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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000159_pilon:345818..349035- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011467 ID=XLOC_011467|Name=XLOC_011467|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3218bp|location=Sequence derived from alignment at sc0000159_pilon:345818..349035- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCCGATACTTCGTTTATATGTCCGTCTATTTCTCTTCATTTGATTG
GTCAATACAAAGACACATTGTCATGGCTTCAATCACAACACAGTCGACTA
CAAATACACCTTGGAATACTGAGGGTAAGTTATTGAATTAGGAGCAGGGG
GAGAAATTGCAAATTTCATCAACAAATTTCATCATCAACAACCCCGACCG
AAAGTTATTATACCACCCCTACGTATTCATTTCTCTTTGTGTTTTGCGTA
TAATAACGACAAACAGCTTATAAATAAGCATGCGTTTTAACTTTGTTTTG
AAAATGAAACAATAGATGCGAAGTAGACACTTTCTCTGTGGTAGGGTAAA
TTGGCTTTTTCTAAACCAAAATTACCATAACGTTTAACAATGGACATCCC
TCAATTTATCTAAAACGGCTTCTAGCTGAGAATGGAAGGTACTTATGCTA
AATGGATGGGTACCAATTAGGCGCGAACGGTATGTAAAGGTACCTATTTT
CATATCTCATAAATCTCTGTAAAATTTACAGAAACCAAATCACTAAACTT
GGGGAAAATCTTCTTAATAAAGGCCTAAAAATGTTAAAGAATGTCGATTT
TTGATTTGGGGCATTGGGAAAGACTCGCGGGGATACCTGTCATCTTCAAA
GCCAACACTATTTGGTAATTTGACTTCAAAAGACTGATTTCAATCAATTT
AAGAGACATTGGATACATTATACTCAATTTGCTATTCTACAACATACAGG
TCCTTTTAACTGTACCCTTTAAAGCGATACAAACATGATGCTCAGGCCTC
GACCCTTTTCAGAAGATTTTTATAACTGAAGAAGCTAATCAAATTTCAGA
AAACACTCAAACTTTTCCCACATCACATGACAACAATCAAATGACCAATG
AATTTTAACAACCCAAAATCCTTAAAGCCAAAATACAAAACAAACCAAAT
TCCACTAGAGACACATTACTAAAACAATTAAAACAAATTTAGCGAATAGG
AACCCAATATTTAAAATGAAAAGAGAACTAAACCGAAAGAAAATGGAAAA
AGTATGAAAAGATGAAGAAGCCGAGGTCTGAGATCAGGTGCGGTACCTAG
AGTAAGCATCCCCTGCAAACCGCGAGTCACCCGTCATCTTCCCGAAAGAA
AAGGAGTAGTGTTGTACAACCATGCCTTCTACCAAATTCTAGGTTGTGAT
GTCGATTGGTATCGTTTCAAGGAATCTTGTTATCTTCCTTACAAGCAAGA
ACAATACCACAATGACGCCTCCAAAATCTGTCAGAAACACTCCGCTACTT
TAGCTACCATTTTGGATGAACAGGAAAACCAATTCATAAAAGCATTAGCC
AATCAGTTCTTGAGTTACGGTGAAAGCTGGCTGGGATTGGTTCGTTCGGA
TAGACTGAGTACTATCTTTAAATGGGCAGATGGTCAACAAGTGAGCTATG
AGAGATGGATGTTTAATAAGCCTTCGATTGGTGATGGAGATTGCGTACAA
TTGATCAGTAGTGGGTTCTGGACGAACATCAATTGTTATAATCGATTCTC
