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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000353_pilon:227315..234188- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011862 ID=XLOC_011862|Name=XLOC_011862|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6874bp|location=Sequence derived from alignment at sc0000353_pilon:227315..234188- (Clytia hemisphaerica_ch_hm2_pilon) ATGGCCGAAGAAAAGAAATTCTTTAGAAGGGTGAGTTATTTATACTTTTT
ATTATTTTCTGCATTAGGAAACTATAGGAAATACACTATAACATTTTTGC
CGTCATTAGAACTTTGTTTTAAGCTTGACACCTTTTCTAAAGATATTTAT
TTCCATGATATAGAAAGAAGGCAGAAATTTCTAAAAATTTGCACTCGAGC
AGCACAGGATGGGAAGAAAGTTGTTTCTTTTTTTTTTTGAAATGCTGTAC
TTCTTCCAAGCAAATAGTAGAAGATTCTTTAAAAGGAATGTTTTGTTGTA
GATTCTATTTCCACGAGTTCTTAATGATCTGTCCAAATTTTACTGGATTT
CGAAAGTCTAATGGCCGTGGTTTATTTTCATGGTTTTTCAATATCCAGAA
CTGATATAAAAGCTAGAATAACCCTGAGCGACAGTATTTCTCCATTTTCT
ATATTATATAAACGGTTATCAGAAAACTTTTACAGCTTTACAGATGAGAC
ATATTTATTGCAGAATCACGATTTTTAAGGTTTCTTCCGAAAAAAATATT
ACTCAAAGGTTTTTCTAAAGGTTGGTGGCTTTTTAAATGTTTCAAATAAA
GATTTTCCTATCATTGGCATATTTCTCTTTGATACTTTTTTGTTTTTGAA
AACTACTTTTAAAATTTCCCATTTTGTCAAAATTAGCATTAGAGTTTCAA
ATCTTCGAAATTCTATCATAATAAAAATGCTAAAACTTTTATAAAACACG
TGGAAAACAAAAGTAAAATCACTCAGTCAAGGGGTTTAAAGTGAGCATTG
AGGTAGTTAAAATAGATCTCCTAAATTTTATATTGACCACAATAACCGGT
TTTCTCAGTTTCCTTGGAAAAATCTAAGCAGAGTCTATTTTCATGACAAA
TTCATGTGAATTTTCAAAATTGGCTTGCAAAGTTTAAAAAAATGCAGTGT
GTCTGGAAAAAAGCAGAATAAAACGATTTGACCTGATTAGTCCATTCCTG
TTTCAATTACCTAAGGAAGTGAAATGATGAATTTTGAGGATTTTACTTTG
TATAAAATATGAGCTTTGTTTTTTTGATTCGACACCCTGTATACCCAAAG
CTAGGTGTCTAATGAAAAACCAGAAAAACTCAATCAAAATCAATTGATTA
ATCCAGATGACAAAATGAAATGTTTACCTGTAACCATGAATGACCAAAAC
CTGAAAAGAGAAATGAAAAGATTAAATTATTTTTGATAATAAACCCCCAG
AGGAGTGTAAGGGTTGAGGAATGCTGGGTATGTGCGTGGTAGACCTTTTT
ACCCTTAGAGAGGCTGTTTTTTGCTGAAAAGGTGATCTTTTAAAGCTCAA
AAATTTTTGAAGGTCTGTCAAGGTCACTGGATTTAGCTTTTTAGTAATTT
TCGAGATGTATTATATGATTTTCTTTGTAGAATCCTTTCATGCTCCTGAG
CAAAACCTTTTGAAATTTTGGGTTTTGGGACAAAAAAGGTACATTTTCAG
GTGTTCGAAAACAAAAAAGACAAATGGGTTTGACACAGACGTTTTTTCTA
TGAAAACTTATTTGTAAATTCTGACCCTAGGTGCCTCTTTTTTTCTGGTT
TTGTAAGAGTCAGTTAAGGTCCAGGGATTTTTTTATTTAGCTCATTTTAA
