|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:706806..711842- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011398 ID=XLOC_011398|Name=XLOC_011398|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5037bp|location=Sequence derived from alignment at sc0000001_pilon:706806..711842- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCCAGGTGTTATTTTGGAAAGTGGGAAGAAGTACACCCAAACTCCAAC
ATTACCTTTTCTTGTGTCGAATGCTGTATTAGGTATGTGTTTTTTATTTC
AGACTTAAACTATGGGTTTCTAACAATCCTTGCTACCTCGGACATCCAAA
TGTTAGAATTCAAAACAATGAAAAATATTTATTAATTTTTATTATGCAAA
GAATAATTACCTCATTAAATGGATTAGTTTTTTGTAGATCCATTATTTTC
AAGAACTTTGCATTTCCTGTTTTTTTAAATAAATACTTAGATTTGCAAAC
TTTGAAAGAAATGAATTTCTGCAAAAATTAAAAATCTACAATCAATCTGT
ATACAAATTTTTAAAATTTTTTGAACATATCTCAATTCTTGAGCTCTCCA
TGTAAAAAAACATGCATTATTTTTGATGAATTCTTTGTATTTTTAGAAAA
CATCAACCCAGAAAGTGATGAAATAGTTACACTTATTTGCGAGATTAACA
ATACCCAGTATACATTATGTCATTTGCAACACAAAAATGGGCTTTATCAA
TCAGGATTGAGTTTGTCTTACAAAGATGGAGAAACATTATCCTTCTTCAT
CAAAGGAAACACAAATGTTCATTTGACAGGTATTTTTCCAACGTTCAAAT
CATTATTTCATTATCAGAAAGAAGTGACAGCCGATTTTATAACATTGAGC
TCTATCCATCTATCTATCTATCTATATTTTAAGTATCAAAAGGTCCTAAG
ACCCATTATCCATACATACAAATTATAAGATTCAGAAGATTGTAAAAAAT
AAAAAGTGTGTAAAGTATATAAAATGTTAGCGCTAAAGAAGACACAATGA
AATAAATTAACCTAATGAGATTCAATACATAATTATTAAACCGCTTTATT
CTTATGTTATCTTTGGACATCAACACATGTCAAATTTAAGTATGTACTTA
GCACACAATAGACAAACCAAAGAGTTTTGTGTTGATTTTTTTGCTTCAGT
AAAATTGTCAAGAAAGCTTTAAAATAAAATAAAATTATTAGAAATTTATC
AACCATATATACTATGATCTCATCATTAGTTTGCTTTGGTACTTTAGCGG
ATAAAGAAATATTTGGAAAGTGACGGTGGTGATTTTGAGGGGGTGACAAA
TTTTTTTCTAAACATTTTATCACCTGAACAAAACTTTTACCCAATTTTCC
GTAACTAAAATTCAAATCCAAATTTTGTTTGCCTTTTTTAGTCAAAATTA
GCGTTTTAACGTTAAATTACAAGATCTATTTTCGAGCTAGTGAGTGAAGG
CAATCATTTCATTTGGACAATTTAGTCGGTTGGAAGTGACTAAGTTGTAA
ATTTGATGAATTTGAAGTTTTGTTTGGGGAAAAGTGATAAAAATGCCTTC
AGGTGACGAAATTTTTCCCCAAAATTGTTCCTTGACTAATTAAAACTCAG
TTTTTTCCCTGATAAGGTGTCTAAATTTATGTATATTTATTTTTCAGGAA
ATATTCGTGTTGATTTGATGTACCTTTACAATGATTATGAAGATGAAGAT
GAAGATGATGGTAAGTGTACAGTTTGTGTGAGTTTACAACTCCTTAAAGG
GATACATACACTACACAATTGTCAGGATATAGATTAATAATAATATTGCT
AAATGCCACAATCTTTGAAGAAATATATTGAGAATTCCGGTTATTTTGAC
GTTTTTCGAGATTTAAAGTTCGGGCGAAAAAGCCGATTTTGGGCTATCTC
TTTAATTTAATCGAATATTTCAATTTGAGACGGGTAGGCAGACTTACAGG
