|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:679482..680808+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_011388 ID=XLOC_011388|Name=XLOC_011388|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1327bp|location=Sequence derived from alignment at sc0000001_pilon:679482..680808+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAATACAATGATTGTCTTGATAAACAGAGTGTTGAAGAACCTGA
GATTATTCTTGGGAATGAGGGCTCAAATGAAGATAGTCATGATATTCATC
TTAGCAATGATGAAGATCATAATGAATCCCAAGGATCAACTGAAAACAAA
GGACCAAGCCATTATAATAACATTCATCACAAAGATAAAGCTGTCTCGGT
ATCATGTCAAAACTCTGAAGATTTATCCAAAAATCGAATTTTAACTACTC
CTCCAATTAGCGACTCTGAAAGCATGATAGAGGATCAAAACCTAAGTACT
GACGATAATGACTCAAAAACAAttatttctgaaaatttgactCAGAGTCT
ATCAAATAACTGTCAAGATTCTAAAACTTCGCTGTTTAACGGTTCACCAT
CAGATGATACTGAGGACGCAGATACACCCCAAAATGTTTGTCGAATCTGT
TATGGAAATGACGAGGAAGAGCAGCTTGTAGCTCCATGTAAATGCCTAGG
AACTGTTCAATATATGCACGAATCATGTCTTTTAACGTGGCTTAAGTCTG
GTGCCACCCATTGTGAACTTTGTAAAACTAATTATAACTTCAAGAGGATA
TTGAAACCATACTCTGAggtaattttcatatttttgcatGATTCATCTTT
GTTTATGATTTGCAAGTATGCTGTATGCAAAATGTTGTGTATGTGTATAC
AAACCTTTTTACATATTTCAGACAAATTATACCCTTCGTAAACGAAAAGT
GCACGTATATAAAAAACTCTTTAGTCGATTTTCGATTGATTTGGGTCATA
GGCCACTATAACTTTTTAACCTTATAACCTTTATAAAGGCAAATACCTAA
ATATTGGTCATcatgaaatcaatttttgattgcTAACACCCATTATTTTT
GTGTTCCATATAGCGCAAATGGCCGAATGTTAGATCTTGGCATATTGGTT
GGATAGTCAAAGAACTTGTTTTGCTTGACTGGTTTCATTTCCTGGAAACT
GTTTTATGTTGCATCACTCTGATGTTGATCAATCGCATGGCATCTTACGA
TTTAGTATATCAATTCGCGCTGATTGCACTCTTCGAACTATTTTATTATG
GGCTGAACATTTGGAGTTGCTTTTATTTACTGTTCTATACAAGATGGTCT
GCCTTGAATCTTGAAGTTCATGTTTTGAATTACAATTGCGATGAAGATCA
AACATCTTATCGGAAATTCTCAGACTTTCTTATATCTGGTCTTGAAAGTT
ACGCATCTTTGCTGAGAAAGAACCGTAGACTAAGAATGGTTGTTAATTCT
ATCGAGGAGCATGATTTTGCTGCATGA Coding sequence (CDS) from alignment at sc0000001_pilon:679482..680808+ >XLOC_011388 ID=XLOC_011388|Name=XLOC_011388|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2064bp|location=Sequence derived from alignment at sc0000001_pilon:679482..680808+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGAATACAATGATTGTCTTGATAAACAGAGTGTTGAAGAACCTGA
GATTATTCTTGGGAATGAGGGCTCAAATGAAGATAGTCATGATATTCATC
TTAGCAATGATGAAGATCATAATGAATCCCAAGGATCAACTGAAAACAAA
