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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000059_pilon:31119..34275+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011826 ID=XLOC_011826|Name=XLOC_011826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3157bp|location=Sequence derived from alignment at sc0000059_pilon:31119..34275+ (Clytia hemisphaerica_ch_hm2_pilon)
cagccaaaaagtttaccagaaataaaaaaaatgtttaataaatctaaatc
aaaaagaaattatcgATCACGGAAACAACAAGAGCAAACAAATGAAGAAT
CTGAAGAAACTAAACAGACCGAAAATGAAGATGATGTTGATGGGACAGAA
GAAggggaagaagaagaaagtgtTTTAACTTCATTACAAGAACGCAAAGA
ACTGCAAAGTTTTCGGAAAAGACAAACAGGTGTTAGTGCCGAATCGCTAC
TTGTAGGTGAAAAAGTTGAACAGAAAAAAGAAGGAGGTATCTCTGAtcct
tttaaaatcaaatcagGCGGAGGACTAACCGAGATGTCGGCAACAGCTAA
AAAAGTGACACAAGTTTCAGAGCTAGGTACAGCGTTTTCAACTGAAACTA
ATCAGAGAGACGAGGATGttcaattgttgaaatatattgaagaAGGTTTG
AAGAAGAAACGTGGTGCTGatgaagaaacaacatcaaataATGAAATGAA
GTGAGTTTTCATGTTTTCGTAACGTAACACTGTTCTTAATTATAATCTTA
AAGCATATCTTAGCTCAGAATTTTGTATTAGAATGACTCTTATAatcttt
taagtttttaagcGAACTAACTCAGATgcttaatttcaaaaaagaaatgt
aaTCCTTAGAAGGAATGAATTCTTCCTTTTAGGTtctttgatttgcactg
ctctttgatttgcactgctctttgatttgcactgctctttgatttgcact
gctctTCCTTCAAATATAGTTTGCTTTTTATTATATTCGAACCTTTATCT
CTAAACAAGCTTTCCCTTTCAAACAAACTCTATAAACCAGTCTCCATTGA
ACAAACTACGCTAACTCCGTTAGTGTTAGAGTCATGAAGACTCTTGTTTT
TCCTCTTCTTAAAAGTTGTATTGTGTTGTTGGCAGACTTTTTCAACTAGA
ATTTTATTTCAGGTCATAGGGGGTAACACAGTTACTCGGAAATAATAGGT
TTAACTTTGAACATGATCTCATAGATTCACTGCTTTCCTCCCGATCTGAT
TAAGACACAGTTCACCTccattagcctatttcatagaatTCATACATCTG
TTACATGCTAAAATTTTCTATTAAATTTTAAATGGGGGAAGTGCATAAAT
CTGTCCCTTCATCATTCAATTGACTTGGGAATTAGAGAACTTTTTCCATT
GTTGTTGCTTTTGTAAAACTTATAATCTCAATTTGGAAAAGAGTGCTtat
aggttttgtttttaagtaagagtgatatcgtttgcttattcatcattttt
aattcacaagctttttcacattggattgacacggatgtggagcaagattg
gtctaaaagaagaaaataacaatagacagacactgtcctgatatgaaata
tgtgcctgatatgaaacggggacactatgtaaaaataaaacctttaatca
tAAAAACTGCAGTGATGTAGAAAAATATGTTCtaaaaacacgaatcctat
gaaataggctaatatCACTGGTGGTAAGttgtggaaatatcatatttatg
atatgcatcattgtcttctgacattacatcacggacccaatagctcattg
gttgtgttattgtaagtgacgtaaaatcagtcaatacgtcactttcaacc
