGAACTATGTATTGGAGATTCCCTGCTTGGGGCTGTAGGTT
ACGATCGACCAAAGCTCGATACTTCGTCACAGGCAATTGAGGGAAGAAGT
GAGCTCTTTAAAGGTGATTCACCATCAGCTAACATCAAAGTTGCTTCTTT
TGGCGATATAAACACATCACCAGAAGTACACACACAAAGATTCTCAGCTC
CGGTTCTAAACACCGTTCGTTATGACGATATCTTGAGTCCTGAAGTATTT
GAAAAGCACAACAAAGATGTTAAATTAAAACGAAAACAGAGCAAGACCAA
AGCTACGAGAGCCAATATGTCAGCAAGCAAAGAATCGTTCAAGAAAAAGT
TACCATCAGATATGTTTATTGCTCACAAAGATGAAACAGAATCTGCAGTA
TCATTGACGTGGCATTCCGGTAGAAGTTCATCCGGCAACTTGACTTTGTC
CAATAAGTCATTAAAGATTTCCGCAATTGAAGCCGAAAAACAATCCATCT
TTGAAGGAATAAAATCAAGAGGTTTATACGCCGCTTACCAAGCATGCATG
TCAGAATTCGAATTTGAGATGGATAAAGAAGTTGATCAAGGACAAGCGAA
CGGCACCGAGGAGCCTGAAACCGAGAGAGAAAGAGGTCCAGTGATTACAT
ATGACCTCGAAAACGaagtagaagaagaagaaggagagtATGTTGTGTCT
CGTTGGGTTAGGAGCGAAGACGCCGTGACCGAACAATTGATTATCCCAGA
CACTCATTGGGTTAGGAACGAAGATTGCACCGAGACCCAAACATCTGAGG
TTCCAGTTGTTAATGAAGTGGAAGATATCCAAATCGTCAATCAAGAACAA
GAAAGAAGCATCGATGAATCAAAACGTGAAAGTTGTTCTATTGCACTATA
CAATGAGCGGTTGACAAAGGTATCATAAATTCTTCATCAAAAACGTAAAA
TAACATTCACGTACAATTATAATGACAAGTTTCTTTTTGTACAGAAGTCT
AGTTTTGTATTTTAATATTAAGGAATTTCAGGATGTTTTGTCATCGATGA
CGATTTATCTCTAGTGATTTTCGAGAAAAGGCTTACCCAGAAATTTTACG
GTATCCTCGGTCAATCTagggtatttcattttcaaattttagatcATGAA
GGCCATTACGAAAGTTCATCAAGAGCAGTGCGGTCATTTCACTGAATTAG
ATTGCGAACATCGTGTTGGCATGTCTCccatcaatgacgtcatcaacgaA
AATAGAAGGAGCACAGTTATGAGTAGAGGTAGGATATTTTAATTCAATTC
TTGGACTATCCAACAAGATTACTAATgttcagaattaaaaaaaaggcaAT
AAAGTATGTTATAAATATCTTTGGTAAAAATGGGATATTGGAAGTACTAa
aagacatgaaaatatttcCTGGAAAGCTTCTTGGAACAAAAATTCctgga
aaaaagtttcaagcACTGGTACTATAGGCTTGATAGATAACATGACTGTT
AATTTTCAAATCGATTTTTCTTACAGTTTCAGCTTTTATTCAACGACGAA
CAAAGCTTCGAAGAATGCGAAACAGAGTAAAGAGAGTGTGGAAAGCAATA
AAGAAACCTGCTGTATGGTGCATTGGTGGTAGAAAAACCAATACCAACCA
CAATGTTGCAGCCCAAGTATTCCAAGTTGAATTTGTTGATGATGACcaaa
tgtaa Coding sequence (CDS) from alignment at sc0000268_pilon:12480..14834+ >XLOC_011965 ID=XLOC_011965|Name=XLOC_011965|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3768bp|location=Sequence derived from alignment at sc0000268_pilon:12480..14834+ (Clytia hemisphaerica_ch_hm2_pilon)
