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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3833184..3838241- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011807 ID=XLOC_011807|Name=XLOC_011807|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5058bp|location=Sequence derived from alignment at sc0000001_pilon:3833184..3838241- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTATGCTGGAACACGAACCACCATGAAATTGGAGTTTGGTGGAGG
CTATATTACTGAAGAAATCTTTGCAACATTAAAAGTATGTAATCCAAAAC
TTTATATTTGTTTTGTTAAACTTCTACTGTCATTAATAATTATTTTTATC
ACTATTATTTCAATTTTCATGTTAAATTCTTCTATAAAATGATCTTCAAG
AAGGTTAGTTTAAATAAAATCTCTTTGTTAAAGTGAAACTAGTGATAAAA
TTAAGCCTAAAGCACCGACTTAAGTCGTAACATCTTTTTATTAACCTTTT
AGTTTCTGATACCTCTTAATGAGCACTCCTGGCTTTTCAAAAGAAATGAA
CCTAGGAGAGTTTTTTGCAAGTTTTTATTTTTTTCATATGGATTTAAATT
CTCCTAAGAAAAATCTCCTTAAATTTATTAATTTAAATATCCTAGAATAA
TTGTGTCAATTAAAAGATACCATTGCTTTTTCTATATTTAAATTTTCTAA
GTTTGTAATGACTGTCTTTTCTTGCTAGAGTGATGTTACATTGAGAGGGT
TCAGAGAGCACAAAGATTTGAAAGCTGCAGACGCTCCAATGACTTACCAA
GAAGAAGAATTGAAAGAAGTCAAACAGGTTGGTGACCTTTTTTATGGAGA
AATTTACTGGTATAATGCAATAAGTCTTAACGATTCTCCTATTCTTTCTT
TCTTCTTTCTACCCATGTCTCGACATCTACGAAACTTAAAGGGATAATCA
GATGGTTTGAGATTTTCTGCCTGAAGAAAACTTGTGTCGTTTTGGGTAAA
ATTACCAAGTTTTTTTGTCTAACTATATTCTTAAGTCGAGATATCACAAT
TTAAAATTTCTGAAAATGGGTTTCACACGATATTAACGTTGTTAAATACC
ATTCTTTCTTACTAAAAGCCAAAAACTTGTAACTTAATTATCTCGACATT
GGGAAATATTTAGGCAAAAATATTTTGATCTTTGGCTCAGGACAATAGAA
GGATTCCACATGCCAAATATCCCAAACCACCTGACTATCCCTTCAATCAA
GGGGCGAGTTTCGCCCTGAGTAAAAAAGGCTGATATTAAATCTTATTAAA
TCTTTCTAACAGATGCATATTAGCGCTGCTGCCACCACCAAAGCCAGCAC
TCTTCCAGGGGTCAGTTTCCCAATGAGTGAAGAAGCCATCAACGAACTGG
TCAGAATCGCCTCCAAAGAAGTCTCCTACGTTCAACTGGTAAACTTATCT
CCTCATATCTCCTGATATCAGACCATAATCCCTTCCTTTTAACCCAGGAA
AACATTGGTAAAGGACTTTATATACAGTGCTTATTCGTGAACTTAGGGGA
TGTTTAAAGGGAGTCAAAATTAAAGAGATTACATGGTTACACTTTCGACT
GAATTCTTATTCGTCGTCTCCACGAATTGAAGTTGCTTTTTGGACCTACC
TCGGAGGTCCTATAAATTAACCCATGTCCGTCCGTTCGTCCCTCCGTCTG
TTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTCTGATTTTTGGCA
CAAAGATGCAAAATGGCAATGCCCAAAATGTGATGGAGCCCAATTTTCGA
AAAAAAAAAATTGCCGGAAAAACTGTTTTTTTGGCATTTTCTCGAGATTT
TATCATATATACTTTTTTCTGATTTTTTGCTCAAAGATGCGTATTAACAG
TGCCCAAAACAAACATGGCCGAGTCCGATTTTTGAGAAAAATTTTTTCCA
GCCGAAAATGCCGGTAATATGCCGGTAATCACCGTTTTTCTGGATTTTTT
TTCTTATAATTGGTTGTTTTTTCATTCAAAAACATTATTAATAGCAATGC
CCACCATCAAGCATGTTTCAATTTTCAAAAAAATTGATTTTTGAAGCCGG
AAGTATTCAAAAATCGCCGGAACAACCTATTTTCGCCGGAAAGACAGTAT
TTCTTGAATTTCTTGAGCTGTACTTTTTTAGGAAATTTTGCACACTGATG
CAAAATGACAATAGCTAAAATGTGACAGAGCCCGATTTTCGAAAAACATT
TTTTTCCAACCGAAAATGCTGGAAATATGCCGGAAAAACCGGGTTTTTTA
CATTTTCTCGAATTTTCATCCTTAGTTTTTTCTGATTTTTTTCAGAAAGA