GGAGCTTCCAGCTTTTTTAACTTCCAACATAGACATTTTTTGCTAATCAT
TTTGAAACTAAAAAATTAGCAGAGAAAACATTAAGAAAAAGCAGAGGCAC
ATATTGAGATCATGGAACTTGGGCATTTCCACATCGACTCGTGCAATGTT
TAAAAAATTTGGATTTTCCGATATTTTTATTTTTTGGAACATTTTACATT
GTACAGAACATTCTACCAAAGCAACAAGGAAAGACTTGAATAGAGATGTT
TTAATGGGAATAGAACACCTTTGACATAGCTGGAACGCCCCTCCTGGAAT
CCCCCCCTGAGGGAGGGATAAAACATCCAGCAGCAATTGGTACCTAATTT
TAGCCTGTGGCTAGGGGGGAGTAACCATGTTAGGGGTCACCTAAATTTTT
TCAGATGGACCTGGGGGCTAGATTCTATGTTTGGTGATCTTTTTCTGAAC
TTGTTTTTCTTTCATCATAAACTTCACTATGGAAAAATTTGACGTGTCAT
TGGCTTAGGGGTCACCTAAAATATTTGGAAACCAGGGTTACCTAAATCTT
AGGGGTCACCTGAATTCTTAGGGGGCACCTAAAACCTGCTGCCAAGCCAT
GTTTGATGACCTTGACACATGGGCCTGGTTATTCAAAAGTCGATTACTGT
AGATTAAATCACGATTGGCGCTAATCGCCATGGGATCAACTTCTCCTGTT
CGAACGTCAGATTAACTTAACATGTTTCCAAATATTTTCCAAATAGTTTC
CTTATCTTGACGTCACTTTACGAATGTTTCCAAAATATCCTGGGTGTCAG
AGCAGGATTAAAATTTAACTTTTTAATTAGGGTTTTAATCAAGATTTAAA
CCTAATTTTTTCAACTGCTGACGATCAGCACTAATCAATTTTGAGCAACT
GGGCCCTGGACTTTGGTCACCTTTGATGGAATGAAGGTTTCAAGAAAGTC
TTTAAATAGGCAACGGCCCCCGAGGAGATGAAGGCAGAAATTTTCAATCA
TTTCACAGACTTTTTTTCTGATTTTTGTATATATCTTATATAGTGTACAA
GAAAAAACAAAATTTGAATTATAGAACTTCAAGTTTCATCTTTTATGAAT
CGTCAGCTATCAAATAGCTGATAGCTGACGATTCGTAAAAGATGAAACTT
GAAGTTCTATAATTCAAATTTTGTTTTTTCTTGTACACTGTATGAAGCTC
TGGTCCTGATCGTTGAGCGAGCACTCTTTGATGGAATCGTCTATCACTTA
TTGATATTGATATATCTTATATATACTTGAATCTTCATGATGTTTGATCG
TCTAAGATATCAAGCTAAATGGTTCTGGAAGTAGAGGTTAATGATGTGGA
CGCAAATAAAGCTTGAAAAAGGATGGAGAGGTACTTACTTTTAGAAGTTT
TTTGTCCGCCATTTTATTTTATTTCTTTTGCGGACCATGTGGAGCCATTT
GTAAACACGCGTCGATGAGAGACCGTCCTATCCGGGTTTTTTTTTTAACC
TGAATAAACTCCGGATGATCTGATAAACGGAAATGTCCTTGAGGCCATTC
AATTAAGTGGCTCCCTCCCGTGAGTTTGTGGGAGGGGGTAGTAGGTAGGG
TAAGTAGGGGTATATAGTATGTCTGGTATGTGAGGGGTATGTTCAAAGGC
CAAAGTTCGAAAATCGAAAATTTCCCACTTTGATTGAGCCAACATGTTCA
AGGGAATTTACATATGATTTGTATAAAGCCATGGACCCTTTTCTAACCAC
TTTAGGTTCCCGGGGGGTACTAGGGTTGCTAGCTGACAGGGGGTACCACC
CGACTTTCGAACTTTGGACCCTTACCGGGACTAAAAAGGAGGAAACGAAG
GAAAATTTTGGCAATTTTACGACCCTTAGCGGGACAAATTTGACCAATTT
TGACCAAATTTCAATCTTTCTCAGGGGGTAAAAAGTTAGCGGGACAGTCC
AAATAAGGTACCCTTAAGGGCGGCACATACCGTACCCTACATTTGCCTAA
GTACCCCCCCCCCTGGGTTTAGCCTACGCCTTGATAGCTTTTTTAAGTGC
