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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000366_pilon:287459..291806- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011834 ID=XLOC_011834|Name=XLOC_011834|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4348bp|location=Sequence derived from alignment at sc0000366_pilon:287459..291806- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTCCATCTCTTATATCTATGTAACAGAAAAAAAGACATGACCGT
GCTTACAGACTCGCAACTAAAAAGACTTAAAGATCATAAATATTGCTCAG
AAGGCAAATCGGCATTGGAGGTTTTCTTCCAACCTTTTTGGAACTATGTT
GTCAGTAAAATGCCACTGTGGGTGGCCCCAAATTTGATCACCATCTCTGG
ACTAATTATCAATGTTTTAACCAGTGCTTTGATATTGTTGTATTCACCAA
AGGCAGATTCTGATGAGGTGGGTATTATTCACATTTTTTGCATATATAAA
TTTTGTGACATTTTCCTTGTGTGTTTTCATTATCCATTTTCCTATAAACT
TTGTGCTAGGTTTGCAAAACACTCCCCTGTCAACCATCTGTTTTGTTTGA
ACAAATCTGTTTGCAATCAACAATCATTTCTTTTCTAGGTTCCTGGTTTG
GTCTTTATCCTCTGTGCTATTGGTCTTTTCCTGTACCAGACCCTAGATGC
AATCGATGGCAAACAAGCTAGAAGAACCAACACTTCAACTCCAATGGGTG
AACTCTTTGATCACGGATGTGATGCAGTATCAACCCTATTCTTATCAACC
TCAATAGCATGTGCATTGTCTTTAGGAACATATCCTAGATACTTGTTCTT
CTTTTTCATCAATAATGTGGCTATTTTTTATCTGGCACATTGGCAGACGT
ACTGTTTTGGAAAGCTGATGTTTGGTTTGTAAGGATCCTCTTTAGTCTTT
TAAATAGGAAAAGATACAAGATGAGAAGTTAATCAAGTCTTTAAATAACC
CATCCCCTGCAGCAATAACTTTGGTTTCGGCTCTACCTTATTATCCTCTA
ATGCATTTACACATCTCTCAAAAATCTTCATCTGTTTGTTTTGTGTGTTT
GCCTCTATCAATATTTTCCCATCCAACATAATCAAGCATATCACATACCT
ACTGTTAACTTCGAATTGAATTCTCCACCACAAGACAACAATTCAAACTG
GAATCCTTGGATAATACCTCTTTTACTCATTCCATAGGATTGATGTTACA
GAAGCGCAAGTCCAAGCAATGGCTATCTATGTTTTTGCTGGTATTTACGG
ACCACAGTTCTTCAGACAAGAAGTAAGAAATGCGTGATTTAAGACTAAGT
TAGATTTTATTGGTGCAGAGCTAGAACCATTCCATCTGAAATTAGAAGAG
TCCTTTAATTCAAACTTGCTATCCTTTAAAATGGTCTAAATGGCCCAAAT
CAATATTTGTATTTGTAGTGTTAAAAATACTTCCGTCTCAGATGGACTTT
CGTCTCAGCATCTCACTTTCTTTCTTTGCAGGTTTCCTCTCCCTTTAATG
AATTCTTTAAAATTATTTTTCACTATTTCTTAAACTCTGAAGACTCAATC
CCAGCCAACCAATTGCAAATGCCAATTTTGTTACATTATGGAACCGCCAC
TTTTTTAAACCAGCAACAGTTTTTTATTGACCCACCAACATGGAGAAACT
AAATTTCTAAAAATCCCAATAAAACATAATGTAATCACAAGTTAGTGGAA
