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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:169018..173798- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011947 ID=XLOC_011947|Name=XLOC_011947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4781bp|location=Sequence derived from alignment at sc0000268_pilon:169018..173798- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACTCAAACAACTATCATTATACAACAACACGGCAATCCATACAC
AGAACAACCAAATCCACCGCCCCAACACGCCAGCATCGATCCTATCCAAC
CGACCTTCAATGATTCAACACCCGCCCAACCTGTAGATTACACCGCCCCT
CAGCAACCTTATTATGTGGATATCCCAAAGGATTATACTAAAACTGGTGC
CCCTTCTGAACAATCACCGCCCGCGTATAACGCCAATAGTGGATACACTG
GATCGGCCGGAGGGCAACGTAATTTTGAATTCTTGAAAACTGTGGCTGGC
ATTCTGAACATCATCGCTCTTGTAAGATGAAATATTAATCAGAGTATTTC
AGTGCTAAAAATACCTACATTCTTCGGGCCAGGGACTGTAGTTTAAATTG
AAATTTCCATGAATGCCTGAAAATCTTGCTCGCGGTATTGAAAAATGACG
TCATCATAAAATGCCCTAAAAAAGGTCTAAAACTTTTCGAATCGACTGCG
GGTTTTTTGGTGGTTTTTGGGACCTCTTTCAGCCACCTCTGATTTATTTT
TAGGTGACTGAGGCTATGAAATGATGTCTTTCTACTCTAGAGAAATTGAA
TACTTTATTCCCAAAGCCTGTGCTATAACTTCCTTAGATAGATTCCACTG
GGTTATCGCTTTCAGTATTATGGTGTTAAAAAAATAGAGCTATCTTGACT
AACTTGTGTATGTTGTAAATTTTTTTCCAGGTTTTGTTATTCACTGCGTG
GATGGCGATGGCAGCATGGCGGGGCCACATTGGGTCCACATTTTATCTCT
TGCATGTGGATGGTTCTTCATTTTTCTTCTTCACCATTCTTCTTCCCTTT
TTCGTGAAAGTTGGATATTTATTACTTGTGGTGCTTGGGCTCATCAAATA
TAGATACATCGATAGACTTGACTGGAATTTTACTGTAAGTGAGATCATCT
TAGGTTACATAATATCTTCCTTCTTTTCGAGTGTAAAACGAGTGATGCGC
CTAAAAAGCCTGGAGCTGTCAATTATGTAGACTACTATCATCTGTATTGA
CTGTACTGTACAGCCACTAATTCAATTTTACAGAAAAGCGATATAACCAC
GTTTGTGTTAACTTTAGCAGTGCAACTTTTTCGGAACACGTAAGGCCTTT
TCGAATTCTTGGCTTGAAATTTTTTCCATCTTTTACAATAAAGTTAACGT
ATTACTTCGAATAAACGCCCCTTTTAACGAAGCATTTTTAATGAACGCCC
CAAAAAATAAACACCTGTCCTCTCTTCTACTCCTCTAAGAGGGGCGTTTG
TTTGAAACAAATAGCTGTAAGAAAGTATGATATGAGAAAAAAAATTAAAA
ATAAGACGCTCGAAGTAATACTGTAAGATGAATTCAGTGAAAAATTACTT
TATAGCCCTTTTGTTTAAAGCACATATGAATTTTTAGGTGATGGTGAATG
ACGGATTGAGTGGATTCTTCATGCTTGTTTCATCCTGTATCGTTGCCCGC
AGAGTGGAAGAACACCTATGTCTCAATCATAATTGTACCATCATTCAAAC
AGCTGCAGTAAGTAACTACACCCACACTGTCTCCCGATTTCTCGACTAGA
AGTATTTCGTATTTAGGTTTAGTGTCTCCCATTTTATATTCTAAGCCTTA
CAACATTTTTGATCTTTCCTATCTTGAGATCGCGTATGGCGGGTTTTAAG
TCTAATAATGTTAAAACTCTACATTCAACAAAAAGTAAGTTTTTTAACTG
TTTTTAATATTTTGTAGGCAAATCCTCTTTTTTTCAAATATTGTGACCAT
GATTGTATCATTCCAGGAAATTTTCTTATCCACAAAGACAGGATCAATCC
CAACTATCTTTAACTTTAGTTTCGAAGCATCCAATATACCGGGTGTTTCA
AAAAAAAGTGAACACGTTTGAAGTTAGATTATGAGAAAACTAAAACAAGC
TAGATGCTGAATGGACCTACCTGATGATGAGAGTTAGATAGCAATGCGAG