CACATTTCGTGTGCTGTCCAAAAATCACGAAAATTACATTTTTACTTTAG
CGAATTTAACGAAGGTTTTTTCGTGAAATTTATGCAAGGTAGATAAAGAT
GAAATTTTTAAAGAAAAATTGCCTTAAAGCTGATTAATATTCCATGCTTG
AATCCTAATTTCAAATAACTCTTTATTATTTAATAAAGGCAAAAGAAATA
TGTTGGATTCGGAAAAATCCTATTCATCACAATCTCACAGTTTCATTGAT
AGATTTCAATTTTAAAGATTTTTGCCGAAAGTTATAGATGAGATTTAAAT
CAATTCTTGTAACATCTTCAGAAATTGATTTGTGAGTTTTTAACGTTAAC
TTTTGACAAACTTTCGCAAAAGAGCGAAAATAAATCGCGAAAAATTGCGC
AAAAGTTTTCTGTAGTGAATGTCTGTACCAGAGAAGCAGATCAGAGAGAG
ACTTGCATAATATTTGAGATAATTTGCAGGAAATGGCAGAGAATTTGTAA
TGAAAATTACCGAGGGAGGGACTTAGGCAAAAATGGGTGCTGGGTATATG
TGGACAATAAAGGTCGGTTTTTCGCCTTGTAAAGTCTCGAAGGGCTACAA
ATTTTGGAAAGTATCAAAGTAGTCTCTCTAAGGTTGGAAAATCGAAGAAA
GTTTTTCAAAAATGACCACTTCTTCGCAAAAACTAGTCTCCATAAGGTAC
GATATTGAAAGGTCCCACACATAACCGTCATCTGCCAATAACAGTACCCC
CCCCCTTTATAAATTTCGTATAAAAGTTAGCACAAAAAAAAAGCTGTATG
AAAATTTGCCTAAGAGAAAATAAACTCGCTAAGCCTTTGGCAAATATTTT
TGAAATTCAAAACCTTGTGGGATGCATGATTTTTACAAACTTGTAGCATG
AAAAATCCCATCTGACAAAAGTAATTGAACAGGCTCTTGAAAGGCTGGCA
AAAGTCAAAGAACGGAGAAAGTAACTTCAAAAAGCACTAGAGATTATTGG
CAATAATATTGTTTGAAATTAGCAATCTAGTTGAAAGGAGGAGTCATTCA
GGTCTTTACTAGAAATTAGCTACAACAAGACAATAAAATAGAATTGCATA
AGTATTGCACATGAAATTTCAGTATTAACGTCAAAGCGAGGTTGAAATTT
TATTGGTTACAAGTCTTTTTAATACCGTTTTTTTTTTTGTGTGTTCTCAA
AAGTTTCATGAATGGAAATACTGACAGTGCTAACGATGTACTTGATGCAT
TTATTCATTCATATGAAACCAAAACGTCAAGAGCTTGTTAATATGTTATT
ACATACGTATATAGACAAATCCTAAAAAGGAAATTTCATTTACGGTTTTT
AAGGTCAATTTAGTAAAAGACCTTTTTCATTGTCAATGATGTTTTCGTTT
TGACATTTAATATCCTTTATTTGCGTTTTGTTGATACTTGATATGTGGAT
TGTGGAATGAATTCAACTATTCCTTTTTTGTACGAATGATACCAAGGGGT
CGAAAGTTTAAGTGGGAGAGTATTGTTTTATACTTTATGTCCATGTATAG
AATTGTGTGCTCTCCTTCTTCTTGCTTTGAACAATACAGTTTGCATCGTA
AGAAGGTGGTTTTTAAAGGAGGGTTTGATTTTTTGAAACGTAATCACTTT
ATGTTGAAATAGTATGGTATTTCAAGTGCACAAGTTTCATAAGGACGCCA
TAAAGTCTGTTTGTTGCCTTATTAGTTAGAGTCTAGTGGAAAGAGATCAT
TGATATTAAAAGATGTTATTAAATAAAACTCCACTCTCGCTTTTTTAGAT
TTTTATATCCAGAGCTTGCAAAGTTGAGCTTCGTCGTTCATTTAGATATC
AATTCGAATTTTTCTTACATGAAGACATTATTTTGATAGACTTTTGTTTT
TCCTAGCTTGTTCATTTGCACTTTTTAGCTTAGTTTCTAATACTTTCTTG
CTCTCGTTTCAGTTATTTCGCAAAATGGAAAGAACCAACTCAGTCATAAG
TGATACCTTACCTGTCGTCACAGAAGAATCGTACTATCCAGATGGTGCTG
