XLOC_011921 (mRNA) -

Overview
NameXLOC_011921
Unique NameXLOC_011921
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000107_pilon:1149169..1150575+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011921 ID=XLOC_011921|Name=XLOC_011921|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1407bp|location=Sequence derived from alignment at sc0000107_pilon:1149169..1150575+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGTAGAAGATGTGGGGCGTTATATCGATCCGCCCACTGTGAAACCGCC CACCACAGAAACGCCTGGATGGCATAACGGAACTGTAACCACCACAAAAG CGCCGGTTGTGTACGATACCTACAAGTGGATGTTTACCCCGCCCACGtgg tatttatttattttgttaggtatgttcaatttttattataaaaactaAGT ACTTcatcaaaaaagctttttacGATCAGTGTACAATCATAGTCGTATCA tttaagaaaaaagggaaattcctgtacggaatcttataaccacaaacgat ttggaagcgctctaaattactTAAGAGCTTAGGatctaaggatccaaaag ttcaagaatggtctaacaaggctcagaatatagcatggaagtctataaac ccctcccgaattgaaatactcgaataaatttatcaattagcccaaaagcg gctttctcgcccgaactccaaatttcgaaaaacgaggaaataagctaaat tctcaataaattttcaCCATGATTTTAGTTATCTATTGAGTAAGAGAAGT GGTGGCAAACACACTGGCGGTGTGTGTGGATTTAGAATCGTACCATTATA GTGCAGCATAAAATCGGTGAAATTTATACCCGTGCAGTGCATTGTTCTCT AAATTTCAACACTTAGAGCCAaaaaatttgctgaaatttccaccgtTACA CTTACActggaatcttcaacctttccgAGGCAAAGCAAAAATCGATCCCT TATAATTTTGCATCATTTCGGATGGCAGATTGAATCTAGTATTTGCTTTG TTTTCGTATTTTACATTTTGCGAATCCTGGTTACCTGTTACTTTCAAACA AGCGTTTATTAAAATCCACGTAGGCCGTGCAATTTATACAGGAAATATGC GATCTGAAATCCTACATAGGCTATTTGACTCTAGCCTTCGGCTATACCTT ATTGGAAATTACCCTCCTGGAATTTCCGGATTTTCAGAAAAGCCTATCAA TGATACAGGCTAATTAACTGGCTTTAATTCCTTCTTCAATAATTccaact tctattattcgaatctttctataattcgaattaattctcagtccccgtca aggggAAACCTTTTGTGAAATGctttttctattattcgaatctctctcta attcgaacaaattagtcTCGCCGTTCGAGCTCGAGAGTTAGATGTGAATA CGTTTTAACGTTCAGTTTATCtgttaaaaaacttttccaTTTTATTTATC CATCTTTACTTTAGGTATTTTCTTTATGACGGCCATGTTGCATGGATTTG AAGGGTTGAGCATTATTCATGGATTTTGGTATCTACTCTGTTTACCGTCT GGTTATTTACTATTGACCATCTACTCTGTGGCAAACTTGACAGACAGGAG TTGGGGT

Coding sequence (CDS) from alignment at sc0000107_pilon:1149169..1150575+

>XLOC_011921 ID=XLOC_011921|Name=XLOC_011921|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=624bp|location=Sequence derived from alignment at sc0000107_pilon:1149169..1150575+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGTAGAAGATGTGGGGCGTTATATCGATCCGCCCACTGTGAAACCGCC
CACCACAGAAACGCCTGGATGGCATAACGGAACTGTAACCACCACAAAAG
CGCCGGTTGTGTACGATACCTACAAGTGGATGTTTACCCCGCCCACGtgg
tatttatttattttgttagACTGTAGAAGATGTGGGGCGTTATATCGATC
CGCCCACTGTGAAACCGCCCACCACAGAAACGCCTGGATGGCATAACGGA
ACTGTAACCACCACAAAAGCGCCGGTTGTGTACGATACCTACAAGTGGAT
GTTTACCCCGCCCACGtggtatttatttattttgttagGTATTTTCTTTA
TGACGGCCATGTTGCATGGATTTGAAGGGTTGAGCATTATTCATGGATTT
TGGTATCTACTCTGTTTACCGTCTGGTTATTTACTATTGACCATCTACTC
TGTGGCAAACTTGACAGACAGGAGTTGGGGTGTATTTTCTTTATGACGGC
CATGTTGCATGGATTTGAAGGGTTGAGCATTATTCATGGATTTTGGTATC
TACTCTGTTTACCGTCTGGTTATTTACTATTGACCATCTACTCTGTGGCA
AACTTGACAGACAGGAGTTGGGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_011921XLOC_011921-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107_pilongenomesc0000107_pilon:1149169..1150575 +
Properties
Property NameValue
Aaloc172-312:1267
Aaloc1-168:1