GAGAAAAATGAAAAAAATCAGTCAGAAAATATAGTGTTTAGCGAAAATGC
ATAACGTAATAAATTCATCATTGATTGTTGATGGAGGAGAGGGAAGGGTT
GTAGGGAAAAAATAAATAGAAAGTTCTGGTCACAAAATTCAGTTTTATTG
ACAATTGAATAACGCTTGATGGTGAGCATTGTTATCAATAATGTTTTTGT
GTGAAAAATATAGAAATATAAGGAAATTTAAGGCATTTTCAACCGGAAAA
AATTTTTTCTCAAAAATCGGACTCGGCCATGTTTTGGGCATTTTTAATGC
GCATATTTGAGCAAAAAATCAGAAAAAACTAATGATAAAATCTCGAGAAA
ATGCCAAAAAAACAGTTTTTCCGGCATATTTCCGGCATTTTCAGCCGGAA
AAAAATGTTTTTCGAAAATCGGGCTCCGTCACATTTTTGGTATTGTCATT
TTGCATCAGTGTGCAAAATTTCATAAAAAAAATATAAAGTACCAGGCCGC
CAATCTCGCACTTATTTCTACCATATGTGTAAAAATCGTAAATATACCAT
ATGTGTAGATATTAGAATCCGTAAATCTACTATATGTGTAGATATTGTAA
ATCTACCATATGTGTAGATATGTAAAAATCCATAAATCTACCATATTAGT
AGTTGAGGTATAAATACTATCCAGACAATTCTAAAAAGAATGACAAATAA
CTATTAAAAAGCGACAAAAAGAACGACAAAAAGAACGACAAACCTTAACC
CTAAGCCTAACTATCAAAGAACGACATATTTCAACCCTAACCCTAACTAT
CAAAGAACGAAACGACATATTTATAAGGAAAAAGTCCAATGAAAATCCAG
AAAAACGGCGATTTCCAGCAAAAACTATTTTGTACCATTGTGCCAAAAAA
AAAACAGAAAAAAGTAATGAGCCAATCCTAAGAAAAGCTGGTAACAGACG
AACATGGGTTAATTCAGGGGGGTACTAAGTTGTGGTACTGGACCAGTGCT
GAAAAGTTGTACTTTCTTGTTTTTTGAAATTTATCTGAGACCACCACCAC
TTAGTACCCTGGTACTAAGTTGAATTTACCCCTTAAAATAGGTGTACCAC
CCCTTAGTGCCCGGTACCATCTTGATATAACCATTGAGAAATGACACCAC
CTTTAAGTACCCTGTACTAAGTTGATTTTCCCCCTCAAAATAGGTATGCA
CCCTTTATTTCTTAGTAATAGTACTTTCTGGTACACCTACTTTAAATTTT
CTAAACTTTCTTTCTTTTTAACTTCATTTTTTGTGGAAATTTCAAACTCA
TTTTAGGCCAAAATCAATTATAGAATCTGAAAGCTCTTGAAAAACTATAT
AGAAGACTTTTTTCAACATAGCTGTTCAAGAGCTTTCAGATTCTATAATA
ATTGGTTTTGGCCTAAAATGAGTTTGAAATTTCCATAAAAAATGAGCTCT
TGGGCTTTACCCTTGGTTTTCATTAAATGGGTCCAGAAATAAAGGCTACC
CCTAAAATTTTTCTGGGCCACCCTTTTAATATCAATCCACAGGGTATTAG
GCATGTCTGGTCCTAATTTGGTGCTTTGTTCCAAATTTGCACGATAATTA
CACTAATCAGGCTATGCCCCCCCCCAATAATTTTTTCAAAAATGGTTATT
TTGCAAAATGCAAAGTTTTTCTTTTTTGATTTGTCATAATTGTCTTTATG
TGCATGTTTTGAGTGTATTTTTAAGCAATCTAGAGCTCATATTTTCAAAA
TTTTCTCCCTCGGGCCAAACCATGGTTGGCCCTCGCGGTGTCAATAAACT
TCAGCCCCCCCCCAATATGAAAATGCTTCCTACGGCACTGCTTACCTTAT
CAGACCAACACCCGGCACTGGCCCCCACAACTTAGTACCGACCCCCCCCC
TGGTTAATTTAAAGGACCTCCACCGGGGTACCCGGAGGTAGGTCGAAAAA
TGTTTTAAATCCAAACTTTTCGCCTTTCAAAGGAGGAAAGGCTAACTTAA
TTTTTGAGCTATCATACTTCAAATTTGCTTCACGTGTTCAAAGTTATAAA
GAAAATTTGAAAAAATCACCTTTCGAAAAAGCGTCATTTTTGAGTAATCT
TAAAGTATGAGAGCTCAAAATTCAAATCATTCTTTCCTCCTTCGAATGGC
GAAAAGTTTGAATTTATAACATTTTTAGTTTCCCCACAAACTAACTTCAA
AGGTGTACACTTTTTCCTGAAACACCCTGTATATGGTTTTATTACAAGAA
AGTAGAGGTACAATGCTGGACAAAAGGTTTGTAGACTTCTGCAATATTTG
CAAAATACTTCAATATCGATCAAAAACAAGTTCCCAAGAGGCTCTGGGTG
