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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:291935..295325- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011469 ID=XLOC_011469|Name=XLOC_011469|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3391bp|location=Sequence derived from alignment at sc0000159_pilon:291935..295325- (Clytia hemisphaerica_ch_hm2_pilon)
TCACCAGTCGAATGTATATTAGAATGTCAAAAAGTATTGACATATGGGTA
TTTTGTTGACACGACAAAAACTTGTTTCTGCATGAAAAATAAAGATCAAA
AGATTTTTTCAATTGAAGATGAAAATCTGAATGGAACGTTTTATCAACAG
GACCAACAGGTATGAGACCAAGGGTACACGTTTTCTTAGTAATTGTTTTT
TACCTGAGGGTGAAGTATGCTTAGGAATTTTCTGAATGTGAGCGGCGTGA
GTTTTCATAAAGAAATCAATGTTCACCACGAAGTAGACTAGTAAACTAGT
CGGTTATTACTTATAACCTGTCAATCAAATAATGTAAACACTAATTAAAT
ATTCAGCGCGCGTGAGAGAAAAGGAAAATAACCGACTAGAAGCTACTTCC
AACGCCTTTTTTTCTTCACCTAAAATCGTAAGGAGAGACATACAGATTTC
TGTATGTCTGACCCGTGCGGGATTGCATTTATTTTTCTTTCTGTTTATTG
CGTTTTTAGAAATGCTCATTTATTTATATGTTCCCACGTTTAATGTTACT
ATGAAATATCATTAAGTCAAAAAAGTTGGATGGATTCTCAAAAACCTAAA
AAAAGTTGTAAAATTAAACAACGTTTTTCGAGGGAAGTAGCTTCTAGTCG
TTGAAATTCAGAAAAGAGACGCAACTTCACCCCTTCGATTCTTTTTATTT
GGAGCTTGATTTTTTGTATATGGGTCTATTTCCAACGACTAGTTTACTAG
TCTACCACGAAGAAAACACGAAGGGATCTGCGATATTTTTCATTTATTAG
TCTGTGGGATGTTTTTACATCATGTTAGCGAAAACATTTCACGTATAATA
TAAACACAACAACTTCTTTTTTATTTTTCCTGCCCTATATTCCTTCGAAA
AATCTAAACGTCGATGTATTTTTAAGATATTCTTGATATTTAGTTGATTT
TCACATCTTGAATATGTTAAAAAAGTACCAACTGGCACGCAACGTTGTTT
CAACGTTCATATAGCGTTATATGGACGTTGTGAACGTTAGATACACCTTT
TTTTAAGAACAATTTTATAAGAACAATGAGGCTCAAAATCGCCAACAAAT
AAGAACAATTTAAGAACATTGCTGAGCCTGAAATTATTCAATTTCAAGCA
ATTTAGTGGTCAAAGTAGTAAAAATTGAATATAGAGCCTAAAAAGCCTCA
AATAAAACCTAAAAATAAGAACAGGATAAGAACAATTTTAGACTCAAAGT
GCCAACAAAATGGGAACAGCCGAATATTAGCAAAAGTTTACTGGTTCTTA
TAGAAAAAGTGTAAACGTCGAAACAACGTTGCGTGCCAGCTTGGAAGGAC
TTCCCAAAGAACAAAAACTTAACTCCGTAAGTAACTGCTGTGAGATTTGA
GCCTGAAGTTAACAATCCATATTCTCATTCATTTTCTTTAGGGTGGTGTT
TGCCCAGATATACAAAGAAAGAGTTGCCGAAAAGTGAAAGAAGACTGCCC
AACAAGCCCATCAGGTTTTTATCACATTGAAATCGATGGTCAAATAGTGA
AGGCGTTTTGTGACTTAGAAGTTGAAGGAGGTAAGATTGCATACAATAAC