ATGCCCTGTTGTTGGCTATATGCCCAAGGTTCTCACAATATCAAGCTATT
AAAAGACTTAAAACATAAAACTGATGCTGAATAGACCTTTTCATAAATTA
CGTTACGAACATCACTTGCCTCGTTTTGAAATTATTGCCATAGTGATTAA
CTCACAGCGGATTTTATTAAAACGACTTTCTATTCATAAAAAAACTATTT
AATAATGTTTCAAAGGACATGATCACCATGGTATTTGTTTAGATATGAGG
CAAGTGATGTTCGTCACGTAATTTATGAAAAGGTCTATTCTTTTCATTGT
TTTCTAAGTATACTTTCAATGTTTCAGGTGATGGTCCTACAGTTTCGAAT
GCCACTCGCAAAGCTTTTAGTATACGTCTGTGCATTCACTGCTGTCATAT
ATACACTCACAGCGTTCCGAAAAATATTCAAAGGAGGTGCCGGTAAAAAT
GGTACCACAGTTGCGGTATGAACGTTTTTGTTTTGATAAATCTTCAATGC
TCTGATAGCTGATTCATTTTTAGGTTTGATTATACGTAGTAATTTTTTAG
CTGCAATTCTTATTATTAACGCAAGGTTTCAAATTTTGTTTTCATATTTC
ATATTTATAGACAACAAGTGTGTTGACACCAGTAGTACCTATTGGCATCG
TCATCGCATGCGCATTCTATGTCTACAAACATAGCACAGACAACCTGTTT
CATACATCACCAGTACTCATCATGATGATGTTTGGGTTTTCTACAGCTAA
AATTACTTGCAATCTTGTGGTAAGTCTTTGGCTTGACTAATCAAGTATGA
ATGAGTACGACAATCTAAAGGCGAAAGGCAAATCTTTCAAAAATTACTAT
GGCTCAAGCATTAACGCAATACTTTGCGTTAAATAATTTAAGTAGTTATG
TAAGTGTGATGAAGTACACCATTTTGAAAAAGTGAAATTATATCAATCCT
CTGTAATGATATTTGCCAAATGGCCGTACTGCGGTGAAAGGTATTTAGCT
ATGGCAAAACCATCTGTTAATAAGTACTAGCATCCTTTCTTATCACCATC
TTTAAATACACCTTTTCGACCGTTGCCACCAATTGACGCGCGGGCATTTT
TTGTCCGATTTATCCCACTAAAACCGTCCCAGTCCTTTTCTCGCACCTAT
TGACAATAGAAAAATGTGTCAAAAAAGGATTGGATCGAGTTTAGTGGGAT
AAAGCGGACAAGAAAATGCCCGCGCGGCAATTGGCGGCTAAGGTCGAAAA
GGTGTATTCCTTACATATCAACCAACTTTGCTAAATGCAGTGGAGTCTAA
CTTAAATATGCGCTTTGTTTGAGTTTTAAGGAAATGTCAAGTTTTTGAGT
AAATTTTATGAGGTTTTGTCAACTGAAGGGATCAGAAAACGTTCGATTTA
AGGAGACATTCGAGCTGTAAAGCTTCGAATAATGGAGACTTCATGGCTCC
GCCCCCCCCCCACTTATTTGGGGGGGGGGTGTAAATCTCAAATTGGCTTA
AAAGTGGGTGGGAGCTGTCTCATTTTTTAAACTCAGGGGGGACCTAAAAA
AAGTGGGAGGAGCTGAAGGGCTACACTAAAGTTCTGGGGAGCTAATTAGG
AAACTGTAAAATACCCCCTCACTATTGTTTTGGTTAATAAGTTAAGGATT
TTTCTATTGAATTTATTATCTCTTACATTCTATCAAAATGTAGGCTAAAA
TGGCAGATTTCTACCCTTAAAATTCAAAATTTCTTCTCTTCCTCAGTTGG
TTGACATCCCATGTTGATACGTAAAAAAACTAGTAATAATACTACCAGAA
ATGACAGTAGCTTTTTTTGCTGGGACCTGAACCTTGAAAGCAATTTTTGC
AGGGACTTGAACCTTTATATTTCAACTGGGACCTGAACCTTACTGAAAAG
TGGGGGGAGCTAAATCATAGGAAGGACCTAAATTTGTTTGGGGGACCTAG
AACCCCATTCGGAGCCATGGACTTCACTGTATTTACAATTGTGTAGATAT
