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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:69112..73236- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011837 ID=XLOC_011837|Name=XLOC_011837|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4125bp|location=Sequence derived from alignment at sc0000059_pilon:69112..73236- (Clytia hemisphaerica_ch_hm2_pilon)
ACCTTGTCTACAAGATGGTCAAAAAGAATTTATGTAAAAACTAATAGTAA
GTGAAAAAAGTGACAAATAAGTTTGGCGTTGTGCACTGGGCACCTCCCTC
TATAGTTGGAAATTTAAAATTGTGAAATCATGAAATCTGTATCTGACAGT
TACATCAATATGCCAAAAACATTTTGTTCGACCACCTTTACTTCAAGCAA
CGACCTAATAAAATAGATAGACCAGTATCCTATTGAAATGATCTGCGTAA
GAATGATAAAAAATTTAATGATTTTTTGCATCATTAAAATGTCATTCCGC
ATGCAAAAGCATTTTTTTAAGATTAGCTATTGGTTGATATTGATCACATG
ACCTAAATTTTGTGAACCTGTTCTTAATTTCAAGTCAAACTTTTAGGCTT
AAAAATTAATAAACATTGTTAAAATTATAACATTTGTATTTGGATAGTGT
TTGTGTTTTCTATCTTAAGAACACACATTTATTTTCTTAGTTAGAGTCTT
TCAAAAATGTTTATGTTCTTAAAGAAAATGCGCTGAAAAGCGCAACAGAA
ATATTGAAAAATATCTTGTGAGAAAGATGATTAAAAATGCGATCTGACGT
AAGCAAAAAAAAATCGAACATTATGTTTATGGTCAGTAGAAATTCGATAT
AATTGATTTTACACCATTTAGAGATGCTTGTAAAAAGTCTAATTTCTTTG
TAATATGACTTACGCGGACGGCGGAAAGCCGGCAAGATGAAAGAATACAA
AATGAATAGAAAACAAAAGATTTCTAAGAGCCATTGTATGATCTATTTTA
TTAAGTCGTTGCTTCAAGATAGGCTACCATAGAATGAACTTCCTTTTATA
GGATGAACCATATTCATGTAGTGGCTTTCAGCCTTGCACTCCATCGCAGA
GGCAAATCAATTTTAATGACTTTTTTGACTAATGACCAACTTAAAATTTT
TTAATTTTTTTATATTTGAGTATTAAAAAGGCATGCATTCAAATAATAAA
GGTTTAAAATTTTTCTCTGGGCTGGTTAGTAAAATATCTCAAATAGGCTC
TGTGATGGAGTGCAAGGCTGAAATTTTTACAAAATCGCGCACGTGAACCA
ATTTTAGCATGCACAATTTCGTACAAAACGCCCTTAGATATTTTTTTATA
GAATCAAAGTATAATTGACGTGCGCAATTTTTCGCTCACTATACAAGATT
GACGAGCGTTTTACTAAGCGTCTTATTGAAAAGCATGAACTTGTCCCCCT
TTATAACTGACGGCCGCGGTCGCCTGTCATAAAGAGTGGGCGCCAGTTAT
AAAGGGCGGCCGCCTTTTTCGAAGGAAAAGGGTGACCACTTATTATAAAA
GGCGGCCGCCAGTATTATAGGCGGCCACTCTTTGTAAAAGGCGGCCACTC
TTTGTAAAAGGCGGCCGCGGATTATAACTGGCGGCCGCCTTTTAAAAAGA
CTAAAAACTTCGAATTACCAGATCAGCCACGGTAATTTACTAATATAGAA
GTTATATAATTTTTACATAGATTGTGATCTAAAGAAACTTCCACTGCGAG
GAAAAGATGGTGCAAGGGTTGTAGACGCAAAATATCATGCACATAAATTA
CGTTGTGAAGAATCAGAGACAGTGTTCTTAAAAAGGTACCTTTTTGAAAG
TATATTGAATGTTGCCCCTTTGGACCAAAATCGAAGGATAATAATGATGA
