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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:1024158..1027049+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011931 ID=XLOC_011931|Name=XLOC_011931|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2892bp|location=Sequence derived from alignment at sc0000107_pilon:1024158..1027049+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAAGGGaaagttttcaaagttttgataggATTTGCGATTCCTGT
CATTATTATTGGTATTGTGTTGGTGATTGTTGGCTACCGTAATGGTTCAG
AACAAAAGGTATTATAAAATAATTCTCTACGTCGCCTGGGGTCCACTTAA
GgtttttttgatagactggctGACGCGATCAAGTGATTGTATTACCAGCT
attaagtttttgatttttttcgcgttggtgtaatgcaacatgctccatct
caccaacctgaaaccttgtgtctccaccccatttttctttctacctaTAA
AAGTGAAATCTAACTTTTGTCCCTGGAACAATGGAGTAAAATTGATTCGA
GTCAATTTTgttccattgtcccagggacaaaatcagcatgtcttttgtct
ttttgtcccattaaaaaaaaaagaaaccatggtcacacacacttttttct
tgtgttggtgggatggagtaATGGacgcattgcaccaacgcgaaaaaaac
ttctcgtgtcctaACTTAGCCTCGCTTTCATGTTAAATGTTCCTGGTTTT
GGTATTGCACAATTGATATCGGGAAAGGTAACAGCCCATTCGGGtttttt
tAAGGGTATGGATCTTTCCGTGGGATTATACCAATATTTTTCTAGTTTAT
CTTTTTCCCGGTTGTCTAACTTTTCACGGAGCTTAAACTTGGgctatttt
tgagaattttcccACCGAAGCCGatttgacaatttttccagggtaatgat
acaggggtgtttcaATAAACTgatgtaataaaaatgacaacttaCAGCGA
ATATTTCGTGTTATTAAAAGAGAGCTTCTTAAAAACACCCGGCAAAATCT
TTACAAGTTTTAAAGGCTTGGGAAGAGGAAAATTAGGGTCAGACCCAATC
GTTGGCTTGAGATCAAATTCGAACATCAGAGTTTTCAAGTCAGACTATTA
GAGTGGCTTATTCAGTATAGGTTTAAGCGGGCTGGAGAGAGGATTTTTGA
TTGCCATACACGTTAGGAATTCGTTCAGATTAAAAAGAAAGTatcatttc
aaagtttttggcTATGCCACGTAACGTAActcttttcaaaaacaaatgcG
CCTAAACGGAAATGGAGCGTCAATCTTATCTCTCATTGTTTTAGACAAAA
TTCTAATTTGTCTAAATTCAAATTTAGACtttttttCTATTCTGCGGTAA
ACCTTTATCTGTCTGCCTAATTAAAAGTCTATTTCGCTCTTTTATGTTCC
CCTTTCTTTAATTGCTTTTTGATTCGAATGAAATCTAATTGGAATCTTCA
AATTGTctatgagcccccccccccttcaatCCACGCAATCaagcattttt
tatttaatttccacgcattcacgcaagtgaaaaagctcattcacgcattc
acacgaGCCCCTgggggggggCTGTCTATTTTTTGCTCCATTGTTTGAAG
GCTGCTATGAGACTTTTTCCACATACGTTTGGGGGAAATATCTCAAATTT
GATTTCTCATCTGACTATCGAACACTCTTACACTGTTGTATGTTTCATGT
GTTCCCAGCTGAATGTTAAggccgaaacgaaatgaagccattctattggt
gaCATTAAAGTGTTACGCCAcacttttaaccaatagaatagcTTGATTCT
GCTTCGGAGCGAAACAGAACCATAACGCGCGAACATGGTCTTACTTTTTG
AATTAGAGGGAGTTGACTGTAGGACACTATTTTATATTTGCTTTATCTGT
TTCAGACGCAATTAACATCAACGATCGTAGACGCAGGAGGAAGCGGAACA
CGTTTAATTGTTTATCAATATACAGATACTCTTGAAGAACACAAAGTGGA