TTTCATCTGCAAAAAAGGTTAGTTATTCTACGCTGCCATATCAGTTCAAA
TGTGTATCAAAGGTAAACTTGAACGTGCGTACATCTAAGATTTACCTCGT
TCACTCATTCACACTCGTTTATTTCGACGAATGGTCTTTTCAGAAAAATC
CGTTGAAATGCTAACATTAAAAATTTACCTTAGTCGCATAAAGTATAATA
ATAAAACCTCGATATTAGTAGCGATAGCTACGGTATTAAACTAAGGACTG
GAGTCTCTCAACTCGCTAGTGTGATTAGATGGCTCTGAATACTGAACATA
GCGCAAAGCAAATATAACATCTCTCGTTAAATAACGTTTTTCCTCTTTTT
GTCTACAGATAAGAATCTTCCACCAGCAGAAGATAACCTGGATTTAATCT
TGAACATTTCAATACCTCTATCGTGTGTCTTCATCATGTTTTGTTTCGTG
GCATTCCTTTGTTTCAAAAGTTACAAGGAATTACAGGAAATAAAACAAGA
CAATCTAGACGGAAAGCCGTTCGAACTTATCCAAGCTGCAATGATACTAC
CGATCACGAAAACACCTGATTTGTTGACTTCGAATGGTAAGAATCTATGG
AAAAGCGCATTGGAGCGATTAAAAGCAGAGCAGATTAAGAATAACCCGTT
AAATGAACCACATACATTCTTAGCTCGAGGTTCTTTGAGTAGTATAGTCG
ACGCAGCTCGAAAGAATGGACAGATTGGCGGCAATAGGGCGGCAAATATG
AACACGGATAATTCATTCGCTGATATTGTGAATAGTTTGATGTCAAAAAG
ACGCGATACAACATTCCAAGGTGGTTTGATGGGCTTCCCGATTATTGAGA
ATCCGAATGTTCCAAAGATAGCTGTAGACTCACCAGAACATGATAAACTG
AATAAAGATGCAGAGACTATATCTCAAAGCACTAACAACTCAAGACAAGA
GACTGACCCGAATTTCGATTTTAGTTCAAATGCATCTACCGAGAGCCTGG
ACTCTAATCATAATCCGAAGCCCAGAGATCAGAGTTATTCGTCAGATGAC
AATAGTGCTGATGAGAACACCGACACTCTTAAAAACCATCAGTCAAAATC
TTATAAACCGAATACCAAAAAATTTGTCGAAGTTGTTGTCGAATTATATG
ATGTTCATGAGAAATTAAAACACAAAACCACCACCAATGTTAAGAGGAGA
GAAAGTCACGGAGAAAGTTGTCCGAACTCGAATCACGGAAAAAGAAATTA
CAGACCAGATAATAAACGAAACTCTGTAAACTCGATACAAGACACTAAGT
GTAAACGAGAGTCTGTAAATTGTACATCAGATACGAAACGAGTTTCGCTT
AACTCTAAACCAAACGATCATAGAGATTCTGTATTTTACCGACCAGATAT
TGTGCCAAACACAATAAAATCAAGACCGAGTCAAAATTCGACAAGTTCGA
TAGGCACTAGCGATTCGAATAGCTCTTTGTCAAACGATGGAACGAACTCA
GATATCTTAAGTACCAAACAATTTAGAGATTCGATACGCAAAGAATCTGA
GAAAAGAAAAGAACAATATTTTCCAAATTCTCCGGAAAAGAAACTTCCTC
CGGTAGATTATAATTCGATACCGTTTAAATCGAACGTTGCTGATTATACG
ACTGTAACATTAGTATGA Coding sequence (CDS) from alignment at sc0000159_pilon:345818..349035- >XLOC_011467 ID=XLOC_011467|Name=XLOC_011467|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3618bp|location=Sequence derived from alignment at sc0000159_pilon:345818..349035- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTCCGATACTTCGTTTATATGTCCGTCTATTTCTCTTCATTTGATTG