CTATATTCGGAGCCTTACTGGACCATTTTTGAACTTTTGGATTCTCAGAT
CCTAAGGTGCTAAGTCTTAAGTCTAGCGTTAAAACTCAGAGTTAAAACTC
TACCCTTCGAACCTACTTTAGAGCACTTACAAATCGATTGTGGTTTCAAA
ACTTCCTGGGGAATTTCCCATTTGTTTCAAATATTTCTTGAAGGATTGCA
GCAATATATTGAAAAGGTGTCCCCAATATATTATCAGCTCGATTTGCAAT
ATTCCAGCAATACAGGGGGATTGTTTACAGAAAGAAAATTCATTTTTATA
AATGAGCACCCGTTGTTTACCTTGTACATTACGGTCCGCAAACTATCTTG
TCGAAAATTGCTCACCAATATATTGTGTAGTTTAAGTAGCCCTTTAGGTG
CCTCTTGATATACAATAGCGAGTTTATGTATTCGAGATAAATCAAGGGAG
ACGGTATAAAGCAAAGCTGACACGTCTCCAAAATCACCGTCCACTTCACT
CGACAACGGTAAAAACACCAAAATAACGTCGTCTGTTTAGGTGAGCAAAG
GCGATATAGAGCCGTACATCAACTATCGACTTTGTTTTGTATCATTTCAC
TTACCGTCGCTCTCAATATCCTCTGATACATAAACTCGCTAATATTATAT
CATAGTCACACCATTGATCTCATTTAGTTTAGATATATACGAGCAGGATG
AGTGAGTAATCCTTAATATTCCTACTCTTGGTAATGTTTAGGCTATTAAT
CTCAAATCAACCTTCAAACCATGTTTTCGTAGTTCAAATGGAGAAAATTT
ACTTGCAAGAGGGAAATCATAATACTTTACACTTAACGCCTGTTTTATTT
TTAAACACTGACTTTGTGTGGCAATTAAGAAATTGACAACCTTCCTGGCT
ATTTCAGCAGCTAACAAGTATATTTTTTGTTTTAGATTTTGACTTATTGA
CAGACCCTTACAATCAATTACCAAAACTGAAATCTACAACAAATTATCAG
ACTACACTACCAAACAATGTTAATGGAGGTATTCATTCACAATACAGTTT
TTACAGAATATCTATGTAATAGATTTTAGCACCCCTATCCAATCTTTAAC
TTTACTTAGAATATACTTTTTATATCTCGCAAAATGTTTATTTTCATAGT
TGCATATTAAAGCTTTTAAATGCAAATTTTCGATAGAATTATTAAATTCT
CTTTCTTATTCTGTTTCATCAAGGTACAACTCAAAAAGCTCCCAAAAATG
CACCCTGGGAAGTTACAAAAGTGAAGAAGCTGTCCACGAAAATACCAGCA
AAGAAAAGAACATCACCAGATCAAAGTCCTGAAAACATTGGTGAAATAGT
CTCTCCTGTTAATGTTGATCATGATCAAACTATTGATTTTGCTTCTGCTG
TCAATAAAGTAAAGAAAACAAAAAAGAAAACCACAGCAACAAAACCTACA
AACAAATCAAAAGTTAACAAAATGAACCCCAGTAATGAAGCTACGGAAAA
AGATCAGGATGAAATACCGATAGACTGTCTATTTCAAAACACTGAAGATC
TTTCAACTGATTCTAATGAAACCAAAGTTAAAGAAAACTATCCAGTTATT
AAGACAGCTTCTTCAAATGCAAGTACCAATCGATCGGCTTCTAAGAGCAC
AATGGACTCTGCCGTTAGTAGTGTAAATAGTATTGCTGCAAAGAGCACAA
AGGATTTGACCATCCCGACTTTTTCAAAAGTGTATGTTTGTATTTTTTCC
TTCTTTTACTCATTTCGTTGATTTCTTGCAATATTATACGAATTAGTTAC
ATAGAAATTCACTTTCTAAGGCATATTTCACCTCTTTTTATGTTCTTTTC
AAAACTTTGTCATGAAAATTCATAACCTATAACGAAAACAATAGCAAAGT
TAAGTCCATTGGCTTTAAGTGTACAATAAATGTTTTGCTTACCATTTTTC
AACGAATACTTCAAATTTAACAAATTAATTATACTCCGTTGGAAAGATAA
TTCAGAGCACTAATTTTTGCGAAAGATTAATCTAAAATTTTTTGTTGAAA
TTGAAAAATGAACTTTATTCTTTAGTGCTAGAATTTTCATTTTTGGTACA
GAGGACTTTGATTTAATTTTCTAAAATTTTAAGGTGCTTCTTCACAAAAG