TGATATATTATGTAGACTTGTGAGAATTTTGATTAACATACTCATTCTTT
TCGATTTCAGATCGCTTCAATGTCAAAATCACCATTAGATATGCTCGACT
CTACAATGTTGGGGCCAATATCTTGGCTTGCTTCAATTATTTCAGTGTAC
AAAGTCTACTTTCTTATGTGGCACTTGATTCAGTAATCACAGAATACGTT
TTTCTATTAGCTCTTTTTGTAAGTAATTACTTCTTCCTTTCTTCAATTTA
ATGGTCTGAAAACCGTCTTAAGGGCATCCTCCTTTACCTCCTGTCATCAT
TATCGGATGTTTATTCTTTGGGTGATATTTTTGCAGTTACAGTCCACTCT
CTCTCTAATTCGAACCTCCATTATTCGAATATTTCTGTAATTCGAACTAA
AATATTGGTCCTCTTCAGATGGGGGATGGTATAAGTTACTCTTCGTAATT
CAAATCTTTCTCTAGTTCGAAGAAAACTTTTGGGCCCTTGAAGATCAAAT
CAGCGAGAGTCAATTATATACTTTTTGAAATATTTTCAAGCTTTTTGTAA
ACGTCATGCTGTGTTTATTATGTATTCATCAAAAAATATTTATAAGGTCT
CCAAAAATTAAAGCCAGTCATACAATACATGCATAAACTCTTGTTATTAT
GTTAGAAAATTTACTTTAACTTCTTCTTCTACAGGTATACAGTGTTTTGA
ACTTTGTGGTGTTCAGTGTGCAAGTGTGCCAAGAAATCAGTGAAAATTTT
GGTATTGCCGTTTTTACTATTCCTTATGAAAAGGAAAAAGATGATTAA Coding sequence (CDS) from alignment at sc0000366_pilon:287459..291806- >XLOC_011834 ID=XLOC_011834|Name=XLOC_011834|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2422bp|location=Sequence derived from alignment at sc0000366_pilon:287459..291806- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATTCCATCTCTTATATCTATGTAACAGAAAAAAAGACATGACCGT
GCTTACAGACTCGCAACTAAAAAGACTTAAAGATCATAAATATTGCTCAG
AAGGCAAATCGGCATTGGAGGTTTTCTTCCAACCTTTTTGGAACTATGTT
GTCAGTAAAATGCCACTGTGGGTGGCCCCAAATTTGATCACCATCTCTGG
ACTAATTATCAATGTTTTAACCAGTGCTTTGATATTGTTGTATTCACCAA
AGGCAGATTCTGATGAGATGAAATTCCATCTCTTATATCTATGTAACAGA
AAAAAAGACATGACCGTGCTTACAGACTCGCAACTAAAAAGACTTAAAGA
TCATAAATATTGCTCAGAAGGCAAATCGGCATTGGAGGTTTTCTTCCAAC
CTTTTTGGAACTATGTTGTCAGTAAAATGCCACTGTGGGTGGCCCCAAAT
TTGATCACCATCTCTGGACTAATTATCAATGTTTTAACCAGTGCTTTGAT
ATTGTTGTATTCACCAAAGGCAGATTCTGATGAGGTTCCTGGTTTGGTCT
TTATCCTCTGTGCTATTGGTCTTTTCCTGTACCAGACCCTAGATGCAATC
GATGGCAAACAAGCTAGAAGAACCAACACTTCAACTCCAATGGGTGAACT
CTTTGATCACGGATGTGATGCAGTATCAACCCTATTCTTATCAACCTCAA
TAGCATGTGCATTGTCTTTAGGAACATATCCTAGATACTTGTTCTTCTTT
TTCATCAATAATGTGGCTATTTTTTATCTGGCACATTGGCAGACGTACTG
TTTTGGAAAGCTGATGTTTGGTTTGTTCCTGGTTTGGTCTTTATCCTCTG