ATGCGAAGGTTAGTTTTACTTTATCACTGTGTGGCTCCGAGGTTGCCCAG
CTGGCatacgacgttgtttcaacgttcatctaacgttatatcgacgttgt
gaacgttagataaacgtcaaaaaaacgttgtgtgccagctgggtgatTCC
GAGAGCATCTTTATCCTTTTTTCTCTCGCTAAGTTATCCGGGACAGGGAA
GTTGTTGAGTATGCGAGCCAAGACAGTTTCTTTTTCACGCCCTTGAAATc
tcttcaaaagcttataaattAAAAAGCTATTTAGGCAATATATGGGTTTC
CAAAAATCTAAAGaagtcataaattcttgaaatttcaatcagagtttaat
gatttttacattttaaatctCTCAAATCgtctcaaatttaaaattttttc
ttaatattggcccaaaatttgaaaatctctgGCAGCAATTGTGATTCACT
AAATCACTTACCAGTAATAGACCTTTATTACTCTTTTTACggtaagaaat
tttgaaatttatcacaaatttatcatttttatgagCGCGAACTATATAAC
AACACGAAGCTTCGGTGGCCGAAATcttaagaataagttaaaaacattct
tttctAAGGCTTTTTGGACTCTAAAATACCTGATTTTTTAGaagaatgga
caaaaatactccaaATGGTGAATATAAAAacatgtttagaacattttagg
cttaatatccaaaaaactaagagtatctgaaggcttcaaaaattttggat
gttcttataacaaaaacgTGTACAGAGAAGTCCCCTATCTCtgcacacag
cgttgtttcaacgttcatttaacgttctATGGACGTTAtggacgttagat
gaacgttgaaacaacgttatgtgtcAGCTGGGATATTTGTATTTTACAGG
TATTGGACTCGGTAATTGGAAAGAAGAAGATTACCCAGAACTTGAACGAC
AACTAAATGAATGTTATAAGAAAGGTCACCAATATTTACCTGATGGTTCT
ACCAACACACCAATATGGTTCGGTGCCACTGCTGGTATGCGT Coding sequence (CDS) from alignment at sc0000107_pilon:1024158..1027049+ >XLOC_011931 ID=XLOC_011931|Name=XLOC_011931|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=708bp|location=Sequence derived from alignment at sc0000107_pilon:1024158..1027049+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAAGGGaaagttttcaaagttttgataggATTTGCGATTCCTGT
CATTATTATTGGTATTGTGTTGGTGATTGTTGGCTACCGTAATGGTTCAG
AACAAAAGATGGCTGAAGGGaaagttttcaaagttttgataggATTTGCG
ATTCCTGTCATTATTATTGGTATTGTGTTGGTGATTGTTGGCTACCGTAA
TGGTTCAGAACAAAAGACGCAATTAACATCAACGATCGTAGACGCAGGAG
GAAGCGGAACACGTTTAATTGTTTATCAATATACAGATACTCTTGAAGAA
CACAAAGTGGAATGCGAAGACGCAATTAACATCAACGATCGTAGACGCAG
GAGGAAGCGGAACACGTTTAATTGTTTATCAATATACAGATACTCTTGAA
GAACACAAAGTGGAATGCGAAGGTATTGGACTCGGTAATTGGAAAGAAGA
AGATTACCCAGAACTTGAACGACAACTAAATGAATGTTATAAGAAAGGTC
ACCAATATTTACCTGATGGTTCTACCAACACACCAATATGGTTCGGTGCC
ACTGCTGGTATGCGTGTATTGGACTCGGTAATTGGAAAGAAGAAGATTAC
CCAGAACTTGAACGACAACTAAATGAATGTTATAAGAAAGGTCACCAATA
TTTACCTGATGGTTCTACCAACACACCAATATGGTTCGGTGCCACTGCTG
GTATGCGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:1024158..1027049 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 214-354:2752 |
| Aaloc | 109-210:1756 |
| Aaloc | 1-108:1 |
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