GTCAATACAAAGACACATTGTCATGGCTTCAATCACAACACAGTCGACTA
CAAATACACCTTGGAATACTGAGGATGTTCCGATACTTCGTTTATATGTC
CGTCTATTTCTCTTCATTTGATTGGTCAATACAAAGACACATTGTCATGG
CTTCAATCACAACACAGTCGACTACAAATACACCTTGGAATACTGAGGGT
TGTGATGTCGATTGGTATCGTTTCAAGGAATCTTGTTATCTTCCTTACAA
GCAAGAACAATACCACAATGACGCCTCCAAAATCTGTCAGAAACACTCCG
CTACTTTAGCTACCATTTTGGATGAACAGGAAAACCAATTCATAAAAGCA
TTAGCCAATCAGTTCTTGAGTTACGGTGAAAGCTGGCTGGGATTGGTTCG
TTCGGATAGACTGAGTACTATCTTTAAATGGGCAGATGGTCAACAAGTGA
GCTATGAGAGATGGATGTTTAATAAGCCTTCGATTGGTGATGGAGATTGC
GTACAATTGATCAGTAGTGGGTTCTGGACGAACATCAATTGTTATAATCG
ATTCTCTTTCATCTGCAAAAAAGGTTGTGATGTCGATTGGTATCGTTTCA
AGGAATCTTGTTATCTTCCTTACAAGCAAGAACAATACCACAATGACGCC
TCCAAAATCTGTCAGAAACACTCCGCTACTTTAGCTACCATTTTGGATGA
ACAGGAAAACCAATTCATAAAAGCATTAGCCAATCAGTTCTTGAGTTACG
GTGAAAGCTGGCTGGGATTGGTTCGTTCGGATAGACTGAGTACTATCTTT
AAATGGGCAGATGGTCAACAAGTGAGCTATGAGAGATGGATGTTTAATAA
GCCTTCGATTGGTGATGGAGATTGCGTACAATTGATCAGTAGTGGGTTCT
GGACGAACATCAATTGTTATAATCGATTCTCTTTCATCTGCAAAAAAGAT
AAGAATCTTCCACCAGCAGAAGATAACCTGGATTTAATCTTGAACATTTC
AATACCTCTATCGTGTGTCTTCATCATGTTTTGTTTCGTGGCATTCCTTT
GTTTCAAAAGTTACAAGGAATTACAGGAAATAAAACAAGACAATCTAGAC
GGAAAGCCGTTCGAACTTATCCAAGCTGCAATGATACTACCGATCACGAA
AACACCTGATTTGTTGACTTCGAATGGTAAGAATCTATGGAAAAGCGCAT
TGGAGCGATTAAAAGCAGAGCAGATTAAGAATAACCCGTTAAATGAACCA
CATACATTCTTAGCTCGAGGTTCTTTGAGTAGTATAGTCGACGCAGCTCG
AAAGAATGGACAGATTGGCGGCAATAGGGCGGCAAATATGAACACGGATA
ATTCATTCGCTGATATTGTGAATAGTTTGATGTCAAAAAGACGCGATACA
ACATTCCAAGGTGGTTTGATGGGCTTCCCGATTATTGAGAATCCGAATGT
TCCAAAGATAGCTGTAGACTCACCAGAACATGATAAACTGAATAAAGATG
CAGAGACTATATCTCAAAGCACTAACAACTCAAGACAAGAGACTGACCCG
AATTTCGATTTTAGTTCAAATGCATCTACCGAGAGCCTGGACTCTAATCA
TAATCCGAAGCCCAGAGATCAGAGTTATTCGTCAGATGACAATAGTGCTG
ATGAGAACACCGACACTCTTAAAAACCATCAGTCAAAATCTTATAAACCG
AATACCAAAAAATTTGTCGAAGTTGTTGTCGAATTATATGATGTTCATGA
GAAATTAAAACACAAAACCACCACCAATGTTAAGAGGAGAGAAAGTCACG
GAGAAAGTTGTCCGAACTCGAATCACGGAAAAAGAAATTACAGACCAGAT
AATAAACGAAACTCTGTAAACTCGATACAAGACACTAAGTGTAAACGAGA
