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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:657999..661962- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011396 ID=XLOC_011396|Name=XLOC_011396|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3964bp|location=Sequence derived from alignment at sc0000001_pilon:657999..661962- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAGAATAAAATACAAAAATTTCATTCTAAGTGTTGTCTCATTATT
TTTGGTTGCTGCATTCATTTTTTCAGGTGAGTCAGGTGAGCTAACTCTTC
GTAAAAAAACCACTAAGAATGACTAGTCACGGCTATAGGCTGCACGCATC
CCCTCTTAATATGTTTTGATATAAGAGATGCATATCGTGTATTAAATAGT
CGTCTAAGAGTTACCCTAGTCTGTAGACAAACCCGATATCTACGGCTTAT
TTCAAAATTCATTGCCGTAGAGGGTATGTTGTCATTGTCTTTTCTGATTT
GAGATTTTTCAAACCGTCGGTAACGTTTCGTTATTTGTTCGTTATTATCA
ACTCTTTTGCTAAAGTCTGTCCAGATATAATTGGCAGTGGAAACAAGAAT
GCCTGTAACTTTTAATAGCCAAATACAATTCCGAAATTTTTTTAGCTTGT
TTTAGAGAATCAAAAGCGCTATATTTGAATGCATTTATGGTTGAAAAATT
CGCGATTTTTAGCGGTTAAATTTGCGATTGCAAAAATTGAGCTTTTTTTC
TACTCATGCTATAACTTTCATTTTTACACCAGTGGTAGTTCAACCTTAGG
TTAAGAAGTTTGTTAAATTTCAAGGCAAACAGAAAAGTCCTTCGGAAGAT
ATGGGACCCGAAATACCCCTTGGTAGCACTTTTCTGTGAAATATCAAATC
TCCAACTTATTACTAAAAACGGGGGTAGTGATAATATTGATAAAACAGTT
TTTCCATCATAACACATTTTACGATCTCTTTAATGACCTCATAGCCAAAC
TGCATTTAGTGTTTTGGGAATTAGCAAAGTTCTTTAGTGACTTAAAAATA
AGAAAGGCAATATAAATTCATGCTTATCTTTTCAATAAAAACAATTATAC
TGTGATTTCACTTCTTTTCGAAATAATCAATGATACCAATAATACCAATG
CACCAACACTTAACATTTTCCAACTTTTAATTGCACTGTTCAAAAATAAA
AACATAACCCCCGTTTTTAGTAATATGTTGGAGATATATTTCACAGAAAA
GTGCTACCAAGGGGTATTTCAGGTCCCATATCTTCCGAAGGAATTTTCTG
TTTGCTTAGAAATTTGACAACCTTCTTTACCTAAAGCTGATTTACCACTG
GTGTAAAAATGAAAGTCAAGCATGAGTAGAAAAAAAGCATAATTTTTACA
ACCGCAAATTTAACCGCTAAAAATCGCGAATTTTTCAACCAAAAATACAT
TCAAATATAGCGCTTTTGATTCTCTAAAACAAGCAAAAAAAATTTCCATA
ATTATATTTGACTATCAAAAGTTACAAGCATTCTTGTTTCCACTGCCAAT
TATATCTGGACAGACTTTAGTATTTCATGTAATGACGTTTTGATTTAAGG
AGGTGATTTTCATCCAAAGATAAAGTTGCAGAGAATCGAAATCGTCTCCA
GAGAAAGGTTAGTAAGAGAATCTCCAAAGCGTAGCTATTTGGTAAAGTTT
AAGAATCACTCATTAAGTGCCACTGGCACCATTATGAGATTACTTATTTT