aatcagctgttgggtccgtggaaggcattgtaatggtgcatatcatgaat
actcaTTACGCGTGGTTACTTCAATTTCTCAGGCTGTCATCTAAGGAGAG
TCAACTATTCCAAGTACCAGACAACATCAATGTCAAATCAAAGATCATGA
AATCTGAAGAAATGTTATCAAGTCAAATGTTATCTGGTATTCCAGAAGTT
AATCTAGGTAAGATTTGGTTCCTCTAATGAAATTATGGAGTTGTATATTA
AGATCTATACAAACCATGAAAAATATCCACCACATACAATGAATGATTAA
GAGAATTGAAATACGCTACCTTAAGAGAATCAAAAATCGTAATAGATAAA
TTTGGTGAGAGACTATTTTGttgaataatgttttttttgattttagcaag
aATTAATTTCATTGATGGTAGGGTAAATTATTCCTCTTCTTCCTAAAAAT
TAGCCTTTTcaacaaaatatgtttttttagaaaattatgaaaaagtgaCA
GGTTATTCTAGCCAGGCAATAATTTATactaattttgacaaatattatCT
TACCAAATGAAGTTCTCTTGCGGCATGATATTCAGTGTTTGAGGGATACC
CggggggggATACTAGGGTTGGCAGAtgaggggtactagggttggcagaT
GAGGGGTAACTGCGGATGGGACCTCCGAAGACCgagccttagagagactg
atttttctgaaaaggtggccgttagagagacttttttgaaaaattctttt
ctacaattttttcactttaaataaaaaaaaattcctaaaaatcgtgaatt
tttgagagactttgaagggtgaaaaagccgacccttaccgtctgcacata
cacagcacccatttttgcctaagtacccccctctCCCTGGGAGGGATTCG
GGGGAGGGATTTAATAAAAACGTTAATTAGTGGTAGTGATTGATAGTGTA
GATAACAAGCGTCCGAGATTAAATTCGAACAATTATCAAAGTGGTATTTG
AGGTCAAATGAAGGCCTCAGGTTTAGATTTAGATATAGACCCTTCATTTA
CAATACTCATCAAAATTTCGTCTACCATTATAAAgaattttattatgttt
ttttatgaccAGGAATCGAAGCGAAAATCAAGAATATTGAAGCAACAGAA
GAAGCCAAAATGAAGATGATTGATGACAGTAAAAACAAACGGCGTGAAAG
CTCAGATTTCGTGCCTACTAACATGGCATCAAACTTTATGCACCACAATC
GGTTTTATAACGAGAAAGCTATTGTTGATAAGGAGCgaaagaaagagcaa
aagaaaaaagaattagaaagTGTAACTGTTGTTGATAAAGGACCAACCGT
TGGTAAAGAAATTGTTGAGAATGATGTCGATACTAAGTTTATGAACAAAG
CAATGAATGCAAGTCAAAATAAAAGGAAAGATAAACCTTCAGATACTGTC
GATGATTATAtgtttgaaaactttaaaaagaaagCGAAAGAAGGCCGTTG
GAGGTGA Coding sequence (CDS) from alignment at sc0000059_pilon:31119..34275+ >XLOC_011826 ID=XLOC_011826|Name=XLOC_011826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2040bp|location=Sequence derived from alignment at sc0000059_pilon:31119..34275+ (Clytia hemisphaerica_ch_hm2_pilon)
cagccaaaaagtttaccagaaataaaaaaaatgtttaataaatctaaatc
aaaaagaaattatcgATCACGGAAACAACAAGAGCAAACAAATGAAGAAT
CTGAAGAAACTAAACAGACCGAAAATGAAGATGATGTTGATGGGACAGAA
GAAggggaagaagaagaaagtgtTTTAACTTCATTACAAGAACGCAAAGA
ACTGCAAAGTTTTCGGAAAAGACAAACAGGTGTTAGTGCCGAATCGCTAC
