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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:165698..169427- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011841 ID=XLOC_011841|Name=XLOC_011841|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3730bp|location=Sequence derived from alignment at sc0000059_pilon:165698..169427- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTCGTTCTTTTCTTATAAAGAAAACCAATTTACGTTTTTCTTCGGT
GACTTGTACAGACAAACGCGGCACAATTTTACCACTTGACGATCTGGAAC
AGAAAGAAGTATTTATAACAGGTAAGCGGAAATTTGTTAAGCGGGATAGG
GGGACTAATCACGCCTTTAAACTGAAACACTCGGCCAAACTATTGTGGAG
CCCTAGAAGGAACTTGCAAAAATATTTCCCCAAATATATATATAGATGAG
ATTAGTAAGTTGAATGAATGAATTGATTGGTTTCAAAAGAATTTCTCGGA
AGATAGAATTTATCGTCTATTTTCGTTTCTTCCAGAAAAAGAGCAACGCC
TCATTGAGGAGGACGAAGATGAAAAGTCTTATTCAACTATCTCGATGTGT
CGAACGCCTATCCCGCCCTATTATTTGAAAAAAATCGAGGAGGGTGGAGA
AGAACAAAAAGAAAGGATGGAAGACAAGCATAACGTTCGAGCGTCCGAAC
AAGGTCGCCCGTCACCCGACTCACCACATTCCAGACACTTTCCGCCACCG
CAAGAATACACATTTCTTCCGATCAAACATATGGGCCACCGTGATCATGA
AGTCCCATCCCGATATGGTGAGTCTATGTTTCTGACCGCATTCTTCATGA
CCCCCGGAATCGAATTAAGGGGGCCATAAAGATATGTCGCCAACCATGGT
TGGGCGACGAAGAAAATTTTCGACTTTTCACCCTTTTCACCCCCGGTGAC
GGGGGACATGATCTTGCTGTCTTTTTACTAAAATTTATTAAGGTTGTATT
TATAGTATGCCATATTGGAAAAAAAAGATTTCAAATCTATTCTTTAGCCG
TGCAGTAAATTTTCTCACCAAATTGTACACTGTTTTGTTCAAGATATGCA
AAAATATATTTTCCTGAAGATGTTTATCTCAAAAAATGTTGAAATGGATT
TTAAGATTTTCACATCTGGTACCTTTAAGATGACATTAAACTGAAATCAT
TTTCTTGATTTTTGGCATAGATAAAGTTAACAGAACTTTGGATTAAAGTT
TTCAAATTTGAAAGGAAAAAATAGATTGTGGAATGACGAATGAAGTAAAA
TTTTGAGTACTTTAAGGAATTAAGTCCTGTCATAAAATATGGCAAAGTAA
ATATTTTTTGCAAAATTTAAGTTCTTTTTTTAGTTTCTGTGGTTTCATTT
TTTTTTTTTTTCTGCAGAGAAGCGATAATTTACCCTACGATTTTGGTATT
TTTGCATTTCTATCCTTTTGAATTTGTGAAATTACTACAAATGTGAGAAA
GTATGACCATTCACAATACAATGAAATTAGATTTTTCGGGTACTGTGCTG
TTCTTCGTAGTTTCTGCGGAAAAACTTTAATTCAAAAATCGGCGAAATTA
TTTTTGCATGCATTTTTTTCTTTTTTTTCGGACACACTGTATAGTATAGA
AATCAAATGTGATTAAATTTCATTTCATTTTAATTTTCTAAAAAAAAGTA
AATCTCCTTTTGACAAATTTCTGTTGTAAATCTTGTCTTATAACTTTTTG
ATTTTCACAGTTAGTTACAGCTAAGATCCGGTTCCCCTTTTCTTGTGAGA
TTTTATGATCTTTTTCTCCTCAGTTGGCCACTTTTTGCAACTACACGCTT
TTCATTATCTTTTTATAAGAATGGTGTAAATCCGCTTCATCAGGAATATT
CTTAACTTTTTTGGGAAGATCATCCTAAAATATTCTTACAGTATTCTTTA
GGTTAGGATCCTAATTCAGGCTAGACTTAAAATACTAATGTACTACATAT
GTACTAAATACATAGGTCTCAAGCATAAAATCGCATTTTTGTGAAAGGGG
TGAAAATGCTCTAAAAATGGCATTCTTTTAAGCTTGAGTAGCAAAATTCC
ATGATGGTGATATTCTTAATTTTTTGGCCATTTTCATCATGGACATTCTT
ATAAAGTGTATTTTTATAAAAAAAGCGTGTAGTTGAAATAGTATTCCTTT
