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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000268_pilon:175166..177538- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011946 ID=XLOC_011946|Name=XLOC_011946|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2373bp|location=Sequence derived from alignment at sc0000268_pilon:175166..177538- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAAATCACGATGGACAGAGAGCTTGATGTCTTCAGCAACTACAGGAG
CATCACCAACAAAATTAAGAAACGATTCTTAAAGAAACCGAACTTTAATG
AAGCGAGCGAACAATTTGCAACGCTGACACGCGTCTTGAAACACCAAGAA
TGTGCTCAGTATGCAGGTTTTTGTTGCTTGGCAAAAGCTCGTTGTGAAAA
TACTCTTGGCAACTGCGTGGCTGAAGCTGAAGCCCTACTGGAGGCTGCCA
GGTATGTTGTTCTTTGTTTAACAAGATTTCAATTTCATGCTAGAGCTTGA
TGTGAACTCCAGTTTTAAGTTAGGAGGCTTTCCCTTCTCAAAAATCTGGA
TAATTCATCGAAATTTCAAGAATACGTGCTCAGGCGGTGTTTAAAATCTA
TTCTCCGTCTCAGGCGAAAAACCTTGCCTCGACCGCTGTGATTCATATTT
GATCTGTTTCCGGGGGGGGGGGGCAGCTGGGCAAAATGACCGACGAGTAT
GTGCGGGCCCTAAGGGTACCTTTTCCAAGATGTTTAAAATGCACTGTAAG
GGTCGGAAAAACTAGAGATGCACTGTAAGGGTAGAAATTTCAGAAAATTC
TTGAAAAATCTAGATATTTGGCCCAAAAATGGAAGAATTTTGACAATTTT
TTGCACGAAAAGGGTTGAAAATTTGGGGGGAAATGCACTCTAAGGGTATG
ATTTTCACCGACTTTTGCAGCACTGTAAGGGTGCAATTTTAAAAGCCCAT
TTTTGGCCCGCACATACCGTCAGTCCGCAAGCCCAGTCCCCCCCCCCCGG
GATCTGTTTTCATTGGCTGAATCAAGAGCTCGGGTATTAATCATTATCCA
TCAGGGTTTTTTTTTTTAACTAAGATTCTTCTAAAATTTAAAAACAGTTA
AGCGATATTTCGGTGGTGTCACCATTCTCAAGCTGAAAAAAAACCCGAAA
AACTGAAAAAAACTGAATTTTTAGATGTAAATAGAAATTTGTGAAATCTG
AAAGAAGACTTGTATTTTTTATAAGCTTGAGAATGGTGACACCACCGAAA
TATATCGCTTAACTGTTTTTAAATTTTAAAATTTGAAAAATGGCTTCAAA
TTATAACATAAGATTTTTCAGTTATTGAAAAAATAAACACAGAAAAAAAA
CACTGAAAATGTCCATATCTCTCCATGTCTTTCTACCTTTTTTGTTAAAA
CCTAGAAGGGTTACAATATTTCCCATCTTTCTTTGGACCAGGTTATTCTT
CCAAGCGGAGAAAGTGAACATCGACGCCAAGTGTGCCGCGTTGGATGAAC
ACTTACCTGAAGCTATTCATTGTTACAACCAAGCTGTCAAAGGATACTCT
AAAGAAGGTAATGCTGAATCTTTGATTTACCGGGCAACATTTCAATTTTA
TACGTAAGAAGCTGTTCGATATTTACTTGGAATAGACGGGCGTGAGGCTT
ACTAGAGTCTTTTCCAAAAAGTATGTCAAGCATTAAAGCTTAAAGCCCTT
AGGGATGAAGTGGAATCTTCAACCGTTTCCAAGCATGAAGCCTCTACGGC
GCACTTGAAACGATGACTTGAATCTGTTGCTTTCTAAGTTTTCTCACCGC
ATTTTTTTTCGAAATCTAACATAGATTTTAAATCTTGCGTTTCTATGAAA
ACCACTCGGGTGGTTTTGTGTGAAAACCATGCTTATTTCCCCTTCAAGAT
ATTCCTCACCAGCCCTTCACCTTCGGGTTTTATCCTTTAATGATTTCAAC
TAAACCACAATGATTAACAGATTTCATATACATTTTGTCTTTGACTTTCA
GGCCGTCATGCTCAAGCATCCATCGTGGCATTGGAGCTCGCTCAAAATCT
GCTCAGTATCGGACGTGCGGACGAAGCACACAATCATTTTGTACGCGCGG
CCGAAATGCAACGCAAGACAAGCATCATGGATTCGTTATGCACGTTGCGA
AAAGCGGCTTATTGTCAATTTTATTTGAACAATCTACCTGGTGCTTTAAC
TCACCTTTCGGAAGTCATGGAAATGATCTCATCCATGGTGGCACAGGATG
CGAACAGTTTAACATACACTCTGCAAAGTATTCGACAATCAGTGGAAATC
ACTTTCGTTTTCATCATGTTATTATTGAAATCTTCACCAATGGAACTTAG
TAATGAACATTCAAAAGTCATGGAAACTTATACTTGGGAAAACGAGGAAG
