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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000285_pilon:77845..80212+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011693 ID=XLOC_011693|Name=XLOC_011693|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2368bp|location=Sequence derived from alignment at sc0000285_pilon:77845..80212+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAatgttgattttgaatttttctgcaGACTTTTGAATGGCAACAC
TTATCATCAGATAAGTCAAATTCTGAAAGACAATTACCCAGGCGAAAGAG
GATTTTCAGTTCCTTCGATTAAATTATTTTGCAAGAAAAATGGCTTATCG
TCGAAAGTTTCTCAAGAACAGGTTAATGAAATGGTGCGAGTTGCTGTTGA
TGAGGTATAGTTTTTTAATAGACGACTACCATATAATTCTATATATTGTA
AGCATTTGTATTGGAATCATGGACCACTTCAGGGACTTACTTAACCAGGG
CGTTCTATGACCAATCTTTTACTTTAGGACTTTTTGATTTGCAATGAAAG
GGGAGCAtgtaaaaatgtgaaaatgtgAAGTTTAAAAAGGACAGGAAAAA
TATCTGCAAACAGACCTTGAATTAAATGACGAAATTTCTGTATGATAACA
ATAATACGATTTCCAGTTTTAACGTtgattaattatttttctttgaaagg
ttGGTCCTGCTTATGGACGAAAAATGATGACAGGATATCTCAGGCAAAAA
CACAGCCTCGCAATTGGAGAGACAAGAATCAGCAAAGCCCTATCCACTGT
TTCTCCTGTTTACACTGCTCAAAGGAGAACTCAAGCAAGAAGAGCAATCA
ACCCAATACCTTACAGGGCAGATTATTTCGGCCACAAACTCCATATGGAT
CAAAACGAGAAGCTGGTTATGTATGGAGTTACCCATGTAGCAGCCATTGA
CGGGCACAGTCGCTTTGTCGTTGCAACTTCAACCATGCCGGTGAAAAACA
ACTTGACCATTTACAGAGAGATCTATAGGTttgtttcattagattttttt
ttacttagatTTTAATATGTGTCGAGGATAAAATATGAATTACAGTTTGT
AACGACGCTAAGTGGCGTCACCCAGTTTTTGTTAGAGGAATAAGGTCTCA
CAGTTAAGGTaggtattatttttatttcaggcAGACATGTACTGACTATG
GGATGTTTCACCAGATTCGTGTTGATGGTGGTAAAGAATTTTACCTCACT
TTGGGAATGCAGGATATTTATGGCCACTTGAGGTCTAGGCAGGATATTGC
AAAATACAGACAAACTCAATCTAAGCAGGTatgttattttgatattttct
tgtaATCATTATTTACTTATTTTGCTTTTCAATTTACAAATGAATAATTT
GGTATAATTTTCACGcttcacaagcttctgattttTCGATTCAAGTTGAT
AGATATTCGTGGTATTATTCATGACGTAACTTTTATACGGAAGAACCCAT
TAAAATTCCATAATTTACCACCCCTCCTtttgttttaaacttttatAGGG
TACTTCCGGTTAAGTGAGAATCAAGAATAACTATTACCTCTAGGCTTCCC
ACATTCCCTTTTtacctttcaaagaaaaaaatgttttgtacaGAAGGTTT
GCAAAATTGATCaggaaataaagaaataaataaaagtaaaaatcatcTAC
CAAAGGGATTTCTAGGAAGCCCGGTTTTTATCATAAAATCACACTTCTTT
GCAATCGTCTGATTtcatttctacattttttcGATTAATTTAGAATTTAC
CAATCGAAAGATTCTGGCCTGAAGTTAATATCAGAGTAAATTATCCGATC
AAAGCTATATTAGTCCGAATGGATAATAATGGAAGCATAAACATGGCGTG
TGAAGTTCAAAAGTTTTGTGTTTCGTTCGTTTCCTGCGCTGTTTCTGGAT
ATGGAATTAATGTTGTTGCTAAATCTTGGAATCAACATACAATTCCAGGT
CAGATTTGTCTCATTTCATTAAAGAATAATAACtatgcacgctttttttt
ataagaatggtgtaaatccatttcatttAGGCTGATAATACTTCgttgtt
tataaaaatgtgtacTAGAACAATCGGAAACTAAGTGCTGCGCTTTTTAC
TATGCTTATTATATTCATTCTCCATGTCAATGTCAATAACactaaaaata
caaatttttaggCCAACAGTCTTTCAGCAAAcgtgtatttttattttata
ggaCGAGGAAAGCCTGCCAATATCAAGGAAAACACTAACCAACTGCAACC
AATAAATCATGCTAATTTACCCGAAGCGCTTGAGGCGAAACAGGAATATG
AAACTCGTTATGCTGGTCAGTTAGTGGATGAGCATGCATTTGGTATCGAT
CCTTTGCAAGGTTTCAATGATCAGAAGGCACGGAGATTAGGAGAATTTTC
ACAGAGATTTCGGATTAAGTCTTTATTTGAAGATTGCATCAACAACCGAC
CACAATCCTTTGAAAATGCTGTGTTATTTTTTATTCGTAAAACGCACGAA
