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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:725500..731427+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011391 ID=XLOC_011391|Name=XLOC_011391|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5928bp|location=Sequence derived from alignment at sc0000001_pilon:725500..731427+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGAAGTACGCCACCGAACCAGAAAACCCAACCAAGTCATGCAAGGC
TCGTGGCTCATACTTGCGTGTTCACTTTAAGAACACACGGGAAACAGCCC
AAGCCATCAAAAAGATGCACATCCGTAAAGCTTACAGATATCTGAAGGAT
GTTATCGCTCAAAAACAAATTGTTCCATTCAGACGCTTCAGTGGAGGTGT
TGGACGTAAAGCTCAGGTGAGATATCAAGACTAAATTTCTTAATTCTTTA
AATCTTACAGCTCACACTTGATTTACACAGAAAGAAGAGTGTGAAAAACA
ATGAGATGTCAAAACTGGGAATGATGTGAAATTGTCGaagcaaaatattg
aattttcaaatggaGCTTATAATagtatcaaatttgtgacatggAAGCTT
GAATAACAGGAGATAGATACTTAAACTGGAAATGATTTTTGTCTAAATCA
taatattgttattgattggCCTACACGTTATGTTGTTGGATGGAGAATGC
ATTGAACCTTTCTACAAGTGAAACATTGGTTTAGCAAAGAATCAAGTAGC
ATGATGTATAAAGTATTGCTTATGGATTATAAATGCtcttcattttgaaa
ttgtttatctattgctggAAGTTTGTCATCGCCAATAAAAGCCTGTAACA
GTGGAACTGCATTATTGTTATCAATTAAACTTACTGTTTCTTGTTGTGTT
GAGCTGGTTGATTTTGTTGATCTTGTTTTAAGTGAAGTTTTTCatgcttt
cagtggagtttgtggacgaaattggctgaaaagttttttgtccCAATACT
TATATTTTATCGGTATGTAGCCCAATGCTGATAAAATATTTGTAAGtttt
tttGTTGAGGGTCccctattctcaacttcagttgagctagaatctgagaa
tgtctgtgtgtgtgtctgtgtgcctgtcaccaaaactttggggcaggctg
gagacttcaaaaattgggctgaaattttgcacacttgatccttgggcaaa
tccctgggggtgtctttttcattttttcaaaatttatttttggggcctgg
ggacgtgttttttcgccaaaacgaggctaaaactttggggcaggctggag
acttcaaaaatggtccgatttggctgaaattttgcacacttgatccttag
gcaaatccctgggggtgtttttttcattttttcaaaattttaatttttgc
ggcctggggacgagtttttcgccaaaacaaggctaaaactttggggcagg
ctggagacttcaaaaatggtccgattaggctgaaatttcgcacacttgat
ccttgggcaaatccctgggggtgtttttttaattttttcaaaatttaatt
tttggggcctggggatgagtttttcgccaaaGCGAGGATAAAACTTaagg
gcaggctggagactcaaaaatggtccgaattggctgaaattttgcacact
tgatccttgggcaaatccctgggggtgtttttttcattttttcaaaattt
tgatttttggggcctggggacaagttttaagcctaaacgaggctaaaacc
caaagtgcaataatttttcttaagccatcGAGTTAACAATTGGGCCTaca
aatgatttcaaagatactgaagttgagccagtgcggttagcacgttcgac
agttatGCATCCAGGATGGGATTCctgttcttttaaaataactGAAGATT
CTCTGTCGGATGCAAATATCATATTTGAAACTAGTTTGATGCTGCTTCAC
ATCAATTGATTCAGCAATAGGGTTTCAAGACATTTTCAGTTGATAGAATG
GTACATACTTGATCATGGTACATACCTGATAATTGTGGGTTTTCAGCATT
TGATACCaacattttttgggaaaaatatttcagggtggtataatatcaaa
aatagaaaaaaccaACAGAGACAAATTGGTGGAAAGCAACAAAATAATGT
GCATGCGACTGTTTTGTTGATTGGAAAAGGTGTATTGGGTGGGAGTACGA
AGACTGAAAGTTGAAGCCAGTGAAAagctaaattttattaaattaaggAA
ATGTTCAAATCTTTTCTTGTTATTTCAGTTGGTTTGAGGGGGAACTAAAg
cttttaaaacttaaaaatcacAGTTTTATTGTGTGTTTCCAGGCCACAAA
ATTGCCAGGTCTGAAGACATGTTTTTGTGGCCAAGTAACTTTTTGGCCCT
TCATTTTGCCCGGAAACCAGAGTATGCTAAATCTGTGGGGTTTGaggttt