TGCGTATTCGCAATACTCAAAACATGACCGAGTTTGTTTTTTTGAGAAGA
CTTCTTTTCCGGCTGAAAATGCCGGAAATATGCCGGTAATAGCCGTTTTT
ACAGATTCATTTGACATTTTCCTTATTTCTTTGTTTTTTTCACACAAAAA
CATTATTGATAACAATGCCCACCATTAAGCATTATTCAATTGTCAATAAA
ACTGATTTTTGCAACCGGAACTTTCTAGTTCTCTCCTCCCTGCTCCCCTT
CCCTCTTCCCCCATCAACAATTAATGATAAAATTTAATGTGTTATGCATT
TTCGCAAAACGCTATATCGCCTGACTGATTGTTTTCATTTTTCTCCTTAT
TGCTATCTAGCTTTCATCATCAGGTAGGTCCATTCAGTATGTTGATTGTT
CTTAAATGAAAATGATTAAACAGATACAATGTATGCGTGGTTTGTGTATA
AAATATATGAAACAAATTAACAGATAATTACTGAATTCATCACTTGCCTG
AACTTCAATTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTATAA
ATTAACCCATGTCCGTTCGTCCGTTCGTCCGTCCGTCTGTTACCAGCTTT
TCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGGTGCAA
AATGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTA
TTTGGCCAAATTTGGGCCAAAAACTACCTAAAAATAGGATTTTTTGGACT
TTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGTACAAAGATGGAG
GTTAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAAAATTCTT
ATTCGCCTTAAAAAACGGATTTTCGTATTTTTGGGGAAATTCCCTTTAAC
CAAATAAGAAAATATAGCTTTTATCAATGTTGACTCATTATTTTTTTCTG
ATTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGACGGAGCC
AGATTTTTAAGGAAATTTTTTTGGGGCAAATTTGGGCCAAAAACAGCTTA
AAAGGTTTTTTGGGCCTGAATGGTTTAATTGATTTTCGTATTTGGGGAAA
TTCTATTTTACCATTTTACATTATTCAACACACAATCTTTATTTATCCAT
TCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCATCTGATG
TTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTCTATTTTAGTCG
ATAGATGTTAACAAAGAGATGATCAACCTTGAGAAAACTTGTGATATCGA
AACCAGCAAGCTTGCAGGAGAAGTGCCTACTGACAAACCAAGATACCATT
TCTTTCTGTTCAAACATACACACGAGGGAGATTATCTGGAATCCATAGGT
CAGTCTTCATACTTAAGATGATGAACTTTACTCCTCCAATTCATGAGTAA
AATAGAACTTTTTAGGTACTATAGTAGAATACCGGCTGCGGATTTTAGTT
GCGCACTTTTAGACCTAAATTTAATAGATAAATCTTGTTGGAAGAAATTT
CAAGATTATTGCTTCAGGTCTTTTACCAATTCTTCAAAAAAGGCTCTTGT
CAAACAAAGTACCCTTTAAATCAAAAATGTTTTAGTAAGAGTCGATCAAA
GAGTTAGTGTTTAACATTATTTTCAATTCCCTTTCAGTTTTCATCTACTC
CATGCCTGGTTATGCGTGTTCAGTCAAAGAGAGGATGTTGTATTCCTCGT
GTAAAGCCACCCTACTCTCTGGATGTGAAGACGTACTCAAGATGGAGGTC
ACTAAAAAGGTGAGATTGCTTTCACCTGTAGGGCTATTCCTGAATAATAA
ATTTACTCCCTATGTTGAAGAGGTCATATTTTCCATCCCTATAAGCGACC
CTTATATACTTGGAAAATTAGGGGATCTCTGAAACTTTGCTAAAAATCCA
GACGGGTTTGACTCTCCAAAAATTGACCTCTTCAACATAGAAGATACGTC
TTATAGCTAGTTAAACGCCGTATCTTTACAATTCCGAAGGAATTCTTTTT
TATCAGGTGAGATCGAAAAGTATAATAAGAGGACTAAGTACAGCCAAGAA
GAGTCCTTATTTGTGATGTAAACAACTTTTTGGCAAAGATAGACGGAAGT
TTTAAGTTAATAATGTCCAAGGTGTTTATTGGGTATTTGGTTTGGTTTCA
CACATGTTTAAAGAAATATAATTTGTTACTGAAACATTTTTTGTGGCCTA
CAAAAGATTTAGTTTGTCCGTCGTTATAAAGCTCAATTTGCGGCATATTT
GCTGAAACTGGACTGAATAGGAATATAAGTGCTACGTTTTTTTGAGAAGA
TTATAAACAGTCAAGTCTCGAAAACTCGAAGCAAATCAAATATCTGGGGG