ACGCTTTCGGTGACAGCGTTGAGCCACCTGCAGGGGACATGGGTAACGAA
TCGATCAATACAAATTACGCTTTAGTCGAAAGTGGGAAATCATCCAAATA
TGGAGCCGCCAAGAAGCGCCGCAGCTTCCTTCACTCGAAACAATTCCGAA
GTTTCAGATCTGCATCGCTGAGCGTTTCCATGCTTGAGAAACCGTCTGAT
GATCGTAAAGCGCATGCATTTTTGGCAGGTTGGAACGTCAGTAATTTGAT
CCAAGGAACCGGAATCTTGGGCGTTCCATATGCAGTCCAACAGGGTGGAT
GGGCGGCCGTGGCAATGATCTTCATTGTCGCAATCTTGTGTTGCCATACT
GGTAAACTCCTTATTGAATGCATGTATGAGAAATCAAAAAAGACTGGAAT
CAAGCGACGCCTTAGAGTCAATTACCCTGAAGTGGCCGAAGCAGTGATGG
GCCGTAAAGGACTAGTTATTCTTGGAATCATCCAATCAGTGGAGATGTTC
GGTGGAGTTATCATGTATGTGGTTCTTCTTGGTACCGTCTGGGCAGACAT
GTTTCAAAAATATACAGGACTAGGTATGAAAGAATGGGCAGCTCTTAATT
GTTGCATCAGCTTGCCAACACTGTTTATCACTAAGATGTCTATCGTCTCT
TGGTTATCCATGTTATCTGTCTTCTCATTGATGTCAGCCCTGGTGACTCT
CATCGCGTTTTGTTTCACTCAAATCTCTGTATGGTCGTTGGTCAATGTTC
CACCATTTGATCCACAAACCTTCCCCGTTGGCTTTGGTATTATTGTGTTC
TCATATTGTGCTCATGCCGTCTTTCCAAGTATTGAAGGATCTATGAGAAA
ACCAGAACAGTTTAACGGTATGATGAACTCGTCTTTCCTGCTAGCCGCTA
TCGTCAAAGGTGCTCTCGGTACATTCATGGTTCTAACCTTTGGAAATCTA
ACAGAGGAAGTTGCTACAGTCAATCTAGCTGCTTATCCAATCTGGAGTAA
AGTGGCAACCTTCCTAGTCATCGGTAACGTACTTTTGGCTATCCCCTTGG
GAATGTTCGTCGTCAGTTTAACTTTCGATGATGCCTTTCTAACCTACTTC
CCTCACTTGAATCGTGACTCTAAA Coding sequence (CDS) from alignment at sc0000353_pilon:227315..234188- >XLOC_011862 ID=XLOC_011862|Name=XLOC_011862|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2484bp|location=Sequence derived from alignment at sc0000353_pilon:227315..234188- (Clytia hemisphaerica_ch_hm2_pilon) ATGGCCGAAGAAAAGAAATTCTTTAGAAGGATGGCCGAAGAAAAGAAATT CTTTAGAAGGTTATTTCGCAAAATGGAAAGAACCAACTCAGTCATAAGTG ATACCTTACCTGTCGTCACAGAAGAATCGTACTATCCAGATGGTGCTGAC GCTTTCGGTGACAGCGTTGAGCCACCTGCAGGGGACATGGGTAACGAATC GATCAATACAAATTACGCTTTAGTCGAAAGTGGGAAATCATCCAAATATG GAGCCGCCAAGAAGCGCCGCAGCTTCCTTCACTCGAAACAATTCCGAAGT TTCAGATCTGCATCGCTGAGCGTTTCCATGCTTGAGAAACCGTCTGATGA TCGTAAAGCGCATGCATTTTTGGCAGGTTGGAACGTCAGTAATTTGATCC AAGGAACCGGAATCTTGGGCGTTCCATATGCAGTCCAACAGGGTGGATGG GCGGCCGTGGCAATGATCTTCATTGTCGCAATCTTGTGTTGCCATACTGG TAAACTCCTTATTGAATGCATGTATGAGAAATCAAAAAAGACTGGAATCA AGCGACGCCTTAGAGTCAATTACCCTGAAGTGGCCGAAGCAGTGATGGGC CGTAAAGGACTAGTTATTCTTGGAATCATCCAATCAGTGGAGATGTTCGG