TGCTATTGGTCTTTTCCTGTACCAGACCCTAGATGCAATCGATGGCAAAC
AAGCTAGAAGAACCAACACTTCAACTCCAATGGGTGAACTCTTTGATCAC
GGATGTGATGCAGTATCAACCCTATTCTTATCAACCTCAATAGCATGTGC
ATTGTCTTTAGGAACATATCCTAGATACTTGTTCTTCTTTTTCATCAATA
ATGTGGCTATTTTTTATCTGGCACATTGGCAGACGTACTGTTTTGGAAAG
CTGATGTTTGGTTTGATTGATGTTACAGAAGCGCAAGTCCAAGCAATGGC
TATCTATGTTTTTGCTGGTATTTACGGACCACAGTTCTTCAGACAAGAAG
ATTGATGTTACAGAAGCGCAAGTCCAAGCAATGGCTATCTATGTTTTTGC
TGGTATTTACGGACCACAGTTCTTCAGACAAGAAGTGATGGTCCTACAGT
TTCGAATGCCACTCGCAAAGCTTTTAGTATACGTCTGTGCATTCACTGCT
GTCATATATACACTCACAGCGTTCCGAAAAATATTCAAAGGAGGTGCCGG
TAAAAATGGTACCACAGTTGCGGTGATGGTCCTACAGTTTCGAATGCCAC
TCGCAAAGCTTTTAGTATACGTCTGTGCATTCACTGCTGTCATATATACA
CTCACAGCGTTCCGAAAAATATTCAAAGGAGGTGCCGGTAAAAATGGTAC
CACAGTTGCGACAACAAGTGTGTTGACACCAGTAGTACCTATTGGCATCG
TCATCGCATGCGCATTCTATGTCTACAAACATAGCACAGACAACCTGTTT
CATACATCACCAGTACTCATCATGATGATGTTTGGGTTTTCTACAGCTAA
AATTACTTGCAATCTTGTGACAACAAGTGTGTTGACACCAGTAGTACCTA
TTGGCATCGTCATCGCATGCGCATTCTATGTCTACAAACATAGCACAGAC
AACCTGTTTCATACATCACCAGTACTCATCATGATGATGTTTGGGTTTTC
TACAGCTAAAATTACTTGCAATCTTGTGATCGCTTCAATGTCAAAATCAC
CATTAGATATGCTCGACTCTACAATGTTGGGGCCAATATCTTGGCTTGCT
TCAATTATTTCAGTGTACAAAGTCTACTTTCTTATGTGGCACTTGATTCA
GTAATCACAGAATACGTTTTTCTATTAGCTCTTTTTATCGCTTCAATGTC
AAAATCACCATTAGATATGCTCGACTCTACAATGTTGGGGCCAATATCTT
GGCTTGCTTCAATTATTTCAGTGTACAAAGTCTACTTTCTTATGTGGCAC
TTGATTCAGTAATCACAGAATACGTTTTTCTATTAGCTCTTTTTGTATAC
AGTGTTTTGAACTTTGTGGTGTTCAGTGTGCAAGTGTGCCAAGAAATCAG
TGAAAATTTTGGTATTGCCGTTTTTACTATTCCTTATGAAAAGGAAAAAG
ATGATTAAGTATACAGTGTTTTGAACTTTGTGGTGTTCAGTGTGCAAGTG
TGCCAAGAAATCAGTGAAAATTTTGGTATTGCCGTTTTTACTATTCCTTA
TGAAAAGGAAAAAGATGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000366_pilon | genome | sc0000366_pilon:287459..291806 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1099-1212:115 |
| Aaloc | 1003-1098:677 |
| Aaloc | 997-999:680 |
| Aaloc | 940-996:739 |
| Aaloc | 781-939:2189 |
| Aaloc | 643-780:2472 |
| Aaloc | 559-642:3311 |
| Aaloc | 268-555:3911 |
| Aaloc | 1-267:4349 |
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