GAGTACACTAGGTTTAGATGTCTGCGCAAAGTTCGAAAATCGACACTTTG
AGAGATTGAATTTCGAAAATTTTGCCCCTTTTGATGTTTTCATGACCCTT
TGAGAGACTTATTTCTCATTCTCTGCCAATTCTTTCTAACTTTGATCCAA
ATTACGAGGGTTTATGATCCTGTGAGGGATAGGGAGTCGATCTTTGATAT
TTGGTAACTTTTGGACCCAGTCAGAGACTGAATTTCTAATTTATGGTTTC
GTACACCTGTGAGAGTCTAAATAGCTCTCCCCAAAAATCTCTATCACTCG
AATTATTTCTGCGTTCCCTTGTACGTATGATGACTTGAATTTATATTTTT
AGCTGGAGATATCTGAAGGTAGTGAATTAACGGAAGAATTCTTACAAGAC
GAACTTCACCCAAAGAAAAATTTACATCGTCCCAAATTCTCAAAACCAAA
GCCACCCTCAAGAGGAGCTAAACGAATAATCAAACCGTCTGCTAATGCAG
AAAGCTAG Coding sequence (CDS) from alignment at sc0000001_pilon:3833184..3838241- >XLOC_011807 ID=XLOC_011807|Name=XLOC_011807|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000001_pilon:3833184..3838241- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTATGCTGGAACACGAACCACCATGAAATTGGAGTTTGGTGGAGG
CTATATTACTGAAGAAATCTTTGCAACATTAAAAATGTTGTATGCTGGAA
CACGAACCACCATGAAATTGGAGTTTGGTGGAGGCTATATTACTGAAGAA
ATCTTTGCAACATTAAAAAGTGATGTTACATTGAGAGGGTTCAGAGAGCA
CAAAGATTTGAAAGCTGCAGACGCTCCAATGACTTACCAAGAAGAAGAAT
TGAAAGAAGTCAAACAGAGTGATGTTACATTGAGAGGGTTCAGAGAGCAC
AAAGATTTGAAAGCTGCAGACGCTCCAATGACTTACCAAGAAGAAGAATT
GAAAGAAGTCAAACAGATGCATATTAGCGCTGCTGCCACCACCAAAGCCA
GCACTCTTCCAGGGGTCAGTTTCCCAATGAGTGAAGAAGCCATCAACGAA
CTGGTCAGAATCGCCTCCAAAGAAGTCTCCTACGTTCAACTGATGCATAT
TAGCGCTGCTGCCACCACCAAAGCCAGCACTCTTCCAGGGGTCAGTTTCC
CAATGAGTGAAGAAGCCATCAACGAACTGGTCAGAATCGCCTCCAAAGAA
GTCTCCTACGTTCAACTGTCGATAGATGTTAACAAAGAGATGATCAACCT
TGAGAAAACTTGTGATATCGAAACCAGCAAGCTTGCAGGAGAAGTGCCTA
CTGACAAACCAAGATACCATTTCTTTCTGTTCAAACATACACACGAGGGA
GATTATCTGGAATCCATAGTCGATAGATGTTAACAAAGAGATGATCAACC
TTGAGAAAACTTGTGATATCGAAACCAGCAAGCTTGCAGGAGAAGTGCCT
ACTGACAAACCAAGATACCATTTCTTTCTGTTCAAACATACACACGAGGG
AGATTATCTGGAATCCATAGTTTTCATCTACTCCATGCCTGGTTATGCGT
GTTCAGTCAAAGAGAGGATGTTGTATTCCTCGTGTAAAGCCACCCTACTC
TCTGGATGTGAAGACGTACTCAAGATGGAGGTCACTAAAAAGTTTTCATC
TACTCCATGCCTGGTTATGCGTGTTCAGTCAAAGAGAGGATGTTGTATTC
CTCGTGTAAAGCCACCCTACTCTCTGGATGTGAAGACGTACTCAAGATGG
AGGTCACTAAAAAGCTGGAGATATCTGAAGGTAGTGAATTAACGGAAGAA
TTCTTACAAGACGAACTTCACCCAAAGAAAAATTTACATCGTCCCAAATT
CTCAAAACCAAAGCCACCCTCAAGAGGAGCTAAACGAATAATCAAACCGT
CTGCTAATGCAGAAAGCTAGCTGGAGATATCTGAAGGTAGTGAATTAACG
GAAGAATTCTTACAAGACGAACTTCACCCAAAGAAAAATTTACATCGTCC
CAAATTCTCAAAACCAAAGCCACCCTCAAGAGGAGCTAAACGAATAATCA
AACCGTCTGCTAATGCAGAAAGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3833184..3838241 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 583-738:157 |
| Aaloc | 463-582:1220 |
| Aaloc | 310-459:1662 |
| Aaloc | 184-309:3947 |
| Aaloc | 85-183:4531 |
| Aaloc | 1-84:5059 |
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