TTCCGGTCATGTACCGACAGGTTTGGGTCACGACCCACGACACCCTGTTT
TTTTACCCTGCCCGAATAAGTCGAGATCGGCATTTCTTAGTTCGGGTGAA
TTTGAAATTTGAAATGGAAAAACTGATAACATTGAGATTCTAACATACAC
AATATTAATCTGATTCACTTGGAGTTAAAACTCTTCACAAATATCAAGCC
CATATATGATACAATACCAGTAACACGAGGCAATACAATATGTAACAATT
TGAACTTTGTTTTTCAGACGATATTCGTTTCGAAGGGAGAACGCAACATC
AGTTTCCAATTCAATCAAATTATTGGAAAAGGACTTTCAAGACAGATTTC
AACAGTTGGTGGAAAACTTACAAGAAGATGACGAGAGCTATAAGTCATTG
CTCAAAACCACACTCGATGATTACGTAACACAGAAAACGTAAGCACACTG
TAAACATGTTCAAATCTACGGTTTTGTATTGGTCCGAAAACCGACTAATG
GAGCTATCCTATTGGTTAGAAATGACGTTAGTTTAAAAATAAGCCAATAG
AATCGTCTCATTTCGTTTCAATGCGGTAAATAAAACCAGACGTAACGTAT
GGATACGGTCTGAATAAAGCTTGTCGGTCAAAACTGCCTCAGTTCAACGT
CTAGTTCAATTTGTATTATCCAAACTACTCTCCAGAGTCAATATATCAGA
CTTTGAACCGATTTGAACAACTAAAAACTTTGTACTGTAAATATTTTCTT
GAAAGGAACCAAAACGAATTGCCGTTTAGAAGCTAAATGACGACTTTTTT
GAAATGTTGCCTAGTAGTGAAAAGTATTGGAATAATTTGGTCGTGTAGAG
TTCAGATTTCGATCTAAACCATTGAAGGCAATTCTCTGGTATCAAATGTA
ATTATTTTCAAACAAAATTATTCTACTTTTTATAGGTGCACTCCACAACA
AAACATCATATTTCTGAAGACGCATAAAACCGGTAGCAGCACTTTAACCA
ATATTTTGAACAGATATGCTGACATCAACAACTTGAGAATGTTAATACCA
TCAGGGAAGCAAAACCGTTTTGATTGGCCAAATAAGTTCACACCCTTTAG
TGCAGATGTAAGACTGCTTGGACCAGAGACAAAGGCTAATATGTTAGTCA
ACCATGCAAGGTATTGAATAGGCAAAGAAATACTTAGCCAATAATTTTGC
GTTTTCAGGAAACACCCGTCTCACAATATATATTACCAACAATGATTCTC
GATTTTTAAAGGTCCTAACCGTCTTGATATTTACAATTCCGTTAGTAAAA
TGAGATTGAAAATCTAGGGTGATCCAAAAAATGAGAAGCAAAAAAATCCA
ACGGAGTCCTGAAAAATGTGAAAAAATCAAGGAATCACCTTTCCCAAAAT
AGACCTCCTCAACATAGGAGGTACAACTTTTTTCTGAAATAGTTCAATAC
CGGTCAGCGATATGCTAAGACCTGAGACACCCAAATTTAAGTCATTCAAT
ATGAAATTGCATTATTTGACATCCCAAATATTTATTGCATTTTTAGATTC
AGCAAAGAATCCATGCAACAAATGATTTCAAAGCCAACCAAATTCATCAC
AATCTTACGAAACCCGGTCACTCAATTTGATAGTCTATTTCACTATGAAG
GTTTTGACAAACTTTTATCCATCCAACGAAAATATCGTGCCATGGATATC
TTCTTATCTTCGCCGAAACATTATTATCAGAGGTTACTGCGTAAGAGAGA
AACACCTGAAGCTTTACCTCTTCTACGAAACAGCATGCTCTACGATCTTG
GTTTCACCTTTCATGAGCGGCCACGCGGTGATGATTCGGACGCGCGTGTT
GGAAAAGCGATTCAAAAGATAGACGAGACTTTTGATATGGTTTTATTGAT
