XLOC_011893 (mRNA) -

Overview
NameXLOC_011893
Unique NameXLOC_011893
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000353_pilon:28311..29729-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011893 ID=XLOC_011893|Name=XLOC_011893|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1419bp|location=Sequence derived from alignment at sc0000353_pilon:28311..29729- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCAGAAGTGACCTGTACGCAAAAAATTGGTCTGAGAATGTTACGTA CACCTCTGATATTGTCCTGTTTCCAAATAACACTCCTGAGCTCCAAAGGA TTATAAAGGATGTGCGGTATGCAAAACTGAAAGTTATTGGTACAAGACAT TGCTTCAACACAATTGCCGATACTGGCCATAACACAGATTTAGAAACGGG TGAAACTGCTCATATTTGCCTTGAAAATATGACGTTGACTTATTTTGACA AAGTAGTTATCGGTGGTGAAGAAGATCTAGGTCTACAGCCTGTAGTTACT TTTGGGGCTGGTATGACTTATTCAAAACTGATTGATATTGTTGATGCAGA AGGTTTTGCCATTCAGAATCTACCTTCTTTACCCCACATCAATGTTGTTG GATCAATGATCACCGGCACACATGGCTCTGGTCATAAATATCAAATTCTT ACAACACAAGTTGTTGCTTTTGATATGGTTTTTGCAAATGGGAAGCTAGA ATCGTTATCAAAACCAACAACTCCAGATTTTACAAATTATTTGATCAATT TTGGTGGTCTTGGAGTTATTACTTCAATGACAATTAAACTTGTGCCAACA TTCATGGTTTCTAAATCTATCTATAAAAATCTGAAATGGGATATACTTTT TGACAAAAACTATTTTGATAACATCATGCATCACCAAGATTTTCTTAGCT GTTTCTGTACATGGAAGACTCGTGAAATGAGTTCAGTTTGGGTTGGTAAG AAATACTATGAAGGAGATCCATTACCAGTGAAAGAAATTGAATACTTTGG TGCAAAGCATATCACTGGGAATCGAATTCATCCTGTTCCAGGTCGAGATT CTTCAGTCAATGTAACCACAGGAGTAGGTAAATGGAGAGACAAAATTTAT CACTTTTTACCTGATAAACCTCCAAGTTCTGCAGGAAATGAAATTCAAAC AGAGTTTTTTGTTCCTTATGAACACTTTATAAATGCAATGGAAGCTCTTT ATTTGATTAAAGATAAGTTTCAGCATCTCGTTCAAGTATCTGAATTTAGA ATGGTGTTGGAGGACAACCTACCCATGAGTCCTGCAAAACATCAAACCTG CATTGGCATACATTTCACCTGGTGGCGTGAACATGACAAAATCCTTTCTG TCCTACCATTGATTGAGAGCACTCTATCCAAGTTTAATGTTAAACCTCAC TTTGGTAAACTATTTCAAATGTCCGGACCAAAATTTGAAAACCTTTACGG ATCTGATCTTGATAAGCTACGAGCACTTTGTTACAAACATGATCCAACTG GGAAATTTAGGAATAATTTTATGGAAAAATATATTTTCACATCAAGATAT GGAAAGATGACAACAGAAGAAGAAGCTGTCTTGTGTAAAAAGCATTTCCC TATCATATCCAAGTTATAA