GATGCACCACAGCAAAATATGCCGAATCCTAACCAGCTAGCCAAGTGTCT
CCAAGATTTGACCAACGAGTCTGCAGGTATTCACTCCAATGATGAATGCC
AAATGATTGAAGTGTTGCCGTCAGGTCAGCCCAGATTAACCATCTTAGAG
GACGTCTCTTCAATTAGGACACGACACAACATGGGGCTGGGTCCGCTTAT
GCTTATTGAGCAGATGAGAAACACTTGTAAGGCATCTACCGATATTGTAC
GACCAAGCCTGCGACGTTCACGATTAAAGGCGACAGATAAGTCGTTTTTA
AGGCCATTAGAGGAGGGAGCAGAAAAGGGGAAACCACTCCGTCACAAGAA
GGGAGATGTCCCATGGGGCGTCCGAATGAGGCGTTGGCGCCCTTGCGATG
ATGGCGTCAGCCAAGATGAACGATCGATGGAATTACTTGAACACGTTGAG
GaagacaaattttataagatgACAGGATCATCTAAAAGTGTTGAAAACAC
TAACTCTCATACCCATTCAGTCTTTCAAACAGATGAAGACACTTTTTCAA
TGCCACCTAAAGACCAAAAAATAGAAGATTCTCCATCTCCACCACGGGGA
GAGCAAACACCATCTATGGTGCTGGACACTGAAGGTGTTCATCAAACAGT
TAGCGAACAAGAACTATGTATTGGAGATTCCCTGCTTGGGGCTGTAGGTT
ACGATCGACCAAAGCTCGATACTTCGTCACAGGCAATTGAGGGAAGAAGT
GAGCTCTTTAAAGGTGATTCACCATCAGCTAACATCAAAGTTGCTTCTTT
TGGCGATATAAACACATCACCAGAAGTACACACACAAAGATTCTCAGCTC
CGGTTCTAAACACCGTTCGTTATGACGATATCTTGAGTCCTGAAGTATTT
GAAAAGCACAACAAAGATGTTAAATTAAAACGAAAACAGAGCAAGACCAA
AGCTACGAGAGCCAATATGTCAGCAAGCAAAGAATCGTTCAAGAAAAAGT
TACCATCAGATATGTTTATTGCTCACAAAGATGAAACAGAATCTGCAGTA
TCATTGACGTGGCATTCCGGTAGAAGTTCATCCGGCAACTTGACTTTGTC
CAATAAGTCATTAAAGATTTCCGCAATTGAAGCCGAAAAACAATCCATCT
TTGAAGGAATAAAATCAAGAGGTTTATACGCCGCTTACCAAGCATGCATG
TCAGAATTCGAATTTGAGATGGATAAAGAAGTTGATCAAGGACAAGCGAA
CGGCACCGAGGAGCCTGAAACCGAGAGAGAAAGAGGTCCAGTGATTACAT
ATGACCTCGAAAACGaagtagaagaagaagaaggagagtATGTTGTGTCT
CGTTGGGTTAGGAGCGAAGACGCCGTGACCGAACAATTGATTATCCCAGA
CACTCATTGGGTTAGGAACGAAGATTGCACCGAGACCCAAACATCTGAGG
TTCCAGTTGTTAATGAAGTGGAAGATATCCAAATCGTCAATCAAGAACAA
GAAAGAAGCATCGATGAATCAAAACGTGAAAGTTGTTCTATTGCACTATA
CAATGAGCGGTTGACAAAGGATGCACCACAGCAAAATATGCCGAATCCTA
ACCAGCTAGCCAAGTGTCTCCAAGATTTGACCAACGAGTCTGCAGGTATT
CACTCCAATGATGAATGCCAAATGATTGAAGTGTTGCCGTCAGGTCAGCC
CAGATTAACCATCTTAGAGGACGTCTCTTCAATTAGGACACGACACAACA
TGGGGCTGGGTCCGCTTATGCTTATTGAGCAGATGAGAAACACTTGTAAG
GCATCTACCGATATTGTACGACCAAGCCTGCGACGTTCACGATTAAAGGC
GACAGATAAGTCGTTTTTAAGGCCATTAGAGGAGGGAGCAGAAAAGGGGA
AACCACTCCGTCACAAGAAGGGAGATGTCCCATGGGGCGTCCGAATGAGG
CGTTGGCGCCCTTGCGATGATGGCGTCAGCCAAGATGAACGATCGATGGA