GGATTATTTTGATGAAAGTTTAGTACTTTTAATGAACGAACTTTGTTGGG
GATTTGAGGATATTATCTATATGAAGCACAATGTAAGAGCGAAGCGGAAA
AACGTTTCCACTAAAACCGCTGACAGAATTCGAAAATGGAATTCTGCAGA
CTGGGAACTTTATAAGCATTTCAACAAAACATTTTGGAATAAAATTCAAA
AGTACGGGTCTGCAAAGTTCGCAAAAGACTTACGAGAATTTCGCGAGAGA
AATAATGAACTTGTTAAGAATTGTCAAATTAAAAGTGAGGATACATTACC
CCCCTTTTCAACAGTGAAACAGTATAAATTAGGGGGCAATGTTAGACAAG
AATACCAATCACTATGTGAGAAAATACTTTTATCAGAAGTTGAATATTTA
CAGAGGTTTCGTGACCAATATGAACTTGAATTTAAGAAGAGTTCAAAGAA
CGATAGTAGCCGCGTGCAACGAGAAATACTATCGAGAATGCAAAACCTGG
TACCGGAATTCTAA Coding sequence (CDS) from alignment at sc0000001_pilon:657999..661962- >XLOC_011396 ID=XLOC_011396|Name=XLOC_011396|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2796bp|location=Sequence derived from alignment at sc0000001_pilon:657999..661962- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAGAATAAAATACAAAAATTTCATTCTAAGTGTTGTCTCATTATT
TTTGGTTGCTGCATTCATTTTTTCAGATGTCAAGAATAAAATACAAAAAT
TTCATTCTAAGTGTTGTCTCATTATTTTTGGTTGCTGCATTCATTTTTTC
AGGAGGTGATTTTCATCCAAAGATAAAGTTGCAGAGAATCGAAATCGTCT
CCAGAGAAAGGAGGTGATTTTCATCCAAAGATAAAGTTGCAGAGAATCGA
AATCGTCTCCAGAGAAAGACGATATTCGTTTCGAAGGGAGAACGCAACAT
CAGTTTCCAATTCAATCAAATTATTGGAAAAGGACTTTCAAGACAGATTT
CAACAGTTGGTGGAAAACTTACAAGAAGATGACGAGAGCTATAAGTCATT
GCTCAAAACCACACTCGATGATTACGTAACACAGAAAACACGATATTCGT
TTCGAAGGGAGAACGCAACATCAGTTTCCAATTCAATCAAATTATTGGAA
AAGGACTTTCAAGACAGATTTCAACAGTTGGTGGAAAACTTACAAGAAGA
TGACGAGAGCTATAAGTCATTGCTCAAAACCACACTCGATGATTACGTAA
CACAGAAAACGTGCACTCCACAACAAAACATCATATTTCTGAAGACGCAT
AAAACCGGTAGCAGCACTTTAACCAATATTTTGAACAGATATGCTGACAT
CAACAACTTGAGAATGTTAATACCATCAGGGAAGCAAAACCGTTTTGATT
GGCCAAATAAGTTCACACCCTTTAGTGCAGATGTAAGACTGCTTGGACCA
GAGACAAAGGCTAATATGTTAGTCAACCATGCAAGGTGCACTCCACAACA
AAACATCATATTTCTGAAGACGCATAAAACCGGTAGCAGCACTTTAACCA
ATATTTTGAACAGATATGCTGACATCAACAACTTGAGAATGTTAATACCA
TCAGGGAAGCAAAACCGTTTTGATTGGCCAAATAAGTTCACACCCTTTAG
TGCAGATGTAAGACTGCTTGGACCAGAGACAAAGGCTAATATGTTAGTCA
ACCATGCAAGATTCAGCAAAGAATCCATGCAACAAATGATTTCAAAGCCA
ACCAAATTCATCACAATCTTACGAAACCCGGTCACTCAATTTGATAGTCT