GGACCAAGCCATTATAATAACATTCATCACAAAGATAAAGCTGTCTCGGT
ATCATGTCAAAACTCTGAAGATTTATCCAAAAATCGAATTTTAACTACTC
CTCCAATTAGCGACTCTGAAAGCATGATAGAGGATCAAAACCTAAGTACT
GACGATAATGACTCAAAAACAAttatttctgaaaatttgactCAGAGTCT
ATCAAATAACTGTCAAGATTCTAAAACTTCGCTGTTTAACGGTTCACCAT
CAGATGATACTGAGGACGCAGATACACCCCAAAATGTTTGTCGAATCTGT
TATGGAAATGACGAGGAAGAGCAGCTTGTAGCTCCATGTAAATGCCTAGG
AACTGTTCAATATATGCACGAATCATGTCTTTTAACGTGGCTTAAGTCTG
GTGCCACCCATTGTGAACTTTGTAAAACTAATTATAACTTCAAGAGGATA
TTGAAACCATACTCTGAgATGGCAGAATACAATGATTGTCTTGATAAACA
GAGTGTTGAAGAACCTGAGATTATTCTTGGGAATGAGGGCTCAAATGAAG
ATAGTCATGATATTCATCTTAGCAATGATGAAGATCATAATGAATCCCAA
GGATCAACTGAAAACAAAGGACCAAGCCATTATAATAACATTCATCACAA
AGATAAAGCTGTCTCGGTATCATGTCAAAACTCTGAAGATTTATCCAAAA
ATCGAATTTTAACTACTCCTCCAATTAGCGACTCTGAAAGCATGATAGAG
GATCAAAACCTAAGTACTGACGATAATGACTCAAAAACAAttatttctga
aaatttgactCAGAGTCTATCAAATAACTGTCAAGATTCTAAAACTTCGC
TGTTTAACGGTTCACCATCAGATGATACTGAGGACGCAGATACACCCCAA
AATGTTTGTCGAATCTGTTATGGAAATGACGAGGAAGAGCAGCTTGTAGC
TCCATGTAAATGCCTAGGAACTGTTCAATATATGCACGAATCATGTCTTT
TAACGTGGCTTAAGTCTGGTGCCACCCATTGTGAACTTTGTAAAACTAAT
TATAACTTCAAGAGGATATTGAAACCATACTCTGAgCGCAAATGGCCGAA
TGTTAGATCTTGGCATATTGGTTGGATAGTCAAAGAACTTGTTTTGCTTG
ACTGGTTTCATTTCCTGGAAACTGTTTTATGTTGCATCACTCTGATGTTG
ATCAATCGCATGGCATCTTACGATTTAGTATATCAATTCGCGCTGATTGC
ACTCTTCGAACTATTTTATTATGGGCTGAACATTTGGAGTTGCTTTTATT
TACTGTTCTATACAAGATGGTCTGCCTTGAATCTTGAAGTTCATGTTTTG
AATTACAATTGCGATGAAGATCAAACATCTTATCGGAAATTCTCAGACTT
TCTTATATCTGGTCTTGAAAGTTACGCATCTTTGCTGAGAAAGAACCGTA
GACTAAGAATGGTTGTTAATTCTATCGAGGAGCATGATTTTGCTGCATGA
CGCAAATGGCCGAATGTTAGATCTTGGCATATTGGTTGGATAGTCAAAGA
ACTTGTTTTGCTTGACTGGTTTCATTTCCTGGAAACTGTTTTATGTTGCA
TCACTCTGATGTTGATCAATCGCATGGCATCTTACGATTTAGTATATCAA
TTCGCGCTGATTGCACTCTTCGAACTATTTTATTATGGGCTGAACATTTG
GAGTTGCTTTTATTTACTGTTCTATACAAGATGGTCTGCCTTGAATCTTG
AAGTTCATGTTTTGAATTACAATTGCGATGAAGATCAAACATCTTATCGG
AAATTCTCAGACTTTCTTATATCTGGTCTTGAAAGTTACGCATCTTTGCT
GAGAAAGAACCGTAGACTAAGAATGGTTGTTAATTCTATCGAGGAGCATG
ATTTTGCTGCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:679482..680808 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 619-1032:914 |
| Aaloc | 388-618:388 |
| Aaloc | 175-387:172 |
| Aaloc | 1-171:1 |
|