CTTTCCAAACCTATCCAAAGCTGTTCAAAGTCTATCAAAGTCATCCACTG
CAGTCTAACCGCAAGGGCAAACCACAAGGGCTTGGTTAACTGGCTTACAC
CAGTATCAAAACGCTGATTTTTTGCTTGTGGTTCCCTCAAAAGCAATTCA
AAAGCAATGCAACGACTTCAAAAGTGTTTTTCTTAACTTCCATCCCCTTT
CAGACACATTGAAGAGTCATTTTGCTCTATTTCTCATCATTTTTTACTGA
AATTCCATTTGTCTACAACCTTTTGTCCGGCATTGTACCTTTAAGGGAAA
GAAAGCAATATTACAAACAGGTTATTTCTTCTCATTTTCAGGCATTTGGA
TTCCTTTCATCATTCATGTTCGCTGGCATCGTAGCTTATTATTTCAAAAG
ATGGAAGCAAGGACCTCCTGTTCACCAATGA Coding sequence (CDS) from alignment at sc0000268_pilon:169018..173798- >XLOC_011947 ID=XLOC_011947|Name=XLOC_011947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000268_pilon:169018..173798- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACTCAAACAACTATCATTATACAACAACACGGCAATCCATACAC
AGAACAACCAAATCCACCGCCCCAACACGCCAGCATCGATCCTATCCAAC
CGACCTTCAATGATTCAACACCCGCCCAACCTGTAGATTACACCGCCCCT
CAGCAACCTTATTATGTGGATATCCCAAAGGATTATACTAAAACTGGTGC
CCCTTCTGAACAATCACCGCCCGCGTATAACGCCAATAGTGGATACACTG
GATCGGCCGGAGGGCAACGTAATTTTGAATTCTTGAAAACTGTGGCTGGC
ATTCTGAACATCATCGCTCTTATGGCAACTCAAACAACTATCATTATACA
ACAACACGGCAATCCATACACAGAACAACCAAATCCACCGCCCCAACACG
CCAGCATCGATCCTATCCAACCGACCTTCAATGATTCAACACCCGCCCAA
CCTGTAGATTACACCGCCCCTCAGCAACCTTATTATGTGGATATCCCAAA
GGATTATACTAAAACTGGTGCCCCTTCTGAACAATCACCGCCCGCGTATA
ACGCCAATAGTGGATACACTGGATCGGCCGGAGGGCAACGTAATTTTGAA
TTCTTGAAAACTGTGGCTGGCATTCTGAACATCATCGCTCTTGTTTTGTT
ATTCACTGCGTGGATGGCGATGGCAGCATGGCGGGGCCACATTGGGTCCA
CATTTTATCTCTTGCATGTGGATGGTTCTTCATTTTTCTTCTTCACCATT
CTTCTTCCCTTTTTCGTGAAAGTTGGATATTTATTACTTGTGGTGCTTGG
GCTCATCAAATATAGATACATCGATAGACTTGACTGGAATTTTACTGTTT
TGTTATTCACTGCGTGGATGGCGATGGCAGCATGGCGGGGCCACATTGGG
TCCACATTTTATCTCTTGCATGTGGATGGTTCTTCATTTTTCTTCTTCAC
CATTCTTCTTCCCTTTTTCGTGAAAGTTGGATATTTATTACTTGTGGTGC
TTGGGCTCATCAAATATAGATACATCGATAGACTTGACTGGAATTTTACT
GTGATGGTGAATGACGGATTGAGTGGATTCTTCATGCTTGTTTCATCCTG
TATCGTTGCCCGCAGAGTGGAAGAACACCTATGTCTCAATCATAATTGTA
CCATCATTCAAACAGCTGCAGTGATGGTGAATGACGGATTGAGTGGATTC
TTCATGCTTGTTTCATCCTGTATCGTTGCCCGCAGAGTGGAAGAACACCT
ATGTCTCAATCATAATTGTACCATCATTCAAACAGCTGCAGCATTTGGAT
TCCTTTCATCATTCATGTTCGCTGGCATCGTAGCTTATTATTTCAAAAGA
TGGAAGCAAGGACCTCCTGTTCACCAATGAGCATTTGGATTCCTTTCATC
ATTCATGTTCGCTGGCATCGTAGCTTATTATTTCAAAAGATGGAAGCAAG
GACCTCCTGTTCACCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:169018..173798 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 646-735:91 |
| Aaloc | 526-645:3345 |
| Aaloc | 322-525:4052 |
| Aaloc | 1-321:4782 |
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