GTCTGTAAATTGTACATCAGATACGAAACGAGTTTCGCTTAACTCTAAAC
CAAACGATCATAGAGATTCTGTATTTTACCGACCAGATATTGTGCCAAAC
ACAATAAAATCAAGACCGAGTCAAAATTCGACAAGTTCGATAGGCACTAG
CGATTCGAATAGCTCTTTGTCAAACGATGGAACGAACTCAGATATCTTAA
GTACCAAACAATTTAGAGATTCGATACGCAAAGAATCTGAGAAAAGAAAA
GAACAATATTTTCCAAATTCTCCGGAAAAGAAACTTCCTCCGGTAGATTA
TAATTCGATACCGTTTAAATCGAACGTTGCTGATTATACGACTGTAACAT
TAGTATGAATAAGAATCTTCCACCAGCAGAAGATAACCTGGATTTAATCT
TGAACATTTCAATACCTCTATCGTGTGTCTTCATCATGTTTTGTTTCGTG
GCATTCCTTTGTTTCAAAAGTTACAAGGAATTACAGGAAATAAAACAAGA
CAATCTAGACGGAAAGCCGTTCGAACTTATCCAAGCTGCAATGATACTAC
CGATCACGAAAACACCTGATTTGTTGACTTCGAATGGTAAGAATCTATGG
AAAAGCGCATTGGAGCGATTAAAAGCAGAGCAGATTAAGAATAACCCGTT
AAATGAACCACATACATTCTTAGCTCGAGGTTCTTTGAGTAGTATAGTCG
ACGCAGCTCGAAAGAATGGACAGATTGGCGGCAATAGGGCGGCAAATATG
AACACGGATAATTCATTCGCTGATATTGTGAATAGTTTGATGTCAAAAAG
ACGCGATACAACATTCCAAGGTGGTTTGATGGGCTTCCCGATTATTGAGA
ATCCGAATGTTCCAAAGATAGCTGTAGACTCACCAGAACATGATAAACTG
AATAAAGATGCAGAGACTATATCTCAAAGCACTAACAACTCAAGACAAGA
GACTGACCCGAATTTCGATTTTAGTTCAAATGCATCTACCGAGAGCCTGG
ACTCTAATCATAATCCGAAGCCCAGAGATCAGAGTTATTCGTCAGATGAC
AATAGTGCTGATGAGAACACCGACACTCTTAAAAACCATCAGTCAAAATC
TTATAAACCGAATACCAAAAAATTTGTCGAAGTTGTTGTCGAATTATATG
ATGTTCATGAGAAATTAAAACACAAAACCACCACCAATGTTAAGAGGAGA
GAAAGTCACGGAGAAAGTTGTCCGAACTCGAATCACGGAAAAAGAAATTA
CAGACCAGATAATAAACGAAACTCTGTAAACTCGATACAAGACACTAAGT
GTAAACGAGAGTCTGTAAATTGTACATCAGATACGAAACGAGTTTCGCTT
AACTCTAAACCAAACGATCATAGAGATTCTGTATTTTACCGACCAGATAT
TGTGCCAAACACAATAAAATCAAGACCGAGTCAAAATTCGACAAGTTCGA
TAGGCACTAGCGATTCGAATAGCTCTTTGTCAAACGATGGAACGAACTCA
GATATCTTAAGTACCAAACAATTTAGAGATTCGATACGCAAAGAATCTGA
GAAAAGAAAAGAACAATATTTTCCAAATTCTCCGGAAAAGAAACTTCCTC
CGGTAGATTATAATTCGATACCGTTTAAATCGAACGTTGCTGATTATACG
ACTGTAACATTAGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000159_pilon | genome | sc0000159_pilon:345818..349035 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1051-1800:751 |
| Aaloc | 502-1050:1309 |
| Aaloc | 127-498:2025 |
| Aaloc | 1-123:3219 |
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