TGCATTGTTATCAATGGTTTTACGTTTATTTAAATTTGATTAATGAAAAG
AAAAAAATATTACAACTACTGAAAACTCTGGAAAACTCCCTACCGTTTCT
GGAGAACCATACTAAAGTTCTGTGTTCAATTTGAATGTTTATTCTATTGA
ACAACAAATAAGATGATCTTTTGGTATTTACAAACTTTTCTTTAAAGCCA
AAGTTTCCCCTGATCAAGTTTGTCTTTGAAAATGTTTTCCTTGATTTAGA
GTTTTATTTTATTATAATTTTCTTTGATTTGAAACTAAATGTGCTTATGA
ATAATTCTTCTAAAATTTTTTATTTTAGGGAGAAAGGTTTGGAAAAGCAG
TGTAGATACAAATGTAAAAGGTTTGATGTATTTATTTTCTTAATTTTATT
CTTTATCTCCCAGCTTGAAATACCTTTTCCAGCTTTATTCCATTCCTTCT
CTTAGTTAGCGGCCCTAGCCTCTCTGTTTGATGCTCGCAGCAACTAAAAA
GGGGGGTCAAGGCTAAGCTGAGAAATACACTTTCGACTGCCCTCGACTGC
AGTCAGAAACTTATTTTACTTAAAATTACTCCAAGTCTCTATATTACTTG
TGCACCCTCCTACTAATCAAAGGGGGTTTTTGATTTCATTTTACTATACA
GAACTCTCTTTTAAACTCATTAATGTTATGTCTATTTATATTTCTCCTTT
TCTTGCTAGGTGTGGCCTGCTATTGTTCTCTCGACACGATAAAAAAACCA
AAATTACTTTCATCGTTGATGGTAAGTTTATCGTCCATTCGTGTGAGGAA
TTCAAAGTGAAAAAATTTAAAATTTTACCTAAGTATAAACTAGCAGAATA
TGTATGACAATTTGAGGATGCTTTTTTCTTGATGTTACATTTTTCATATT
CAGGGGCTGTTGTGAAAGGTAAGACTGAAGAGAATCCCTCACTATTGAAG
AAACAACCGCAAGCTAAAAAGGTTAGTATGATTATAGTGGAGTCTCCATA
ACTTGAACTCGCACGGGGAACACAAATTTGTCCGAGTTAAAGAAATTTCG
AATTATGGAGTAAAGTTTATAAGACATTGTTGATTAAAGGGACCAGGAAA
CTTGTTCAAAGTCTTTCAAGTTAAGGAGACATTCGAGTTATAGAGGTTCA
AGTTATGAAAACTCCACTGTACAATAATTAATTTCTCTACAGCAAGCCTC
CCCACTATTTTAAACCAATTTCAATACTGTAGCATCCTTTTTCAACCTGC
AATTGACTTCGGGTCGTTTGAAGGCACCCCATCTGGTTATAGAATTTAAA
AAGACTTTGATTGAACCTTGCCTGGATATCATTTGAACCAAACAATTTGA
GTAGTGGAGACAAATGAAGTTCTTGTTTATACCCAATTACCAAGTAAGCA
AAAAGAGTATTTGTATAAAATTCAGCAATGAGCACTCTCGGGTACCTAAT
AAGTGGGGGGGGGGCGCTAATTAGTTTTTCGAAAGTTTTCCACCCAGGAC
ATTCTTATTCCAACCCTCCTCCCCCCGTTTATTAGGTTTTAAGAATTTTT
CCACCCCCCGGTTCCACCCACCCTGCTTATTCCAAACCCCCTGCTTATTA
GGCATCCGAGAGTATTTTTGATATAGATTTTGATTAGTATAGTGCTTAAT
GAAGACCATATACAAATTAAAAATTATATCTTTTAAAAATCACCAAAAAA
AAAAAAATGAAAAACCATGAAAACGAAAAACCATAAAAACGTAAATTAAC
TTGTCACTCCATTTTAACAACAAATTTAGGTTATGGTAAAGAAACATACG
AAAGAAATGGGGAAATTTGGATCAGTCACTGTTTCAACCGTCGATGAAGA
AGAAGAAGAACTAGAAGCTGTAAGTGATGTCTATTTTACAGACCAAACTA
TTTCCTGACTAAAAAATTATCTCCCTCCAAAAGTAAAGTATACCAAGGTT
GAACTTATAAACAGAAATAATGCGTTAATTAGCGTCCATTCAGGTCCTAA
AACTCTTTATAGTGGCTCAATCTCACCCCGCCTTAGCAAGATTGTGAATC