GCGTTCTGTATAAGAACGGAGTATAATAAGAACATAAGGCTTAGATAAAG
AATCTAAGAACATTTTAAGGATATTTTTTAAGCTTGCATGTTCATGCTCA
AAATATGCGATTTCTTACGAAATCAGTTAAAAACACAAAAAATTATTCTC
AAAAGAGGAGAACATTTTAGGCATACACTATTTTTCTGTAAGCATAACGT
TTATAAGCATCCCGGGGGGGAGGTGGGGAGGCCAAGCAAAATGACTGACG
GGTATGTGCGGGCACTAAGGGTGTGTTTTTCTAGGTATCCGAAATGCACT
GTAAGGGTGGGTTTTTTGCCGCCTGCACTGTAAGGGTACGAATTTCTAAA
TTCTAACAAAAATGAAATTGTCCAGTCAAAGTTTTTTTAAGGGATTCAAT
CCCTTTACCTAATTTTTTTCATATATTGGATCAAGTACGTATTGGATCCC
TTTTTAGATGCAAAATCTTTGTTTGACCCATTTCAATCACTTCAGGGAAA
AAAGCTAGACTGCACTGTAGGGGTATTCAACATGGCGAAAGATGCACTGT
AAGGGTTTATTTTTTGGGAAAAACCACTGCACTGTAAGGGTGCGATTTTG
AACGCCAATTTTTAGCCCCGCACATACCGTCAGTCCAAAATCTGACTGCC
CCCCCCCCGGGATAAGCATACTTAGGCTCAAACTCAGTAAAAAATAAGCA
TAATGCTAAGCATACCTCCAATAAGCTGAAATGCGAAAAAACTTGTGCAG
CATTTCTAAAACGCTGACCTTTTAGGGTTACTTTTAAAGCTGTTTTTGCT
TTCTTAGATCAAAGATTTTCGCCTGCAGTGCAAAATTACAAAAAAAGGAC
GAAGTCTAAGCATAAATTAAAGGCTGAAAATGAGGTTTTGCTAAACATAC
TGAGCCTCGACTCAATTTTCCCGTATGCTTATAAACAAAAAGAATGTACC
TGGAGGTCCTATAAATTAACTCCTGTTCGTTCAAAATTTTGGATGCTCTT
ATAAAAAACGTGTAATGCCTAAAAAGTGAGTGACAGTACTGCTGACGGAG
CGCCAATTCCGAAAAAAAAATAAAGAAAAGTTGCGTGTCATCATATACAT
TTATTTATAAGAACAAAAATGAATGTTGCCAGAATGATAAGAATATTTTA
AGGCTTTGTGGACTCTGAAACACCCGATTTAACTTCATAAGGCTTTTTAA
GGGCCAAAATACTGAGAACAATTTTAATAACACCCTGGCGAAAAAAATAA
AAAATAAAAAATCATGCTTCAATTCATTTTAGGTGGTTGGCTCGGTATAG
CAAATATCACTTTCAACAATGCAAGTCTTATGCAAACTTATCTTGGCTAC
GTAAATAACGAAGCACCTGTTTCAGACCTCCAAAATATAGGGGATGGGAA
ATTCATGTTGGACGCACAAGTTGTTAAGAGGTTGTTCACTGAACATGGCT
ATACAGAAGTTCGAGGTAAATGCTTCAAAAATTGGCATGGTCGGACGCTG
CATTTTATTTTGTTTGGAGAAGAAACGGTCAAATACATGAGGAAGGAAGA
AATGACGACGCATGGTTCATGCCAAAAGGCCCGATATTTGTCGGACGACA
CATCTTATATGGCTCGAACTGATTGTTCAACAATTCGGATTGGCTATGGG
CTAAGTCATCCTTATCATTATCATTTGCTTTGGAAAGCTGTAACCTATCA
AGTTATGTTGGACAACAGATTTGCATGTGATGATAGTCACTTTTCTAACG
CATTCACTAATACTGGATATTGGCTCTTCTTTGTAAGATAA Coding sequence (CDS) from alignment at sc0000159_pilon:291935..295325- >XLOC_011469 ID=XLOC_011469|Name=XLOC_011469|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1614bp|location=Sequence derived from alignment at sc0000159_pilon:291935..295325- (Clytia hemisphaerica_ch_hm2_pilon)