CTGGTACAAGGCGTCTAG Coding sequence (CDS) from alignment at sc0000285_pilon:77845..80212+ >XLOC_011693 ID=XLOC_011693|Name=XLOC_011693|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000285_pilon:77845..80212+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAatgttgattttgaatttttctgcaGACTTTTGAATGGCAACAC
TTATCATCAGATAAGTCAAATTCTGAAAGACAATTACCCAGGCGAAAGAG
GATTTTCAGTTCCTTCGATTAAATTATTTTGCAAGAAAAATGGCTTATCG
TCGAAAGTTTCTCAAGAACAGGTTAATGAAATGGTGCGAGTTGCTGTTGA
TGAGATGGAGAatgttgattttgaatttttctgcaGACTTTTGAATGGCA
ACACTTATCATCAGATAAGTCAAATTCTGAAAGACAATTACCCAGGCGAA
AGAGGATTTTCAGTTCCTTCGATTAAATTATTTTGCAAGAAAAATGGCTT
ATCGTCGAAAGTTTCTCAAGAACAGGTTAATGAAATGGTGCGAGTTGCTG
TTGATGAGgttGGTCCTGCTTATGGACGAAAAATGATGACAGGATATCTC
AGGCAAAAACACAGCCTCGCAATTGGAGAGACAAGAATCAGCAAAGCCCT
ATCCACTGTTTCTCCTGTTTACACTGCTCAAAGGAGAACTCAAGCAAGAA
GAGCAATCAACCCAATACCTTACAGGGCAGATTATTTCGGCCACAAACTC
CATATGGATCAAAACGAGAAGCTGGTTATGTATGGAGTTACCCATGTAGC
AGCCATTGACGGGCACAGTCGCTTTGTCGTTGCAACTTCAACCATGCCGG
TGAAAAACAACTTGACCATTTACAGAGAGATCTATAGgttGGTCCTGCTT
ATGGACGAAAAATGATGACAGGATATCTCAGGCAAAAACACAGCCTCGCA
ATTGGAGAGACAAGAATCAGCAAAGCCCTATCCACTGTTTCTCCTGTTTA
CACTGCTCAAAGGAGAACTCAAGCAAGAAGAGCAATCAACCCAATACCTT
ACAGGGCAGATTATTTCGGCCACAAACTCCATATGGATCAAAACGAGAAG
CTGGTTATGTATGGAGTTACCCATGTAGCAGCCATTGACGGGCACAGTCG
CTTTGTCGTTGCAACTTCAACCATGCCGGTGAAAAACAACTTGACCATTT
ACAGAGAGATCTATAGgcAGACATGTACTGACTATGGGATGTTTCACCAG
ATTCGTGTTGATGGTGGTAAAGAATTTTACCTCACTTTGGGAATGCAGGA
TATTTATGGCCACTTGAGGTCTAGGCAGGATATTGCAAAATACAGACAAA
CTCAATCTAAGCAGgcAGACATGTACTGACTATGGGATGTTTCACCAGAT
TCGTGTTGATGGTGGTAAAGAATTTTACCTCACTTTGGGAATGCAGGATA
TTTATGGCCACTTGAGGTCTAGGCAGGATATTGCAAAATACAGACAAACT
CAATCTAAGCAGAATTTACCAATCGAAAGATTCTGGCCTGAAGTTAATAT
CAGAGTAAATTATCCGATCAAAGCTATATTAGTCCGAATGGATAATAATG
GAAGCATAAACATGGCGTGTGAAGTTCAAAAGTTTTGTGTTTCGTTCGTT
TCCTGCGCTGTTTCTGGATATGGAATTAATGTTGTTGCTAAATCTTGGAA
TCAACATACAATTCCAGAATTTACCAATCGAAAGATTCTGGCCTGAAGTT
AATATCAGAGTAAATTATCCGATCAAAGCTATATTAGTCCGAATGGATAA
TAATGGAAGCATAAACATGGCGTGTGAAGTTCAAAAGTTTTGTGTTTCGT
TCGTTTCCTGCGCTGTTTCTGGATATGGAATTAATGTTGTTGCTAAATCT
TGGAATCAACATACAATTCCAGgaCGAGGAAAGCCTGCCAATATCAAGGA
AAACACTAACCAACTGCAACCAATAAATCATGCTAATTTACCCGAAGCGC
TTGAGGCGAAACAGGAATATGAAACTCGTTATGCTGGTCAGTTAGTGGAT
GAGCATGCATTTGGTATCGATCCTTTGCAAGGTTTCAATGATCAGAAGGC
ACGGAGATTAGGAGAATTTTCACAGAGATTTCGGATTAAGTCTTTATTTG
AAGATTGCATCAACAACCGACCACAATCCTTTGAAAATGCTGTGTTATTT
TTTATTCGTAAAACGCACGAACTGGTACAAGGCGTCTAGgaCGAGGAAAG
CCTGCCAATATCAAGGAAAACACTAACCAACTGCAACCAATAAATCATGC
TAATTTACCCGAAGCGCTTGAGGCGAAACAGGAATATGAAACTCGTTATG
CTGGTCAGTTAGTGGATGAGCATGCATTTGGTATCGATCCTTTGCAAGGT
TTCAATGATCAGAAGGCACGGAGATTAGGAGAATTTTCACAGAGATTTCG
GATTAAGTCTTTATTTGAAGATTGCATCAACAACCGACCACAATCCTTTG
AAAATGCTGTGTTATTTTTTATTCGTAAAACGCACGAACTGGTACAAGGC
GTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000285_pilon | genome | sc0000285_pilon:77845..80212 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 889-1203:2054 |
| Aaloc | 682-885:1594 |
| Aaloc | 535-681:982 |
| Aaloc | 205-531:500 |
| Aaloc | 1-204:1 |
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