Coding sequence (CDS) from alignment at sc0000353_pilon:28311..29729-

>XLOC_011893 ID=XLOC_011893|Name=XLOC_011893|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2838bp|location=Sequence derived from alignment at sc0000353_pilon:28311..29729- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCAGAAGTGACCTGTACGCAAAAAATTGGTCTGAGAATGTTACGTA
CACCTCTGATATTGTCCTGTTTCCAAATAACACTCCTGAGCTCCAAAGGA
TTATAAAGGATGTGCGGTATGCAAAACTGAAAGTTATTGGTACAAGACAT
TGCTTCAACACAATTGCCGATACTGGCCATAACACAGATTTAGAAACGGG
TGAAACTGCTCATATTTGCCTTGAAAATATGACGTTGACTTATTTTGACA
AAGTAGTTATCGGTGGTGAAGAAGATCTAGGTCTACAGCCTGTAGTTACT
TTTGGGGCTGGTATGACTTATTCAAAACTGATTGATATTGTTGATGCAGA
AGGTTTTGCCATTCAGAATCTACCTTCTTTACCCCACATCAATGTTGTTG
GATCAATGATCACCGGCACACATGGCTCTGGTCATAAATATCAAATTCTT
ACAACACAAGTTGTTGCTTTTGATATGGTTTTTGCAAATGGGAAGCTAGA
ATCGTTATCAAAACCAACAACTCCAGATTTTACAAATTATTTGATCAATT
TTGGTGGTCTTGGAGTTATTACTTCAATGACAATTAAACTTGTGCCAACA
TTCATGGTTTCTAAATCTATCTATAAAAATCTGAAATGGGATATACTTTT
TGACAAAAACTATTTTGATAACATCATGCATCACCAAGATTTTCTTAGCT
GTTTCTGTACATGGAAGACTCGTGAAATGAGTTCAGTTTGGGTTGGTAAG
AAATACTATGAAGGAGATCCATTACCAGTGAAAGAAATTGAATACTTTGG
TGCAAAGCATATCACTGGGAATCGAATTCATCCTGTTCCAGGTCGAGATT
CTTCAGTCAATGTAACCACAGGAGTAGGTAAATGGAGAGACAAAATTTAT
CACTTTTTACCTGATAAACCTCCAAGTTCTGCAGGAAATGAAATTCAAAC
AGAGTTTTTTGTTCCTTATGAACACTTTATAAATGCAATGGAAGCTCTTT
ATTTGATTAAAGATAAGTTTCAGCATCTCGTTCAAGTATCTGAATTTAGA
ATGGTGTTGGAGGACAACCTACCCATGAGTCCTGCAAAACATCAAACCTG
CATTGGCATACATTTCACCTGGTGGCGTGAACATGACAAAATCCTTTCTG
TCCTACCATTGATTGAGAGCACTCTATCCAAGTTTAATGTTAAACCTCAC
TTTGGTAAACTATTTCAAATGTCCGGACCAAAATTTGAAAACCTTTACGG
ATCTGATCTTGATAAGCTACGAGCACTTTGTTACAAACATGATCCAACTG
GGAAATTTAGGAATAATTTTATGGAAAAATATATTTTCACATCAAGATAT
GGAAAGATGACAACAGAAGAAGAAGCTGTCTTGTGTAAAAAGCATTTCCC
TATCATATCCAAGTTATAAATGGCCAGAAGTGACCTGTACGCAAAAAATT
GGTCTGAGAATGTTACGTACACCTCTGATATTGTCCTGTTTCCAAATAAC
ACTCCTGAGCTCCAAAGGATTATAAAGGATGTGCGGTATGCAAAACTGAA
AGTTATTGGTACAAGACATTGCTTCAACACAATTGCCGATACTGGCCATA
ACACAGATTTAGAAACGGGTGAAACTGCTCATATTTGCCTTGAAAATATG
ACGTTGACTTATTTTGACAAAGTAGTTATCGGTGGTGAAGAAGATCTAGG
TCTACAGCCTGTAGTTACTTTTGGGGCTGGTATGACTTATTCAAAACTGA
TTGATATTGTTGATGCAGAAGGTTTTGCCATTCAGAATCTACCTTCTTTA
CCCCACATCAATGTTGTTGGATCAATGATCACCGGCACACATGGCTCTGG
TCATAAATATCAAATTCTTACAACACAAGTTGTTGCTTTTGATATGGTTT
TTGCAAATGGGAAGCTAGAATCGTTATCAAAACCAACAACTCCAGATTTT
ACAAATTATTTGATCAATTTTGGTGGTCTTGGAGTTATTACTTCAATGAC
AATTAAACTTGTGCCAACATTCATGGTTTCTAAATCTATCTATAAAAATC
TGAAATGGGATATACTTTTTGACAAAAACTATTTTGATAACATCATGCAT
CACCAAGATTTTCTTAGCTGTTTCTGTACATGGAAGACTCGTGAAATGAG
TTCAGTTTGGGTTGGTAAGAAATACTATGAAGGAGATCCATTACCAGTGA
AAGAAATTGAATACTTTGGTGCAAAGCATATCACTGGGAATCGAATTCAT
CCTGTTCCAGGTCGAGATTCTTCAGTCAATGTAACCACAGGAGTAGGTAA
ATGGAGAGACAAAATTTATCACTTTTTACCTGATAAACCTCCAAGTTCTG
CAGGAAATGAAATTCAAACAGAGTTTTTTGTTCCTTATGAACACTTTATA
AATGCAATGGAAGCTCTTTATTTGATTAAAGATAAGTTTCAGCATCTCGT
TCAAGTATCTGAATTTAGAATGGTGTTGGAGGACAACCTACCCATGAGTC
CTGCAAAACATCAAACCTGCATTGGCATACATTTCACCTGGTGGCGTGAA
CATGACAAAATCCTTTCTGTCCTACCATTGATTGAGAGCACTCTATCCAA
GTTTAATGTTAAACCTCACTTTGGTAAACTATTTCAAATGTCCGGACCAA
AATTTGAAAACCTTTACGGATCTGATCTTGATAAGCTACGAGCACTTTGT
TACAAACATGATCCAACTGGGAAATTTAGGAATAATTTTATGGAAAAATA
TATTTTCACATCAAGATATGGAAAGATGACAACAGAAGAAGAAGCTGTCT
TGTGTAAAAAGCATTTCCCTATCATATCCAAGTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_011893XLOC_011893-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000353_pilongenomesc0000353_pilon:28311..29729 -
Properties
Property NameValue
Aaloc1-1419:1420