TCACCAGTCGAATGTATATTAGAATGTCAAAAAGTATTGACATATGGGTA
TTTTGTTGACACGACAAAAACTTGTTTCTGCATGAAAAATAAAGATCAAA
AGATTTTTTCAATTGAAGATGAAAATCTGAATGGAACGTTTTATCAACAG
GACCAACAGTCACCAGTCGAATGTATATTAGAATGTCAAAAAGTATTGAC
ATATGGGTATTTTGTTGACACGACAAAAACTTGTTTCTGCATGAAAAATA
AAGATCAAAAGATTTTTTCAATTGAAGATGAAAATCTGAATGGAACGTTT
TATCAACAGGACCAACAGGGTGGTGTTTGCCCAGATATACAAAGAAAGAG
TTGCCGAAAAGTGAAAGAAGACTGCCCAACAAGCCCATCAGGTTTTTATC
ACATTGAAATCGATGGTCAAATAGTGAAGGCGTTTTGTGACTTAGAAGTT
GAAGGAGGGTGGTGTTTGCCCAGATATACAAAGAAAGAGTTGCCGAAAAG
TGAAAGAAGACTGCCCAACAAGCCCATCAGGTTTTTATCACATTGAAATC
GATGGTCAAATAGTGAAGGCGTTTTGTGACTTAGAAGTTGAAGGAGGTGG
TTGGCTCGGTATAGCAAATATCACTTTCAACAATGCAAGTCTTATGCAAA
CTTATCTTGGCTACGTAAATAACGAAGCACCTGTTTCAGACCTCCAAAAT
ATAGGGGATGGGAAATTCATGTTGGACGCACAAGTTGTTAAGAGGTTGTT
CACTGAACATGGCTATACAGAAGTTCGAGGTAAATGCTTCAAAAATTGGC
ATGGTCGGACGCTGCATTTTATTTTGTTTGGAGAAGAAACGGTCAAATAC
ATGAGGAAGGAAGAAATGACGACGCATGGTTCATGCCAAAAGGCCCGATA
TTTGTCGGACGACACATCTTATATGGCTCGAACTGATTGTTCAACAATTC
GGATTGGCTATGGGCTAAGTCATCCTTATCATTATCATTTGCTTTGGAAA
GCTGTAACCTATCAAGTTATGTTGGACAACAGATTTGCATGTGATGATAG
TCACTTTTCTAACGCATTCACTAATACTGGATATTGGCTCTTCTTTGTAA
GATAAGTGGTTGGCTCGGTATAGCAAATATCACTTTCAACAATGCAAGTC
TTATGCAAACTTATCTTGGCTACGTAAATAACGAAGCACCTGTTTCAGAC
CTCCAAAATATAGGGGATGGGAAATTCATGTTGGACGCACAAGTTGTTAA
GAGGTTGTTCACTGAACATGGCTATACAGAAGTTCGAGGTAAATGCTTCA
AAAATTGGCATGGTCGGACGCTGCATTTTATTTTGTTTGGAGAAGAAACG
GTCAAATACATGAGGAAGGAAGAAATGACGACGCATGGTTCATGCCAAAA
GGCCCGATATTTGTCGGACGACACATCTTATATGGCTCGAACTGATTGTT
CAACAATTCGGATTGGCTATGGGCTAAGTCATCCTTATCATTATCATTTG
CTTTGGAAAGCTGTAACCTATCAAGTTATGTTGGACAACAGATTTGCATG
TGATGATAGTCACTTTTCTAACGCATTCACTAATACTGGATATTGGCTCT
TCTTTGTAAGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:291935..295325 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 307-813:508 |
| Aaloc | 166-303:1951 |
| Aaloc | 7-165:3392 |
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