TGGAGTTATCATGTATGTGGTTCTTCTTGGTACCGTCTGGGCAGACATGT TTCAAAAATATACAGGACTAGGTATGAAAGAATGGGCAGCTCTTAATTGT TGCATCAGCTTGCCAACACTGTTTATCACTAAGATGTCTATCGTCTCTTG GTTATCCATGTTATCTGTCTTCTCATTGATGTCAGCCCTGGTGACTCTCA TCGCGTTTTGTTTCACTCAAATCTCTGTATGGTCGTTGGTCAATGTTCCA CCATTTGATCCACAAACCTTCCCCGTTGGCTTTGGTATTATTGTGTTCTC ATATTGTGCTCATGCCGTCTTTCCAAGTATTGAAGGATCTATGAGAAAAC CAGAACAGTTTAACGGTATGATGAACTCGTCTTTCCTGCTAGCCGCTATC GTCAAAGGTGCTCTCGGTACATTCATGGTTCTAACCTTTGGAAATCTAAC AGAGGAAGTTGCTACAGTCAATCTAGCTGCTTATCCAATCTGGAGTAAAG TGGCAACCTTCCTAGTCATCGGTAACGTACTTTTGGCTATCCCCTTGGGA ATGTTCGTCGTCAGTTTAACTTTCGATGATGCCTTTCTAACCTACTTCCC TCACTTGAATCGTGACTCTAAATTATTTCGCAAAATGGAAAGAACCAACT CAGTCATAAGTGATACCTTACCTGTCGTCACAGAAGAATCGTACTATCCA GATGGTGCTGACGCTTTCGGTGACAGCGTTGAGCCACCTGCAGGGGACAT GGGTAACGAATCGATCAATACAAATTACGCTTTAGTCGAAAGTGGGAAAT CATCCAAATATGGAGCCGCCAAGAAGCGCCGCAGCTTCCTTCACTCGAAA CAATTCCGAAGTTTCAGATCTGCATCGCTGAGCGTTTCCATGCTTGAGAA ACCGTCTGATGATCGTAAAGCGCATGCATTTTTGGCAGGTTGGAACGTCA GTAATTTGATCCAAGGAACCGGAATCTTGGGCGTTCCATATGCAGTCCAA CAGGGTGGATGGGCGGCCGTGGCAATGATCTTCATTGTCGCAATCTTGTG TTGCCATACTGGTAAACTCCTTATTGAATGCATGTATGAGAAATCAAAAA AGACTGGAATCAAGCGACGCCTTAGAGTCAATTACCCTGAAGTGGCCGAA GCAGTGATGGGCCGTAAAGGACTAGTTATTCTTGGAATCATCCAATCAGT GGAGATGTTCGGTGGAGTTATCATGTATGTGGTTCTTCTTGGTACCGTCT GGGCAGACATGTTTCAAAAATATACAGGACTAGGTATGAAAGAATGGGCA GCTCTTAATTGTTGCATCAGCTTGCCAACACTGTTTATCACTAAGATGTC TATCGTCTCTTGGTTATCCATGTTATCTGTCTTCTCATTGATGTCAGCCC TGGTGACTCTCATCGCGTTTTGTTTCACTCAAATCTCTGTATGGTCGTTG GTCAATGTTCCACCATTTGATCCACAAACCTTCCCCGTTGGCTTTGGTAT TATTGTGTTCTCATATTGTGCTCATGCCGTCTTTCCAAGTATTGAAGGAT CTATGAGAAAACCAGAACAGTTTAACGGTATGATGAACTCGTCTTTCCTG CTAGCCGCTATCGTCAAAGGTGCTCTCGGTACATTCATGGTTCTAACCTT TGGAAATCTAACAGAGGAAGTTGCTACAGTCAATCTAGCTGCTTATCCAA TCTGGAGTAAAGTGGCAACCTTCCTAGTCATCGGTAACGTACTTTTGGCT ATCCCCTTGGGAATGTTCGTCGTCAGTTTAACTTTCGATGATGCCTTTCT AACCTACTTCCCTCACTTGAATCGTGACTCTAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000353_pilon | genome | sc0000353_pilon:227315..234188 - |
Properties
| Property Name | Value |
| Aaloc | 31-1242:1213 |
| Aaloc | 1-30:6875 |
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