TCTAGATAACACTCCGTCTAAGAAGTCGTTTTTTATTTGAAGGATTTCTT
TCATTTAGAAATAGAATTATAAATCACCATGAAATACCTACAAGAGGTCA
AACCTGTGCAAAGAAAAACAAAACAATAAAATGAAACGAAATTAAAAGAC
AATGAAAATACAATTTGATCATATACAATTTTTTTCCCGATTCTTCAAAA
ACGGGGTACTTTGAAATCGAAGAGAGAAAATATGAACCTTTTTTCCCCTG
AAATTTTTATTATTTACTCAGATCTCAGCAGGGTTGACATGGATTCCTTA
CTATCAAACCTGCACTTTATTAAACCTATTTCTTTTACTTTTTCCATTTG
CGAAAAACTTATTTTTCACAGTTGATAGAGATTTTGTAAAAAACCGATTG
CATTTTTTTATTTCAAATGATTTTCTTGATAACCTCGCAATGACACCTTG
TTTCCTTCCCATGAACCTTGCTAGGGTAACGGAAGCATTTACTTTACGAA
GATCATCTCCCGCTCAAAAATAAACTGGGAGCCAGTTTTCTCTATATGCC
CCAAGACCTTGTTAGCTTTAATTTCTTTGAATGGCGGCTTTTAACTCTCT
AAAGTGGGCCTAGTATGGAAACATTGGAAGGCTGTAAATAGGGGATGTTC
TGTTTTAAGATAATTATCTATGCGTGACTGAGTAGTCAAAACAGAGTTTC
TGCATTCGATCAAAAATATATATTTAATTATTTTCATAAGGTGTAGCTTC
GACTATCACTCAGATCTATAACATTCCTCCGTGTGCAGCTAGCTGTTAGC
CCATTCATAGAACTATAAAGTCATTTCTATTTATCTTTCAATCCAGGCTC
GAGAACACCAGAATATTTCCTACCGCCAAACAATGGACCAATTAGCCACC
ACTCTTATGATCGATTCGCCTCTTATTTCCCATCGCCGCACAGCCCCGAA
GCCATCAATAACAAACATCATAAAATTCCTATCCGTCATTTATATTTTAA
AAACCCGCCACCGCGCTGGAGCCCTAATGAATATGATGGCCGCCTTGTTG
AATCACCCAATTCACAGATAGGATTTTGGCGACAATTACATCCTTTAAAC
TACAGCCATCAGCCATCAATGGATATTGAAAATCCAACCAAAGTGAAATC
ACAAGACGGAGACAGATACGGCTGCTCACAATGCGATAAAGCTTTTAACA
CCGTACACGGGCTAGAAGTTCACGTTCGGCGCTCACACGCCGGTAAGGTG
CGGCCCCATCGTTGCGACTTATGCGGGAAAACGTTCGGTCATAAAATCAG
CTTAGAGCAACACAAGGAGACAATTCATTCTGCTTTCCGTAGTTTCGATT
GTACCGAATGCGGGAAATCATTCAAGCGCTCTTCAACGCTTTCAACTCAC
ATGCTTATCCACAGTAACACTCGCCCTTATTCTTGCGGTTATTGCGGAAA
ACGATTTCACCAGAAATCGGATATGAAAAAACATACCTACGTTCATACGG
GGGAACGTCCTTACAAATGTGGAGCTTGTAATAAATCATTCAGTCAATCT
TCAAACTTGATCACTCACATGCGAAAGCATAGTGGTTTTAAACCATTTCA
TTGTGATTTATGCTCAAGAGAATTTTACAGGAAAGTTGATCTACGACGCC
ACTTGTTCATTCATCATAAAGACTTTATTGTCAGTAGAAATGCTACTGGA
ATAGTAGGCAACGAAAAACTTGTTCGATAG Coding sequence (CDS) from alignment at sc0000059_pilon:165698..169427- >XLOC_011841 ID=XLOC_011841|Name=XLOC_011841|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2574bp|location=Sequence derived from alignment at sc0000059_pilon:165698..169427- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTCGTTCTTTTCTTATAAAGAAAACCAATTTACGTTTTTCTTCGGT
GACTTGTACAGACAAACGCGGCACAATTTTACCACTTGACGATCTGGAAC
AGAAAGAAGTATTTATAACAGATGCCTCGTTCTTTTCTTATAAAGAAAAC
CAATTTACGTTTTTCTTCGGTGACTTGTACAGACAAACGCGGCACAATTT
TACCACTTGACGATCTGGAACAGAAAGAAGTATTTATAACAGAAAAAGAG
CAACGCCTCATTGAGGAGGACGAAGATGAAAAGTCTTATTCAACTATCTC
GATGTGTCGAACGCCTATCCCGCCCTATTATTTGAAAAAAATCGAGGAGG
GTGGAGAAGAACAAAAAGAAAGGATGGAAGACAAGCATAACGTTCGAGCG