CAGTTGATCTTGTGTCAACTTTATAGATAGGATTGAAGTTAAAAGTTGAT
ATTGATTAGCCTCGAGCTAAGTACAATTTGGACTACTTTACATCAACTTT
AAAGAAAAGAAACATAAACACATAAACTCCTCGGCTAAACGTCTTAGACT
ATGATCCTTTCGTAGATAGATTTCTACTCTTTGTTTGAAACTTAAAGGGG
CTTTCAAAGAATATATTTTTTTTTACGTTCAAAGGCTGAAATCGCGTCTT
CTTATGCACAAAATGCAAGGATCATTTCCCAACAATTAACAAAGAGAAGA
ACAGCTCAACAAAAACTTACAGAAGAAGAGGCAGGAAAAGCAAAGAAACC
ACGTGGTACACTGATCGACAAATGA Coding sequence (CDS) from alignment at sc0000059_pilon:69112..73236- >XLOC_011837 ID=XLOC_011837|Name=XLOC_011837|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000059_pilon:69112..73236- (Clytia hemisphaerica_ch_hm2_pilon)
ACCTTGTCTACAAGATGGTCAAAAAGAATTTATGTAAAAACTAATAACCT
TGTCTACAAGATGGTCAAAAAGAATTTATGTAAAAACTAATAATTGTGAT
CTAAAGAAACTTCCACTGCGAGGAAAAGATGGTGCAAGGGTTGTAGACGC
AAAATATCATGCACATAAATTACGTTGTGAAGAATCAGAGACAGTGTTCT
TAAAAAGATTGTGATCTAAAGAAACTTCCACTGCGAGGAAAAGATGGTGC
AAGGGTTGTAGACGCAAAATATCATGCACATAAATTACGTTGTGAAGAAT
CAGAGACAGTGTTCTTAAAAAGGGAGAAAGGTTTGGAAAAGCAGTGTAGA
TACAAATGTAAAAGGGAGAAAGGTTTGGAAAAGCAGTGTAGATACAAATG
TAAAAGGTGTGGCCTGCTATTGTTCTCTCGACACGATAAAAAAACCAAAA
TTACTTTCATCGTTGATGGTGTGGCCTGCTATTGTTCTCTCGACACGATA
AAAAAACCAAAATTACTTTCATCGTTGATGGGGCTGTTGTGAAAGGTAAG
ACTGAAGAGAATCCCTCACTATTGAAGAAACAACCGCAAGCTAAAAAGGG
GCTGTTGTGAAAGGTAAGACTGAAGAGAATCCCTCACTATTGAAGAAACA
ACCGCAAGCTAAAAAGGTTATGGTAAAGAAACATACGAAAGAAATGGGGA
AATTTGGATCAGTCACTGTTTCAACCGTCGATGAAGAAGAAGAAGAACTA
GAAGCTGTTATGGTAAAGAAACATACGAAAGAAATGGGGAAATTTGGATC
AGTCACTGTTTCAACCGTCGATGAAGAAGAAGAAGAACTAGAAGCTGCTG
AAATCGCGTCTTCTTATGCACAAAATGCAAGGATCATTTCCCAACAATTA
ACAAAGAGAAGAACAGCTCAACAAAAACTTACAGAAGAAGAGGCAGGAAA
AGCAAAGAAACCACGTGGTACACTGATCGACAAATGAGCTGAAATCGCGT
CTTCTTATGCACAAAATGCAAGGATCATTTCCCAACAATTAACAAAGAGA
AGAACAGCTCAACAAAAACTTACAGAAGAAGAGGCAGGAAAAGCAAAGAA
ACCACGTGGTACACTGATCGACAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:69112..73236 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 424-564:142 |
| Aaloc | 334-423:647 |
| Aaloc | 268-333:1521 |
| Aaloc | 205-264:1716 |
| Aaloc | 163-201:2097 |
| Aaloc | 49-159:2604 |
| Aaloc | 1-45:4126 |
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