TTGTAGGTGAAAAAGTTGAACAGAAAAAAGAAGGAGGTATCTCTGAtcct
tttaaaatcaaatcagGCGGAGGACTAACCGAGATGTCGGCAACAGCTAA
AAAAGTGACACAAGTTTCAGAGCTAGGTACAGCGTTTTCAACTGAAACTA
ATCAGAGAGACGAGGATGttcaattgttgaaatatattgaagaAGGTTTG
AAGAAGAAACGTGGTGCTGatgaagaaacaacatcaaataATGAAATGAA
cagccaaaaagtttaccagaaataaaaaaaatgtttaataaatctaaatc
aaaaagaaattatcgATCACGGAAACAACAAGAGCAAACAAATGAAGAAT
CTGAAGAAACTAAACAGACCGAAAATGAAGATGATGTTGATGGGACAGAA
GAAggggaagaagaagaaagtgtTTTAACTTCATTACAAGAACGCAAAGA
ACTGCAAAGTTTTCGGAAAAGACAAACAGGTGTTAGTGCCGAATCGCTAC
TTGTAGGTGAAAAAGTTGAACAGAAAAAAGAAGGAGGTATCTCTGAtcct
tttaaaatcaaatcagGCGGAGGACTAACCGAGATGTCGGCAACAGCTAA
AAAAGTGACACAAGTTTCAGAGCTAGGTACAGCGTTTTCAACTGAAACTA
ATCAGAGAGACGAGGATGttcaattgttgaaatatattgaagaAGGTTTG
AAGAAGAAACGTGGTGCTGatgaagaaacaacatcaaataATGAAATGAA
GCTGTCATCTAAGGAGAGTCAACTATTCCAAGTACCAGACAACATCAATG
TCAAATCAAAGATCATGAAATCTGAAGAAATGTTATCAAGTCAAATGTTA
TCTGGTATTCCAGAAGTTAATCTAGGCTGTCATCTAAGGAGAGTCAACTA
TTCCAAGTACCAGACAACATCAATGTCAAATCAAAGATCATGAAATCTGA
AGAAATGTTATCAAGTCAAATGTTATCTGGTATTCCAGAAGTTAATCTAG
GAATCGAAGCGAAAATCAAGAATATTGAAGCAACAGAAGAAGCCAAAATG
AAGATGATTGATGACAGTAAAAACAAACGGCGTGAAAGCTCAGATTTCGT
GCCTACTAACATGGCATCAAACTTTATGCACCACAATCGGTTTTATAACG
AGAAAGCTATTGTTGATAAGGAGCgaaagaaagagcaaaagaaaaaagaa
ttagaaagTGTAACTGTTGTTGATAAAGGACCAACCGTTGGTAAAGAAAT
TGTTGAGAATGATGTCGATACTAAGTTTATGAACAAAGCAATGAATGCAA
GTCAAAATAAAAGGAAAGATAAACCTTCAGATACTGTCGATGATTATAtg
tttgaaaactttaaaaagaaagCGAAAGAAGGCCGTTGGAGGTGAGAATC
GAAGCGAAAATCAAGAATATTGAAGCAACAGAAGAAGCCAAAATGAAGAT
GATTGATGACAGTAAAAACAAACGGCGTGAAAGCTCAGATTTCGTGCCTA
CTAACATGGCATCAAACTTTATGCACCACAATCGGTTTTATAACGAGAAA
GCTATTGTTGATAAGGAGCgaaagaaagagcaaaagaaaaaagaattaga
aagTGTAACTGTTGTTGATAAAGGACCAACCGTTGGTAAAGAAATTGTTG
AGAATGATGTCGATACTAAGTTTATGAACAAAGCAATGAATGCAAGTCAA
AATAAAAGGAAAGATAAACCTTCAGATACTGTCGATGATTATAtgtttga
aaactttaaaaagaaagCGAAAGAAGGCCGTTGGAGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059_pilon | genome | sc0000059_pilon:31119..34275 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 628-1020:2765 |
| Aaloc | 502-624:1734 |
| Aaloc | 1-498:1 |
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