TCCGAACAAGGTCGCCCGTCACCCGACTCACCACATTCCAGACACTTTCC
GCCACCGCAAGAATACACATTTCTTCCGATCAAACATATGGGCCACCGTG
ATCATGAAGTCCCATCCCGATATGAAAAAGAGCAACGCCTCATTGAGGAG
GACGAAGATGAAAAGTCTTATTCAACTATCTCGATGTGTCGAACGCCTAT
CCCGCCCTATTATTTGAAAAAAATCGAGGAGGGTGGAGAAGAACAAAAAG
AAAGGATGGAAGACAAGCATAACGTTCGAGCGTCCGAACAAGGTCGCCCG
TCACCCGACTCACCACATTCCAGACACTTTCCGCCACCGCAAGAATACAC
ATTTCTTCCGATCAAACATATGGGCCACCGTGATCATGAAGTCCCATCCC
GATATGGCTCGAGAACACCAGAATATTTCCTACCGCCAAACAATGGACCA
ATTAGCCACCACTCTTATGATCGATTCGCCTCTTATTTCCCATCGCCGCA
CAGCCCCGAAGCCATCAATAACAAACATCATAAAATTCCTATCCGTCATT
TATATTTTAAAAACCCGCCACCGCGCTGGAGCCCTAATGAATATGATGGC
CGCCTTGTTGAATCACCCAATTCACAGATAGGATTTTGGCGACAATTACA
TCCTTTAAACTACAGCCATCAGCCATCAATGGATATTGAAAATCCAACCA
AAGTGAAATCACAAGACGGAGACAGATACGGCTGCTCACAATGCGATAAA
GCTTTTAACACCGTACACGGGCTAGAAGTTCACGTTCGGCGCTCACACGC
CGGTAAGGTGCGGCCCCATCGTTGCGACTTATGCGGGAAAACGTTCGGTC
ATAAAATCAGCTTAGAGCAACACAAGGAGACAATTCATTCTGCTTTCCGT
AGTTTCGATTGTACCGAATGCGGGAAATCATTCAAGCGCTCTTCAACGCT
TTCAACTCACATGCTTATCCACAGTAACACTCGCCCTTATTCTTGCGGTT
ATTGCGGAAAACGATTTCACCAGAAATCGGATATGAAAAAACATACCTAC
GTTCATACGGGGGAACGTCCTTACAAATGTGGAGCTTGTAATAAATCATT
CAGTCAATCTTCAAACTTGATCACTCACATGCGAAAGCATAGTGGTTTTA
AACCATTTCATTGTGATTTATGCTCAAGAGAATTTTACAGGAAAGTTGAT
CTACGACGCCACTTGTTCATTCATCATAAAGACTTTATTGTCAGTAGAAA
TGCTACTGGAATAGTAGGCAACGAAAAACTTGTTCGATAGGCTCGAGAAC
ACCAGAATATTTCCTACCGCCAAACAATGGACCAATTAGCCACCACTCTT
ATGATCGATTCGCCTCTTATTTCCCATCGCCGCACAGCCCCGAAGCCATC
AATAACAAACATCATAAAATTCCTATCCGTCATTTATATTTTAAAAACCC
GCCACCGCGCTGGAGCCCTAATGAATATGATGGCCGCCTTGTTGAATCAC
CCAATTCACAGATAGGATTTTGGCGACAATTACATCCTTTAAACTACAGC
CATCAGCCATCAATGGATATTGAAAATCCAACCAAAGTGAAATCACAAGA
CGGAGACAGATACGGCTGCTCACAATGCGATAAAGCTTTTAACACCGTAC
ACGGGCTAGAAGTTCACGTTCGGCGCTCACACGCCGGTAAGGTGCGGCCC
CATCGTTGCGACTTATGCGGGAAAACGTTCGGTCATAAAATCAGCTTAGA
GCAACACAAGGAGACAATTCATTCTGCTTTCCGTAGTTTCGATTGTACCG
AATGCGGGAAATCATTCAAGCGCTCTTCAACGCTTTCAACTCACATGCTT
ATCCACAGTAACACTCGCCCTTATTCTTGCGGTTATTGCGGAAAACGATT
TCACCAGAAATCGGATATGAAAAAACATACCTACGTTCATACGGGGGAAC
GTCCTTACAAATGTGGAGCTTGTAATAAATCATTCAGTCAATCTTCAAAC
TTGATCACTCACATGCGAAAGCATAGTGGTTTTAAACCATTTCATTGTGA
TTTATGCTCAAGAGAATTTTACAGGAAAGTTGATCTACGACGCCACTTGT
TCATTCATCATAAAGACTTTATTGTCAGTAGAAATGCTACTGGAATAGTA
GGCAACGAAAAACTTGTTCGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:165698..169427 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 406-1287:883 |
| Aaloc | 124-402:3394 |
| Aaloc | 1-120:3731 |
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