ATTACTTGAACACGTTGAGGaagacaaattttataagatgACAGGATCAT
CTAAAAGTGTTGAAAACACTAACTCTCATACCCATTCAGTCTTTCAAACA
GATGAAGACACTTTTTCAATGCCACCTAAAGACCAAAAAATAGAAGATTC
TCCATCTCCACCACGGGGAGAGCAAACACCATCTATGGTGCTGGACACTG
AAGGTGTTCATCAAACAGTTAGCGAACAAGAACTATGTATTGGAGATTCC
CTGCTTGGGGCTGTAGGTTACGATCGACCAAAGCTCGATACTTCGTCACA
GGCAATTGAGGGAAGAAGTGAGCTCTTTAAAGGTGATTCACCATCAGCTA
ACATCAAAGTTGCTTCTTTTGGCGATATAAACACATCACCAGAAGTACAC
ACACAAAGATTCTCAGCTCCGGTTCTAAACACCGTTCGTTATGACGATAT
CTTGAGTCCTGAAGTATTTGAAAAGCACAACAAAGATGTTAAATTAAAAC
GAAAACAGAGCAAGACCAAAGCTACGAGAGCCAATATGTCAGCAAGCAAA
GAATCGTTCAAGAAAAAGTTACCATCAGATATGTTTATTGCTCACAAAGA
TGAAACAGAATCTGCAGTATCATTGACGTGGCATTCCGGTAGAAGTTCAT
CCGGCAACTTGACTTTGTCCAATAAGTCATTAAAGATTTCCGCAATTGAA
GCCGAAAAACAATCCATCTTTGAAGGAATAAAATCAAGAGGTTTATACGC
CGCTTACCAAGCATGCATGTCAGAATTCGAATTTGAGATGGATAAAGAAG
TTGATCAAGGACAAGCGAACGGCACCGAGGAGCCTGAAACCGAGAGAGAA
AGAGGTCCAGTGATTACATATGACCTCGAAAACGaagtagaagaagaaga
aggagagtATGTTGTGTCTCGTTGGGTTAGGAGCGAAGACGCCGTGACCG
AACAATTGATTATCCCAGACACTCATTGGGTTAGGAACGAAGATTGCACC
GAGACCCAAACATCTGAGGTTCCAGTTGTTAATGAAGTGGAAGATATCCA
AATCGTCAATCAAGAACAAGAAAGAAGCATCGATGAATCAAAACGTGAAA
GTTGTTCTATTGCACTATACAATGAGCGGTTGACAAAGatcATGAAGGCC
ATTACGAAAGTTCATCAAGAGCAGTGCGGTCATTTCACTGAATTAGATTG
CGAACATCGTGTTGGCATGTCTCccatcaatgacgtcatcaacgaAAATA
GAAGGAGCACAGTTATGAGTAGAGatcATGAAGGCCATTACGAAAGTTCA
TCAAGAGCAGTGCGGTCATTTCACTGAATTAGATTGCGAACATCGTGTTG
GCATGTCTCccatcaatgacgtcatcaacgaAAATAGAAGGAGCACAGTT
ATGAGTAGAGTTTCAGCTTTTATTCAACGACGAACAAAGCTTCGAAGAAT
GCGAAACAGAGTAAAGAGAGTGTGGAAAGCAATAAAGAAACCTGCTGTAT
GGTGCATTGGTGGTAGAAAAACCAATACCAACCACAATGTTGCAGCCCAA
GTATTCCAAGTTGAATTTGTTGATGATGACcaaatgtaaTTTCAGCTTTT
ATTCAACGACGAACAAAGCTTCGAAGAATGCGAAACAGAGTAAAGAGAGT
GTGGAAAGCAATAAAGAAACCTGCTGTATGGTGCATTGGTGGTAGAAAAA
CCAATACCAACCACAATGTTGCAGCCCAAGTATTCCAAGTTGAATTTGTT
GATGATGACcaaatgtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:12480..14834 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1714-1890:2179 |
| Aaloc | 1576-1710:1793 |
| Aaloc | 313-1575:307 |
| Aaloc | 1-306:1 |
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