ATTATGTCCTCAATATTATGAATAGCGTAGCTCTTCCATTTAATTTGCTT
TAATAGGAACAGCTTATTACATTTTTCTCTATTTGAAAAATACTTTATTT
TTCCTTTTTAGTTACCATTCACCAAGAAAGATGAGCGTTGACCTTGATAC
TGATGCAGAAGATAAAGAGAAAGAATTCGTCGATGATGAAGACCAAGAAG
AAGATCAAACGGAAAATGATGATGAAGTGGTTGATGAGAACAATGAGGTC
TGTTTTGAGTTGTGATAAGATAAGATCGTCGTATAAGGTTAATAAGGTTC
AGAGAACTTTAAAAGTTATAAAAATGTGATCTGCACATTAAGTTTCCTAA
GTGCGAGAAAATAATGTATCTATGGTTGAAAATAGAAGAGTTTGTTTTAA
ACTACTCAAAGATCCATTTTAATTGGTGAAATTTTCTTTCTAAAAATAAT
TTCGAAAGAATTTTTGATATTCAAAAGATGAGATGATTCTCGAAATATTT
AAAATAATTCTTTTTAAATTGTTGACAAAATTTGAATGCAAAATTTGTTT
CATGCTCGTAATATCAGTGGAATATGTCTTTCATGTCTTTTTAAGAATCA
GCAAATATTACTTTGTAATTAATGCTCTGAAGTAGCTGCTTTTCTCCTAG
AGTCAGACACTCAATCATGACGGAGTTGAAATTCATATGCTTGTTATTTT
TTTGCTCTTCCATTTTTTTATTAGACGGAAAAAGAGGAAGCAATGGAACT
TTCCTCATATGAAGAAATCACAAAATCTTCTGTTGTTGATGGTACCGTCG
AAGAGGAACAAAGCGAAGCGAAAGAGGTATATTATGATAATGAGAGTGGG
TCCTATTTTTAACAAGATTACCCCATTATCCTCGTTGATTCTTGATACGT
GATAACCTTCTTTGGTAATCATTTAGTTTGAGCATCATACCAACTTAATT
TCTCTCCATTTTTGTTTCATTCACAGGAATTTGATTTGGAGGAGAAAGCA
GAGGATGATGAGATGTTGAGTGATATTGATGACGAGAAGAATGATGGAGA
TGAAGAAGGAGAAGATACTGTTGTTGAGGATGTGGAA Coding sequence (CDS) from alignment at sc0000001_pilon:706806..711842- >XLOC_011398 ID=XLOC_011398|Name=XLOC_011398|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2556bp|location=Sequence derived from alignment at sc0000001_pilon:706806..711842- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCCAGGTGTTATTTTGGAAAGTGGGAAGAAGTACACCCAAACTCCAAC
ATTACCTTTTCTTGTGTCGAATGCTGTATTAGTTTCCAGGTGTTATTTTG
GAAAGTGGGAAGAAGTACACCCAAACTCCAACATTACCTTTTCTTGTGTC
GAATGCTGTATTAGAAAACATCAACCCAGAAAGTGATGAAATAGTTACAC
TTATTTGCGAGATTAACAATACCCAGTATACATTATGTCATTTGCAACAC
AAAAATGGGCTTTATCAATCAGGATTGAGTTTGTCTTACAAAGATGGAGA
AACATTATCCTTCTTCATCAAAGGAAACACAAATGTTCATTTGACAGAAA
ACATCAACCCAGAAAGTGATGAAATAGTTACACTTATTTGCGAGATTAAC
AATACCCAGTATACATTATGTCATTTGCAACACAAAAATGGGCTTTATCA
ATCAGGATTGAGTTTGTCTTACAAAGATGGAGAAACATTATCCTTCTTCA
TCAAAGGAAACACAAATGTTCATTTGACAGGAAATATTCGTGTTGATTTG
ATGTACCTTTACAATGATTATGAAGATGAAGATGAAGATGATGGAAATAT
TCGTGTTGATTTGATGTACCTTTACAATGATTATGAAGATGAAGATGAAG
ATGATGATTTTGACTTATTGACAGACCCTTACAATCAATTACCAAAACTG
AAATCTACAACAAATTATCAGACTACACTACCAAACAATGTTAATGGAGA