tcatgaattttgaagaAGTTCTCAAGCAGGCAGTACTGCAGTTCCTTGGC
AGATATTCTTGATTAGGTTCACTTCACCTTATTTTCTGCGTGCTGCAATG
CAATATCCCTTAACATGGGCTaaaaaaaTATTGGACAAATAAGCAATAGA
AACTCTATGCTAATCCCTTCCtgttttaaaagtgttttttccAATTCAGG
AAGAAGTTACTGACCTGTGCCAGTCGCAGGAAAGAGGATTGCTaaattga
aattactaaaatttgACCTGGGTCTATAAATTTTGTTATTATTAACTGTT
AAATGATTATGTTAACTCTAACGGTcatactttttattttcaggctAAAG
CATTTGGTCATTCTCAAGGTAGATGGCCAAAAAAGAGTGCAACATTCTTA
TTGCAACTTTTAAAGAATGCTGAAAGCAATGCCGATGTTAAGGTAAATCA
TCGCAATTTTCCCTAATCCTTAACAAATTATATGAACTCtggcaatattt
tcaaatgCATTGTGGTATCTCCATTGCTTTCTACAATAAAGTTCTGGTCG
TTTAACCAATGCTATATCAATATCCAAAGTGTCACATCATCGTTTGGTAC
TGTTGACTTCTACAACTTTATCATGGAATGACATGGGACATGCTATTAGA
AATCTTTCTGATAATTTCatcaaaactcaaatttttTAAGAGTAGAGGCT
TCTGAAAGTCACCAACAGAAGAATTAGACAAACAAACATAAAATTGTGGT
GTCATCATATGCAAGTTTTATAATCATTTGAACTCATTAAAAACATCTTA
AAATACATTTTAACCAATTTTGATGTTTCTTATATTTAGGGATTAGATGT
CGACTCCCTTGTCATCGACCATATTCAAGTAAACAGAGCTCCATACATGA
GAAGGCGAACATACCGTGCTCACGGTCGTATTAACCGTAAGTATCATTTG
TGttgtaaagtctgtctcaaaataatttgcagtcgcgacaaaaaaggcta
taacttttgatagaattcgaattagacaggggttttgtgcttgttgaaaa
gacaaacaggagtggaatattatcataaaggaaaaaaaattcgaaaaata
ttgaaaatgaaggagaagaaaatcaacttcttgtagaataatgcaatgat
tttgatttttatatcaGAAATTCTTTACTCTTAGAACGtcaaaaatacgt
caaaaatgttcaatcagtcaaaaaaatacAGCTCAAAACTTTGCCCTGGT
TGACTTtaaaaagggctcttttttgttgtttttttgatgattttttaagt
CAATCAGTAATAAACTTTGGACTATATCTTTCGTTGGaataaatttcttt
ggaaaatcttttaacATTAATGATGTTCTAAAGATCAAGAATATTGCTAA
TTGATAATTAAagcacaattattgaagaagttgattttcttcttcttcat
tttcaatcttcatttttcaatttttttcgagttttttctCTATGATAGTA
TTCCAttcctgtttgtcttttcaaaaagcacaaaaccgctatctaattaG
AATTCGCTCAAAAGTTATAGCtttttttGTCTcggctgcaaattattttg
agacttTAGAGTGTTATTGGACAGTCCAAAGTCTGTTGAAGTATTCGTGA
AAATCCAAAACCAAAAGTGATTTTCTTATTGCGGTCTGAGGTCTTTGATA
AAGGAAAGGGATGGTGcttaaaattaaaagtttttctaataaatgctccc
gtttcatatcaggacagtggcTGCCTATTGTTGTATTATGTTTATACgag
caaaaaagtttttcttttcctctttctgaccaatcttgctccacgtTCGT
GTCAATTTCATGTGAAAAAGCTTACGATTTAAAAttaagtaagcaaacga
tatatcactcttatttaaaaacaaaacatttaaagggaatagcgctatac
ttatagtaggggtcggaGTTGCTGGTActtccatggtatactctgaaata
catgctgatgtcagcccgaaagctgattggcttaaccgacAGTTTTACGT
GGTTTGagagtatagctaaaactttgttatgttttcaacagtaaacgaaa
gtgaatgaagacaaaatgtaaacaaaaagattgcaaagaagttttcgaat
aaattcacaatagaatgtcttcatttaaaaatagaaacactcgatttcat
tcaaaagaaaaagacattctttttttctttcagttttatataagtctttt
tgtgttgttgttgaacattatagtaaattatattcacttttttgaatata
tttttggacctacctccgggtaccccggtggaggttctataaattaaccc
atgtccgttcgtctgttcgtctgttcgtccgtccgtctgttaccagcttt
tctcaggattggctcattagttttttctgattttttgcacaatgatgcaa
aatcgcaatgcccagaacgtgacggagcccgatttttgagaaaaaattta
tttgggcaaatttgggccaaaaactacctaaaaatagggttttttggact
ttgtgcaaaatcctgtcattacttttttctgattttttgtacaaagatgg
agggcaagattctctaaagaatggctgaagtggtttttcccggaaaattc