AAAATAATCGAGTCTTACCAGAGGATTTGTTCTTGCTGATCCAGTCTGTC
GTCATGGCAACTAATGCTAAAGACGTTGATACTTTAACTTACCTACAAGT
TGAACTATATCCGCAACTGGATACAGTGCAGTGTGAATTGTTTCAGAAAA
TTATACACGAAACGAATGAATAG Coding sequence (CDS) from alignment at sc0000268_pilon:175166..177538- >XLOC_011946 ID=XLOC_011946|Name=XLOC_011946|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1878bp|location=Sequence derived from alignment at sc0000268_pilon:175166..177538- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAAATCACGATGGACAGAGAGCTTGATGTCTTCAGCAACTACAGGAG
CATCACCAACAAAATTAAGAAACGATTCTTAAAGAAACCGAACTTTAATG
AAGCGAGCGAACAATTTGCAACGCTGACACGCGTCTTGAAACACCAAGAA
TGTGCTCAGTATGCAGGTTTTTGTTGCTTGGCAAAAGCTCGTTGTGAAAA
TACTCTTGGCAACTGCGTGGCTGAAGCTGAAGCCCTACTGGAGGCTGCCA
GAAAAAAATCACGATGGACAGAGAGCTTGATGTCTTCAGCAACTACAGGA
GCATCACCAACAAAATTAAGAAACGATTCTTAAAGAAACCGAACTTTAAT
GAAGCGAGCGAACAATTTGCAACGCTGACACGCGTCTTGAAACACCAAGA
ATGTGCTCAGTATGCAGGTTTTTGTTGCTTGGCAAAAGCTCGTTGTGAAA
ATACTCTTGGCAACTGCGTGGCTGAAGCTGAAGCCCTACTGGAGGCTGCC
AGGTTATTCTTCCAAGCGGAGAAAGTGAACATCGACGCCAAGTGTGCCGC
GTTGGATGAACACTTACCTGAAGCTATTCATTGTTACAACCAAGCTGTCA
AAGGATACTCTAAAGAAGGTTATTCTTCCAAGCGGAGAAAGTGAACATCG
ACGCCAAGTGTGCCGCGTTGGATGAACACTTACCTGAAGCTATTCATTGT
TACAACCAAGCTGTCAAAGGATACTCTAAAGAAGGCCGTCATGCTCAAGC
ATCCATCGTGGCATTGGAGCTCGCTCAAAATCTGCTCAGTATCGGACGTG
CGGACGAAGCACACAATCATTTTGTACGCGCGGCCGAAATGCAACGCAAG
ACAAGCATCATGGATTCGTTATGCACGTTGCGAAAAGCGGCTTATTGTCA
ATTTTATTTGAACAATCTACCTGGTGCTTTAACTCACCTTTCGGAAGTCA
TGGAAATGATCTCATCCATGGTGGCACAGGATGCGAACAGTTTAACATAC
ACTCTGCAAAGTATTCGACAATCAGTGGAAATCACTTTCGTTTTCATCAT
GTTATTATTGAAATCTTCACCAATGGAACTTAGTAATGAACATTCAAAAG
TCATGGAAACTTATACTTGGGAAAACGAGGAAGAAAATAATCGAGTCTTA
CCAGAGGATTTGTTCTTGCTGATCCAGTCTGTCGTCATGGCAACTAATGC
TAAAGACGTTGATACTTTAACTTACCTACAAGTTGAACTATATCCGCAAC
TGGATACAGTGCAGTGTGAATTGTTTCAGAAAATTATACACGAAACGAAT
GAATAGGCCGTCATGCTCAAGCATCCATCGTGGCATTGGAGCTCGCTCAA
AATCTGCTCAGTATCGGACGTGCGGACGAAGCACACAATCATTTTGTACG
CGCGGCCGAAATGCAACGCAAGACAAGCATCATGGATTCGTTATGCACGT
TGCGAAAAGCGGCTTATTGTCAATTTTATTTGAACAATCTACCTGGTGCT
TTAACTCACCTTTCGGAAGTCATGGAAATGATCTCATCCATGGTGGCACA
GGATGCGAACAGTTTAACATACACTCTGCAAAGTATTCGACAATCAGTGG
AAATCACTTTCGTTTTCATCATGTTATTATTGAAATCTTCACCAATGGAA
CTTAGTAATGAACATTCAAAAGTCATGGAAACTTATACTTGGGAAAACGA
GGAAGAAAATAATCGAGTCTTACCAGAGGATTTGTTCTTGCTGATCCAGT
CTGTCGTCATGGCAACTAATGCTAAAGACGTTGATACTTTAACTTACCTA
CAAGTTGAACTATATCCGCAACTGGATACAGTGCAGTGTGAATTGTTTCA
GAAAATTATACACGAAACGAATGAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000268_pilon | genome | sc0000268_pilon:175166..177538 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 370-939:571 |
| Aaloc | 253-366:1132 |
| Aaloc | 1-249:2374 |
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