TTTTGACTTATTGACAGACCCTTACAATCAATTACCAAAACTGAAATCTA
CAACAAATTATCAGACTACACTACCAAACAATGTTAATGGAGGTACAACT
CAAAAAGCTCCCAAAAATGCACCCTGGGAAGTTACAAAAGTGAAGAAGCT
GTCCACGAAAATACCAGCAAAGAAAAGAACATCACCAGATCAAAGTCCTG
AAAACATTGGTGAAATAGTCTCTCCTGTTAATGTTGATCATGATCAAACT
ATTGATTTTGCTTCTGCTGTCAATAAAGTAAAGAAAACAAAAAAGAAAAC
CACAGCAACAAAACCTACAAACAAATCAAAAGTTAACAAAATGAACCCCA
GTAATGAAGCTACGGAAAAAGATCAGGATGAAATACCGATAGACTGTCTA
TTTCAAAACACTGAAGATCTTTCAACTGATTCTAATGAAACCAAAGTTAA
AGAAAACTATCCAGTTATTAAGACAGCTTCTTCAAATGCAAGTACCAATC
GATCGGCTTCTAAGAGCACAATGGACTCTGCCGTTAGTAGTGTAAATAGT
ATTGCTGCAAAGAGCACAAAGGATTTGACCATCCCGACTTTTTCAAAAGT
GTACAACTCAAAAAGCTCCCAAAAATGCACCCTGGGAAGTTACAAAAGTG
AAGAAGCTGTCCACGAAAATACCAGCAAAGAAAAGAACATCACCAGATCA
AAGTCCTGAAAACATTGGTGAAATAGTCTCTCCTGTTAATGTTGATCATG
ATCAAACTATTGATTTTGCTTCTGCTGTCAATAAAGTAAAGAAAACAAAA
AAGAAAACCACAGCAACAAAACCTACAAACAAATCAAAAGTTAACAAAAT
GAACCCCAGTAATGAAGCTACGGAAAAAGATCAGGATGAAATACCGATAG
ACTGTCTATTTCAAAACACTGAAGATCTTTCAACTGATTCTAATGAAACC
AAAGTTAAAGAAAACTATCCAGTTATTAAGACAGCTTCTTCAAATGCAAG
TACCAATCGATCGGCTTCTAAGAGCACAATGGACTCTGCCGTTAGTAGTG
TAAATAGTATTGCTGCAAAGAGCACAAAGGATTTGACCATCCCGACTTTT
TCAAAAGTTTACCATTCACCAAGAAAGATGAGCGTTGACCTTGATACTGA
TGCAGAAGATAAAGAGAAAGAATTCGTCGATGATGAAGACCAAGAAGAAG
ATCAAACGGAAAATGATGATGAAGTGGTTGATGAGAACAATGAGTTACCA
TTCACCAAGAAAGATGAGCGTTGACCTTGATACTGATGCAGAAGATAAAG
AGAAAGAATTCGTCGATGATGAAGACCAAGAAGAAGATCAAACGGAAAAT
GATGATGAAGTGGTTGATGAGAACAATGAGACGGAAAAAGAGGAAGCAAT
GGAACTTTCCTCATATGAAGAAATCACAAAATCTTCTGTTGTTGATGGTA
CCGTCGAAGAGGAACAAAGCGAAGCGAAAGAGACGGAAAAAGAGGAAGCA
ATGGAACTTTCCTCATATGAAGAAATCACAAAATCTTCTGTTGTTGATGG
TACCGTCGAAGAGGAACAAAGCGAAGCGAAAGAGGAATTTGATTTGGAGG
AGAAAGCAGAGGATGATGAGATGTTGAGTGATATTGATGACGAGAAGAAT
GATGGAGATGAAGAAGGAGAAGATACTGTTGTTGAGGATGTGGAAGAATT
TGATTTGGAGGAGAAAGCAGAGGATGATGAGATGTTGAGTGATATTGATG
ACGAGAAGAATGATGGAGATGAAGAAGGAGAAGATACTGTTGTTGAGGAT
GTGGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:706806..711842 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1171-1281:112 |
| Aaloc | 1069-1170:364 |
| Aaloc | 934-1068:976 |
| Aaloc | 427-930:2013 |
| Aaloc | 334-423:2301 |
| Aaloc | 271-330:3539 |
| Aaloc | 88-267:4590 |
| Aaloc | 4-84:5038 |
|