ATTTCACTATGAAGGTTTTGACAAACTTTTATCCATCCAACGAAAATATC
GTGCCATGGATATCTTCTTATCTTCGCCGAAACATTATTATCAGAGGTTA
CTGCGTAAGAGAGAAACACCTGAAGCTTTACCTCTTCTACGAAACAGCAT
GCTCTACGATCTTGGTTTCACCTTTCATGAGCGGCCACGCGGTGATGATT
CGGACGCGCGTGTTGGAAAAGCGATTCAAAAGATAGACGAGACTTTTGAT
ATGGTTTTATTGATGGATTATTTTGATGAAAGTTTAGTACTTTTAATGAA
CGAACTTTGTTGGGGATTTGAGGATATTATCTATATGAAGCACAATGTAA
GAGCGAAGCGGAAAAACGTTTCCACTAAAACCGCTGACAGAATTCGAAAA
TGGAATTCTGCAGACTGGGAACTTTATAAGCATTTCAACAAAACATTTTG
GAATAAAATTCAAAAGTACGGGTCTGCAAAGTTCGCAAAAGACTTACGAG
AATTTCGCGAGAGAAATAATGAACTTGTTAAGAATTGTCAAATTAAAAGT
GAGGATACATTACCCCCCTTTTCAACAGTGAAACAGTATAAATTAGGGGG
CAATGTTAGACAAGAATACCAATCACTATGTGAGAAAATACTTTTATCAG
AAGTTGAATATTTACAGAGGTTTCGTGACCAATATGAACTTGAATTTAAG
AAGAGTTCAAAGAACGATAGTAGCCGCGTGCAACGAGAAATACTATCGAG
AATGCAAAACCTGGTACCGGAATTCTAAATTCAGCAAAGAATCCATGCAA
CAAATGATTTCAAAGCCAACCAAATTCATCACAATCTTACGAAACCCGGT
CACTCAATTTGATAGTCTATTTCACTATGAAGGTTTTGACAAACTTTTAT
CCATCCAACGAAAATATCGTGCCATGGATATCTTCTTATCTTCGCCGAAA
CATTATTATCAGAGGTTACTGCGTAAGAGAGAAACACCTGAAGCTTTACC
TCTTCTACGAAACAGCATGCTCTACGATCTTGGTTTCACCTTTCATGAGC
GGCCACGCGGTGATGATTCGGACGCGCGTGTTGGAAAAGCGATTCAAAAG
ATAGACGAGACTTTTGATATGGTTTTATTGATGGATTATTTTGATGAAAG
TTTAGTACTTTTAATGAACGAACTTTGTTGGGGATTTGAGGATATTATCT
ATATGAAGCACAATGTAAGAGCGAAGCGGAAAAACGTTTCCACTAAAACC
GCTGACAGAATTCGAAAATGGAATTCTGCAGACTGGGAACTTTATAAGCA
TTTCAACAAAACATTTTGGAATAAAATTCAAAAGTACGGGTCTGCAAAGT
TCGCAAAAGACTTACGAGAATTTCGCGAGAGAAATAATGAACTTGTTAAG
AATTGTCAAATTAAAAGTGAGGATACATTACCCCCCTTTTCAACAGTGAA
ACAGTATAAATTAGGGGGCAATGTTAGACAAGAATACCAATCACTATGTG
AGAAAATACTTTTATCAGAAGTTGAATATTTACAGAGGTTTCGTGACCAA
TATGAACTTGAATTTAAGAAGAGTTCAAAGAACGATAGTAGCCGCGTGCA
ACGAGAAATACTATCGAGAATGCAAAACCTGGTACCGGAATTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:657999..661962 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 532-1398:868 |
| Aaloc | 307-528:1479 |
| Aaloc | 136-303:2147 |
| Aaloc | 79-132:2564 |
| Aaloc | 1-75:3965 |
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