ttattcgccttaaaaacggattttcgtatttttggggaaattccctttaa
ccaaataagaaaatatagcttttctcaaagttaactcattatttttttgt
gattttttgcacaacgatgcaaaatggcaatgcctagaatgtgtcggagc
ccgattttcgaaaaaaaatatatttgggcaaatttgggccaaaaactgcc
taaaaatagggtttttggactttgtgcaaaatcctgtcattacttttttc
tgattttttgtacaaagatggagggcaagattctctaaagaatggctgaa
gtggtttttcccggaaaattcttattcgccttaaaagatggattttcgta
ttttggggaaattccctttaaccaaataagaaaatatagcttttctcaat
gttgactcataatttttttctgattttttgcacaatgatgcaaaatggca
atgcccaaaatgtgaaggagccagatttttaaggaaaatttttttgggca
aatttgggccaaaaccagcttaaaaggttttttgggcctgaatggtttaa
gtgattttcgtatttggggaaattcctttttaccattttacattattcaa
cacacaagctttatttttccattctgaatttttgtacaattattgtcact
tttttcttattttcatctgatgttaatcattaggtaggtccattcagcat
gttgcttgtttggaataaagtcacttttggtctttgttatgatccagcac
tcctaaatactcctccgtatgggtgtttgtgccaatgctagatcagcatt
tcataaatataccatgcgtcgttccctttaaGTGACATTTCATTGCGATT
TAAAGTCAACAACTAACATGAACGCTTTCTTTTTTCAGCATACATGTCGA
GTCCATGCCACGTTGAAATGATCTTATCTGAAAAAGAACAAGTTGTTCCA
CGTGCCGAGGAAGAGGTGGAAGTCAAGAAAGTCTCCAAGAAGAAGCTTGC
CCGTGAAAAACTTAAAGCTCGCGAATAA Coding sequence (CDS) from alignment at sc0000001_pilon:725500..731427+ >XLOC_011391 ID=XLOC_011391|Name=XLOC_011391|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1104bp|location=Sequence derived from alignment at sc0000001_pilon:725500..731427+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGAAGTACGCCACCGAACCAGAAAACCCAACCAAGTCATGCAAGGC
TCGTGGCTCATACTTGCGTGTTCACTTTAAGAACACACGGGAAACAGCCC
AAGCCATCAAAAAGATGCACATCCGTAAAGCTTACAGATATCTGAAGGAT
GTTATCGCTCAAAAACAAATTGTTCCATTCAGACGCTTCAGTGGAGGTGT
TGGACGTAAAGCTCAGATGACGAAGTACGCCACCGAACCAGAAAACCCAA
CCAAGTCATGCAAGGCTCGTGGCTCATACTTGCGTGTTCACTTTAAGAAC
ACACGGGAAACAGCCCAAGCCATCAAAAAGATGCACATCCGTAAAGCTTA
CAGATATCTGAAGGATGTTATCGCTCAAAAACAAATTGTTCCATTCAGAC
GCTTCAGTGGAGGTGTTGGACGTAAAGCTCAGgctAAAGCATTTGGTCAT
TCTCAAGGTAGATGGCCAAAAAAGAGTGCAACATTCTTATTGCAACTTTT
AAAGAATGCTGAAAGCAATGCCGATGTTAAGgctAAAGCATTTGGTCATT
CTCAAGGTAGATGGCCAAAAAAGAGTGCAACATTCTTATTGCAACTTTTA
AAGAATGCTGAAAGCAATGCCGATGTTAAGGGATTAGATGTCGACTCCCT
TGTCATCGACCATATTCAAGTAAACAGAGCTCCATACATGAGAAGGCGAA
CATACCGTGCTCACGGTCGTATTAACCGGATTAGATGTCGACTCCCTTGT
CATCGACCATATTCAAGTAAACAGAGCTCCATACATGAGAAGGCGAACAT
ACCGTGCTCACGGTCGTATTAACCCATACATGTCGAGTCCATGCCACGTT
GAAATGATCTTATCTGAAAAAGAACAAGTTGTTCCACGTGCCGAGGAAGA
GGTGGAAGTCAAGAAAGTCTCCAAGAAGAAGCTTGCCCGTGAAAAACTTA
AAGCTCGCGAATAACATACATGTCGAGTCCATGCCACGTTGAAATGATCT
TATCTGAAAAAGAACAAGTTGTTCCACGTGCCGAGGAAGAGGTGGAAGTC
AAGAAAGTCTCCAAGAAGAAGCTTGCCCGTGAAAAACTTAAAGCTCGCGA
ATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:725500..731427 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 415-552:5791 |
| Aaloc | 316-411:3090 |
| Aaloc | 217-315:2594 |
| Aaloc | 1-216:1 |
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